Composite table

Parvoviridae


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 29.54 Ser AGA 0 TCT 12.97 Tyr ATA 0 TAT 14.41 Cys ACA 0 TGT 9.37 T
GAA 0 TTC 10.09 GGA 0 TCC 13.69 GTA 0 TAC 22.33 GCA 0 TGC 10.09 C
Leu TAA 0 TTA 2.88 TGA 0 TCA 4.32 ochre TTA 0 TAA 1.44 opal Sec TCA 0 TGA 0.00 A
CAA 0 TTG 15.85 CGA 0 TCG 12.25 amber CTA 0 TAG 0.00 Trp CCA 0 TGG 23.05 G
C Leu AAG 0 CTT 6.48 Pro AGG 0 CCT 16.57 His ATG 0 CAT 9.37 Arg ACG 0 CGT 4.32 T
GAG 0 CTC 18.73 GGG 0 CCC 28.10 GTG 0 CAC 11.53 GCG 0 CGC 5.04 C
TAG 0 CTA 4.32 TGG 0 CCA 7.20 Gln TTG 0 CAA 24.50 TCG 0 CGA 10.81 A
CAG 0 CTG 24.50 CGG 0 CCG 14.41 CTG 0 CAG 26.66 CCG 0 CGG 2.16 G
A Ile AAT 0 ATT 23.78 Thr AGT 0 ACT 7.93 Asn ATT 0 AAT 25.94 Ser ACT 0 AGT 4.32 T
GAT 0 ATC 16.57 GGT 0 ACC 31.70 GTT 0 AAC 40.35 GCT 0 AGC 18.01 C
TAT 0 ATA 2.16 TGT 0 ACA 9.37 Lys TTT 0 AAA 25.94 Arg TCT 0 AGA 10.81 A
Met CAT 0 ATG 18.73 CGT 0 ACG 16.57 CTT 0 AAG 41.07 CCT 0 AGG 4.32 G
G Val AAC 0 GTT 6.48 Ala AGC 0 GCT 18.73 Asp ATC 0 GAT 15.85 Gly ACC 0 GGT 7.20 T
GAC 0 GTC 23.05 GGC 0 GCC 25.22 GTC 0 GAC 43.95 GCC 0 GGC 15.13 C
TAC 0 GTA 8.65 TGC 0 GCA 5.04 Glu TTC 0 GAA 31.70 TCC 0 GGA 35.30 A
CAC 0 GTG 18.73 CGC 0 GCG 14.41 CTC 0 GAG 25.94 CCC 0 GGG 10.09 G



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