Composite table

Poxviridae


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 5.38 Ser AGA 0 TCT 3.87 Tyr ATA 0 TAT 1.78 Cys ACA 0 TGT 3.46 T
GAA 0 TTC 37.59 GGA 0 TCC 20.05 GTA 0 TAC 25.70 GCA 0 TGC 20.37 C
Leu TAA 0 TTA 1.48 TGA 0 TCA 2.14 ochre TTA 0 TAA 0.91 opal Sec TCA 0 TGA 1.13 A
CAA 0 TTG 4.89 CGA 0 TCG 21.09 amber CTA 0 TAG 1.18 Trp CCA 0 TGG 6.94 G
C Leu AAG 0 CTT 4.70 Pro AGG 0 CCT 4.10 His ATG 0 CAT 2.33 Arg ACG 0 CGT 3.52 T
GAG 0 CTC 34.76 GGG 0 CCC 20.92 GTG 0 CAC 21.13 GCG 0 CGC 53.05 C
TAG 0 CTA 3.72 TGG 0 CCA 3.24 Gln TTG 0 CAA 2.51 TCG 0 CGA 5.39 A
CAG 0 CTG 44.51 CGG 0 CCG 22.60 CTG 0 CAG 19.47 CCG 0 CGG 17.16 G
A Ile AAT 0 ATT 2.89 Thr AGT 0 ACT 3.88 Asn ATT 0 AAT 2.87 Ser ACT 0 AGT 2.76 T
GAT 0 ATC 27.83 GGT 0 ACC 21.39 GTT 0 AAC 29.34 GCT 0 AGC 21.85 C
TAT 0 ATA 5.34 TGT 0 ACA 3.98 Lys TTT 0 AAA 5.54 Arg TCT 0 AGA 3.04 A
Met CAT 0 ATG 28.03 CGT 0 ACG 23.65 CTT 0 AAG 28.83 CCT 0 AGG 4.20 G
G Val AAC 0 GTT 4.81 Ala AGC 0 GCT 5.10 Asp ATC 0 GAT 5.54 Gly ACC 0 GGT 3.54 T
GAC 0 GTC 24.45 GGC 0 GCC 36.87 GTC 0 GAC 51.00 GCC 0 GGC 35.10 C
TAC 0 GTA 4.62 TGC 0 GCA 6.02 Glu TTC 0 GAA 7.96 TCC 0 GGA 6.03 A
CAC 0 GTG 52.00 CGC 0 GCG 58.63 CTC 0 GAG 49.73 CCC 0 GGG 12.11 G



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