Home | tRNADB-CE : tRNA gene database curated manually by experts

Composite table

Saccharibacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 24.61 Ser AGA 0 TCT 8.41 Tyr ATA 0 TAT 19.83 Cys ACA 0 TGT 3.91 T
GAA 1 TTC 10.68 GGA 1 TCC 4.11 GTA 1 TAC 14.49 GCA 1 TGC 2.91 C
Leu TAA 1 TTA 7.70 TGA 1 TCA 12.82 ochre TTA 0 TAA 1.53 opal Sec TCA 0 TGA 0.64 A
CAA 1 TTG 13.08 CGA 1 TCG 10.65 amber CTA 0 TAG 1.22 Trp CCA 1 TGG 11.29 G
C Leu AAG 0 CTT 20.65 Pro AGG 0 CCT 8.69 His ATG 0 CAT 11.89 Arg ACG 0 CGT 15.03 T
GAG 1 CTC 25.29 GGG 1 CCC 8.80 GTG 1 CAC 10.39 GCG 1 CGC 15.24 C
TAG 1 CTA 11.05 TGG 1 CCA 13.18 Gln TTG 1 CAA 18.73 TCG 1 CGA 10.17 A
CAG 1 CTG 14.70 CGG 1 CCG 10.34 CTG 1 CAG 19.39 CCG 1 CGG 6.48 G
A Ile AAT 0 ATT 25.16 Thr AGT 0 ACT 14.22 Asn ATT 0 AAT 19.54 Ser ACT 0 AGT 15.55 T
GAT 1 ATC 27.73 GGT 1 ACC 17.56 GTT 1 AAC 17.21 GCT 1 AGC 15.39 C
TAT 0 ATA 11.87 TGT 1 ACA 18.05 Lys TTT 1 AAA 29.14 Arg TCT 1 AGA 5.01 A
Met CAT 3 ATG 22.96 CGT 1 ACG 16.15 CTT 1 AAG 22.03 CCT 1 AGG 3.96 G
G Val AAC 0 GTT 20.30 Ala AGC 0 GCT 20.48 Asp ATC 0 GAT 34.14 Gly ACC 0 GGT 25.25 T
GAC 1 GTC 21.72 GGC 1 GCC 21.92 GTC 1 GAC 22.67 GCC 2 GGC 22.22 C
TAC 1 GTA 16.01 TGC 1 GCA 27.13 Glu TTC 1 GAA 28.69 TCC 1 GGA 13.76 A
CAC 0 GTG 18.10 CGC 0 GCG 20.09 CTC 1 GAG 28.26 CCC 1 GGG 9.82 G



BACK