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Composite table

Synergistetes


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 15.87 Ser AGA 0 TCT 6.95 Tyr ATA 0 TAT 11.51 Cys ACA 0 TGT 3.93 T
GAA 7 TTC 24.07 GGA 6 TCC 16.38 GTA 6 TAC 16.79 GCA 6 TGC 9.74 C
Leu TAA 6 TTA 5.99 TGA 6 TCA 4.84 ochre TTA 0 TAA 1.17 opal Sec TCA 5 TGA 1.14 A
CAA 6 TTG 12.89 CGA 6 TCG 12.98 amber CTA 0 TAG 0.88 Trp CCA 6 TGG 12.22 G
C Leu AAG 2 CTT 19.82 Pro AGG 0 CCT 7.97 His ATG 0 CAT 6.89 Arg ACG 6 CGT 6.33 T
GAG 4 CTC 25.76 GGG 6 CCC 16.34 GTG 6 CAC 10.05 GCG 0 CGC 18.98 C
TAG 6 CTA 4.39 TGG 6 CCA 4.39 Gln TTG 6 CAA 7.06 TCG 5 CGA 3.67 A
CAG 6 CTG 32.61 CGG 6 CCG 15.72 CTG 6 CAG 19.82 CCG 6 CGG 9.77 G
A Ile AAT 0 ATT 12.22 Thr AGT 0 ACT 5.55 Asn ATT 0 AAT 9.85 Ser ACT 0 AGT 3.94 T
GAT 5 ATC 27.32 GGT 5 ACC 17.99 GTT 6 AAC 20.37 GCT 6 AGC 15.40 C
TAT 0 ATA 21.49 TGT 5 ACA 6.18 Lys TTT 6 AAA 22.72 Arg TCT 6 AGA 7.91 A
Met CAT 19 ATG 27.51 CGT 6 ACG 16.90 CTT 9 AAG 29.03 CCT 6 AGG 14.33 G
G Val AAC 0 GTT 12.44 Ala AGC 0 GCT 13.04 Asp ATC 0 GAT 19.90 Gly ACC 0 GGT 10.78 T
GAC 6 GTC 27.42 GGC 6 GCC 38.87 GTC 7 GAC 32.48 GCC 7 GGC 35.84 C
TAC 6 GTA 10.93 TGC 5 GCA 10.76 Glu TTC 6 GAA 30.53 TCC 6 GGA 18.02 A
CAC 6 GTG 25.00 CGC 6 GCG 31.09 CTC 7 GAG 38.36 CCC 5 GGG 18.89 G



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