Home | tRNADB-CE : tRNA gene database curated manually by experts

Composite table

Verrucomicrobia


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 17.31 Ser AGA 0 TCT 5.44 Tyr ATA 0 TAT 11.99 Cys ACA 0 TGT 3.01 T
GAA 13 TTC 23.39 GGA 12 TCC 18.52 GTA 13 TAC 15.52 GCA 14 TGC 8.02 C
Leu TAA 12 TTA 5.17 TGA 12 TCA 4.57 ochre TTA 0 TAA 1.09 opal Sec TCA 0 TGA 1.35 A
CAA 13 TTG 14.04 CGA 11 TCG 11.23 amber CTA 0 TAG 0.55 Trp CCA 12 TGG 14.86 G
C Leu AAG 4 CTT 13.04 Pro AGG 0 CCT 7.36 His ATG 0 CAT 9.46 Arg ACG 12 CGT 9.19 T
GAG 9 CTC 31.63 GGG 12 CCC 18.21 GTG 12 CAC 12.30 GCG 1 CGC 30.27 C
TAG 11 CTA 3.57 TGG 13 CCA 5.63 Gln TTG 13 CAA 12.70 TCG 3 CGA 4.72 A
CAG 13 CTG 33.15 CGG 12 CCG 20.12 CTG 12 CAG 21.40 CCG 12 CGG 12.34 G
A Ile AAT 0 ATT 16.97 Thr AGT 0 ACT 6.46 Asn ATT 0 AAT 13.52 Ser ACT 0 AGT 5.46 T
GAT 20 ATC 32.91 GGT 12 ACC 24.43 GTT 13 AAC 20.05 GCT 12 AGC 14.95 C
TAT 0 ATA 4.68 TGT 12 ACA 6.93 Lys TTT 13 AAA 22.21 Arg TCT 13 AGA 3.43 A
Met CAT 37 ATG 21.82 CGT 12 ACG 17.95 CTT 15 AAG 21.89 CCT 12 AGG 4.41 G
G Val AAC 0 GTT 11.28 Ala AGC 0 GCT 12.75 Asp ATC 0 GAT 22.68 Gly ACC 0 GGT 12.16 T
GAC 12 GTC 24.02 GGC 13 GCC 45.89 GTC 14 GAC 29.31 GCC 18 GGC 39.51 C
TAC 13 GTA 6.31 TGC 20 GCA 12.54 Glu TTC 16 GAA 32.88 TCC 12 GGA 14.03 A
CAC 11 GTG 25.90 CGC 11 GCG 31.57 CTC 10 GAG 26.65 CCC 12 GGG 13.31 G



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