This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTEP] metagenome; soil
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180021548
FTEP01000470
[FTEP] metagenome; soil
71
-1
-
Val
GAC
[ENA]
¢þ
>WENV180021546
FTEP01000434
[FTEP] metagenome; soil
85
169
+
Leu
GAG
[ENA]
¢þ
>WENV180021555
FTEP01000520
[FTEP] metagenome; soil
97
10
-
Leu
CAA
[ENA]
¢þ
>WENV180021545
FTEP01000383
[FTEP] metagenome; soil
144
68
-
Arg
TCG
[ENA]
¢þ
>WENV180021538
FTEP01000037
[FTEP] metagenome; soil
443
518
+
Lys
TTT
[ENA]
¢þ
>WENV180021542
FTEP01000273
[FTEP] metagenome; soil
1230
1303
+
Gly
CCC
[ENA]
¢þ
>WENV180021539
FTEP01000094
[FTEP] metagenome; soil
1733
1806
+
Gln
CTG
[ENA]
¢þ
>WENV180021544
FTEP01000375
[FTEP] metagenome; soil
1888
1812
-
Arg
CCG
[ENA]
¢þ
>WENV180021543
FTEP01000374
[FTEP] metagenome; soil
2235
2309
+
Val
CAC
[ENA]
¢þ
>WENV180021540
FTEP01000265
[FTEP] metagenome; soil
2609
2525
-
Leu
TAG
[ENA]
¢þ
>WENV180021552
FTEP01000482
[FTEP] metagenome; soil
2896
2972
+
Arg
ACG
[ENA]
¢þ
>WENV180021541
FTEP01000272
[FTEP] metagenome; soil
2966
2882
-
Leu
CAG
[ENA]
¢þ
>WENV180021553
FTEP01000514
[FTEP] metagenome; soil
3601
3676
+
Gly
GCC
[ENA]
¢þ
>WENV180021554
FTEP01000514
[FTEP] metagenome; soil
3772
3845
+
Cys
GCA
[ENA]
¢þ
>WENV180021549
FTEP01000477
[FTEP] metagenome; soil
4474
4559
+
Tyr
GTA
[ENA]
¢þ
>WENV180021550
FTEP01000477
[FTEP] metagenome; soil
4670
4743
+
Gly
TCC
[ENA]
¢þ
>WENV180021547
FTEP01000462
[FTEP] metagenome; soil
4775
4700
-
Glu
TTC
[ENA]
¢þ
>WENV180021551
FTEP01000477
[FTEP] metagenome; soil
4803
4878
+
Thr
GGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK