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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180225674
OBBO01000006
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
2
72
+
Gly
TCC
[ENA]
¢þ
>WENV180225743
OBBO01000240
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
59
131
+
Val
TAC
[ENA]
¢þ
>WENV180225758
OBBO01003124
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
64
150
+
Leu
CAG
[ENA]
¢þ
>WENV180225757
OBBO01003027
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
64
153
+
Ser
GCT
[ENA]
¢þ
>WENV180225751
OBBO01000762
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
75
-1
-
Asp
GTC
[ENA]
¢þ
>WENV180225718
OBBO01000062
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
79
155
+
Ile
GAT
[ENA]
¢þ
>WENV180225756
OBBO01002571
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
86
11
-
His
GTG
[ENA]
¢þ
>WENV180225675
OBBO01000006
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
86
159
+
Ile
GAT
[ENA]
¢þ
>WENV180225753
OBBO01001908
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
95
171
+
Arg
TCT
[ENA]
¢þ
>WENV180225749
OBBO01000669
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
113
188
+
Asn
GTT
[ENA]
¢þ
>WENV180225752
OBBO01000860
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
115
191
+
fMet
CAT
[ENA]
¢þ
>WENV180225759
OBBO01003296
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
122
46
-
Asp
GTC
[ENA]
¢þ
>WENV180225761
OBBO01003619
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
125
52
-
Asn
GTT
[ENA]
¢þ
>WENV180225744
OBBO01000240
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
134
206
+
Asp
GTC
[ENA]
¢þ
>WENV180225760
OBBO01003463
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
142
65
-
Phe
GAA
[ENA]
¢þ
>WENV180225719
OBBO01000062
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
163
236
+
Glu
TTC
[ENA]
¢þ
>WENV180225723
OBBO01000074
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
164
235
+
Arg
CCG
[ENA]
¢þ
>WENV180225748
OBBO01000664
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
170
95
-
Trp
CCA
[ENA]
¢þ
>WENV180225676
OBBO01000006
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
173
246
+
Glu
TTC
[ENA]
¢þ
>WENV180225754
OBBO01001908
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
176
251
+
His
GTG
[ENA]
¢þ
>WENV180225742
OBBO01000167
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
179
96
-
Leu
CAA
[ENA]
¢þ
>WENV180225750
OBBO01000762
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
187
112
-
fMet
CAT
[ENA]
¢þ
>WENV180225745
OBBO01000240
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
209
281
+
Lys
TTT
[ENA]
¢þ
>WENV180225755
OBBO01002571
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
218
142
-
Arg
CCG
[ENA]
¢þ
>WENV180225717
OBBO01000058
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
227
157
-
Cys
GCA
[ENA]
¢þ
>WENV180225741
OBBO01000167
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
261
190
-
Gln
TTG
[ENA]
¢þ
>WENV180225746
OBBO01000240
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
290
373
+
Leu
TAG
[ENA]
¢þ
>WENV180225740
OBBO01000167
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
341
267
-
His
GTG
[ENA]
¢þ
>WENV180225747
OBBO01000240
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
382
456
+
Thr
TGT
[ENA]
¢þ
>WENV180225739
OBBO01000167
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
425
355
-
Trp
CCA
[ENA]
¢þ
>WENV180225692
OBBO01000020
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
483
557
+
Val
TAC
[ENA]
¢þ
>WENV180225738
OBBO01000167
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
512
432
-
Tyr
GTA
[ENA]
¢þ
>WENV180225693
OBBO01000020
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
562
636
+
Lys
TTT
[ENA]
¢þ
>WENV180225694
OBBO01000020
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
651
734
+
Leu
TAG
[ENA]
¢þ
>WENV180225695
OBBO01000020
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
740
815
+
Thr
TGT
[ENA]
¢þ
>WENV180225737
OBBO01000112
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
785
709
-
Arg
TCT
[ENA]
¢þ
>WENV180225696
OBBO01000020
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
820
891
+
Gly
GCC
[ENA]
¢þ
>WENV180225697
OBBO01000020
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
907
992
+
Leu
TAA
[ENA]
¢þ
>WENV180225698
OBBO01000020
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
1007
1080
+
Arg
ACG
[ENA]
¢þ
>WENV180225699
OBBO01000020
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
1092
1165
+
Pro
TGG
[ENA]
¢þ
>WENV180225703
OBBO01000047
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
1483
1409
-
Gln
TTG
[ENA]
¢þ
>WENV180225702
OBBO01000047
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
1568
1488
-
Tyr
GTA
[ENA]
¢þ
>WENV180225736
OBBO01000096
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
1599
1673
+
Ala
TGC
[ENA]
¢þ
>WENV180225735
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
4875
4786
-
Ser
GCT
[ENA]
¢þ
>WENV180225734
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
4962
4887
-
Ile
GAT
[ENA]
¢þ
>WENV180225733
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5069
4997
-
Gly
TCC
[ENA]
¢þ
>WENV180225732
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5160
5088
-
Phe
GAA
[ENA]
¢þ
>WENV180225731
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5237
5162
-
fMet
CAT
[ENA]
¢þ
>WENV180225730
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5336
5247
-
Ser
TGA
[ENA]
¢þ
>WENV180225729
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5426
5351
-
Ile2
CAT
[ENA]
¢þ
>WENV180225728
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5519
5444
-
Met
CAT
[ENA]
¢þ
>WENV180225727
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5608
5533
-
Pro
TGG
[ENA]
¢þ
>WENV180225726
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5688
5615
-
Arg
ACG
[ENA]
¢þ
>WENV180225725
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5784
5700
-
Leu
TAA
[ENA]
¢þ
>WENV180225724
OBBO01000088
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
5864
5793
-
Gly
GCC
[ENA]
¢þ
>WENV180225722
OBBO01000069
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
7568
7495
-
Asn
GTT
[ENA]
¢þ
>WENV180225721
OBBO01000069
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
7670
7597
-
Glu
TTC
[ENA]
¢þ
>WENV180225720
OBBO01000069
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
7860
7935
+
Arg
TCT
[ENA]
¢þ
>WENV180225716
OBBO01000054
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
10070
10155
+
Leu
AAG
[ENA]
¢þ
>WENV180225715
OBBO01000049
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
15522
15435
-
Ser
GGA
[ENA]
¢þ
>WENV180225701
OBBO01000046
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
22368
22438
+
Thr
GGT
[ENA]
¢þ
>WENV180225714
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
30997
30912
-
Leu
CAA
[ENA]
¢þ
>WENV180225713
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31080
31010
-
Cys
GCA
[ENA]
¢þ
>WENV180225712
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31178
31105
-
Gln
TTG
[ENA]
¢þ
>WENV180225711
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31264
31191
-
His
GTG
[ENA]
¢þ
>WENV180225710
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31374
31301
-
Trp
CCA
[ENA]
¢þ
>WENV180225709
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31460
31378
-
Tyr
GTA
[ENA]
¢þ
>WENV180225708
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31537
31465
-
Phe
GAA
[ENA]
¢þ
>WENV180225707
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31658
31583
-
Asp
GTC
[ENA]
¢þ
>WENV180225706
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31742
31668
-
Val
TAC
[ENA]
¢þ
>WENV180225705
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31841
31768
-
Glu
TTC
[ENA]
¢þ
>WENV180225704
OBBO01000048
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
31947
31857
-
Ser
GGA
[ENA]
¢þ
>WENV180225672
OBBO01000004
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
36879
36804
-
Arg
CCT
[ENA]
¢þ
>WENV180225680
OBBO01000009
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
38409
38331
-
His
GTG
[ENA]
¢þ
>WENV180225700
OBBO01000023
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
55058
54987
-
Arg
CCT
[ENA]
¢þ
>WENV180225651
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
56100
56188
+
Ser
GCT
[ENA]
¢þ
>WENV180225685
OBBO01000017
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
80149
80222
+
Gln
TTG
[ENA]
¢þ
>WENV180225686
OBBO01000017
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
80229
80303
+
Glu
TTC
[ENA]
¢þ
>WENV180225670
OBBO01000004
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
86219
86294
+
Arg
TCT
[ENA]
¢þ
>WENV180225691
OBBO01000018
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
87793
87720
-
Gly
TCC
[ENA]
¢þ
>WENV180225690
OBBO01000018
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
87882
87797
-
Leu
TAA
[ENA]
¢þ
>WENV180225689
OBBO01000018
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
88017
87943
-
Lys
TTT
[ENA]
¢þ
>WENV180225688
OBBO01000018
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
88159
88085
-
Gln
TTG
[ENA]
¢þ
>WENV180225687
OBBO01000018
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
88248
88165
-
Tyr
GTA
[ENA]
¢þ
>WENV180225683
OBBO01000010
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
88966
88893
-
Gln
TTG
[ENA]
¢þ
>WENV180225682
OBBO01000010
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
89056
88974
-
Tyr
GTA
[ENA]
¢þ
>WENV180225684
OBBO01000014
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
92913
92985
+
Lys
CTT
[ENA]
¢þ
>WENV180225681
OBBO01000010
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
100387
100301
-
Leu
GAG
[ENA]
¢þ
>WENV180225673
OBBO01000005
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
107827
107899
+
Thr
GGT
[ENA]
¢þ
>WENV180225650
OBBO01000002
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
116489
116417
-
Thr
CGT
[ENA]
¢þ
>WENV180225652
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
132767
132842
+
Trp
CCA
[ENA]
¢þ
>WENV180225679
OBBO01000009
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
135419
135343
-
Ile
GAT
[ENA]
¢þ
>WENV180225677
OBBO01000006
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
152944
153018
+
Lys
CTT
[ENA]
¢þ
>WENV180225653
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
153580
153654
+
Asn
GTT
[ENA]
¢þ
>WENV180225654
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
153779
153854
+
Val
TAC
[ENA]
¢þ
>WENV180225655
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
153856
153931
+
Thr
TGT
[ENA]
¢þ
>WENV180225656
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
154003
154078
+
Lys
CTT
[ENA]
¢þ
>WENV180225657
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
154083
154166
+
Leu
TAG
[ENA]
¢þ
>WENV180225669
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
166650
166576
-
Sup
TCA
[ENA]
¢þ
>WENV180225658
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
169229
169305
+
Arg
TCT
[ENA]
¢þ
>WENV180225659
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
169385
169461
+
Arg
TCG
[ENA]
¢þ
>WENV180225678
OBBO01000009
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
171885
171812
-
Gly
GCC
[ENA]
¢þ
>WENV180225660
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
174480
174554
+
Cys
GCA
[ENA]
¢þ
>WENV180225661
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
174558
174634
+
Arg
ACG
[ENA]
¢þ
>WENV180225662
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
174682
174758
+
Pro
TGG
[ENA]
¢þ
>WENV180225663
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
174763
174839
+
Met
CAT
[ENA]
¢þ
>WENV180225664
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
174842
174919
+
Ile2
CAT
[ENA]
¢þ
>WENV180225665
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
174988
175080
+
Ser
TGA
[ENA]
¢þ
>WENV180225666
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
175138
175214
+
fMet
CAT
[ENA]
¢þ
>WENV180225667
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
175294
175369
+
Phe
GAA
[ENA]
¢þ
>WENV180225671
OBBO01000004
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
279381
279454
+
Arg
CCG
[ENA]
¢þ
>WENV180225668
OBBO01000003
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
280873
280954
+
Leu
CAA
[ENA]
¢þ
>WENV180225649
OBBO01000002
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
373591
373502
-
Ser
CGA
[ENA]
¢þ
>WENV180225648
OBBO01000002
[OBBO] human gut metagenome; Infant 2 DOL 5 gut
393334
393263
-
Trp
CCA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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