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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OBHZ] human gut metagenome; Vulva exsudate
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180280539
OBHZ01009126
[OBHZ] human gut metagenome; Vulva exsudate
35
110
+
Gly
GCC
[ENA]
¢þ
>WENV180280544
OBHZ01013446
[OBHZ] human gut metagenome; Vulva exsudate
65
149
+
Leu
TAG
[ENA]
¢þ
>WENV180280538
OBHZ01008966
[OBHZ] human gut metagenome; Vulva exsudate
75
148
+
Gly
CCC
[ENA]
¢þ
>WENV180280546
OBHZ01033256
[OBHZ] human gut metagenome; Vulva exsudate
76
2
-
Gln
TTG
[ENA]
¢þ
>WENV180280545
OBHZ01016112
[OBHZ] human gut metagenome; Vulva exsudate
92
168
+
Met
CAT
[ENA]
¢þ
>WENV180280537
OBHZ01007435
[OBHZ] human gut metagenome; Vulva exsudate
101
25
-
Pro
GGG
[ENA]
¢þ
>WENV180280483
OBHZ01000006
[OBHZ] human gut metagenome; Vulva exsudate
105
179
+
Asn
GTT
[ENA]
¢þ
>WENV180280536
OBHZ01006955
[OBHZ] human gut metagenome; Vulva exsudate
113
28
-
Leu
GAG
[ENA]
¢þ
>WENV180280541
OBHZ01009507
[OBHZ] human gut metagenome; Vulva exsudate
114
25
-
Ser
GGA
[ENA]
¢þ
>WENV180280533
OBHZ01002972
[OBHZ] human gut metagenome; Vulva exsudate
133
43
-
Ser
TGA
[ENA]
¢þ
>WENV180280540
OBHZ01009472
[OBHZ] human gut metagenome; Vulva exsudate
151
226
+
Glu
TTC
[ENA]
¢þ
>WENV180280531
OBHZ01002038
[OBHZ] human gut metagenome; Vulva exsudate
152
76
-
Val
GAC
[ENA]
¢þ
>WENV180280532
OBHZ01002235
[OBHZ] human gut metagenome; Vulva exsudate
161
85
-
Pro
GGG
[ENA]
¢þ
>WENV180280542
OBHZ01009582
[OBHZ] human gut metagenome; Vulva exsudate
183
258
+
Thr
TGT
[ENA]
¢þ
>WENV180280543
OBHZ01011382
[OBHZ] human gut metagenome; Vulva exsudate
188
113
-
Ala
GGC
[ENA]
¢þ
>WENV180280535
OBHZ01004060
[OBHZ] human gut metagenome; Vulva exsudate
206
282
+
Ile2
CAT
[ENA]
¢þ
>WENV180280499
OBHZ01000080
[OBHZ] human gut metagenome; Vulva exsudate
209
284
+
Lys
TTT
[ENA]
¢þ
>WENV180280534
OBHZ01003373
[OBHZ] human gut metagenome; Vulva exsudate
284
360
+
Arg
CCT
[ENA]
¢þ
>WENV180280525
OBHZ01001249
[OBHZ] human gut metagenome; Vulva exsudate
304
220
-
Leu
CAA
[ENA]
¢þ
>WENV180280514
OBHZ01000713
[OBHZ] human gut metagenome; Vulva exsudate
348
421
+
Gly
CCC
[ENA]
¢þ
>WENV180280512
OBHZ01000642
[OBHZ] human gut metagenome; Vulva exsudate
396
321
-
Trp
CCA
[ENA]
¢þ
>WENV180280530
OBHZ01001804
[OBHZ] human gut metagenome; Vulva exsudate
419
343
-
Ile2
CAT
[ENA]
¢þ
>WENV180280524
OBHZ01001192
[OBHZ] human gut metagenome; Vulva exsudate
475
550
+
Asn
GTT
[ENA]
¢þ
>WENV180280528
OBHZ01001609
[OBHZ] human gut metagenome; Vulva exsudate
482
557
+
Phe
GAA
[ENA]
¢þ
>WENV180280521
OBHZ01000836
[OBHZ] human gut metagenome; Vulva exsudate
505
429
-
fMet
CAT
[ENA]
¢þ
>WENV180280515
OBHZ01000764
[OBHZ] human gut metagenome; Vulva exsudate
637
724
+
Ser
TGA
[ENA]
¢þ
>WENV180280520
OBHZ01000836
[OBHZ] human gut metagenome; Vulva exsudate
652
566
-
Leu
GAG
[ENA]
¢þ
>WENV180280513
OBHZ01000693
[OBHZ] human gut metagenome; Vulva exsudate
719
794
+
Asn
GTT
[ENA]
¢þ
>WENV180280511
OBHZ01000642
[OBHZ] human gut metagenome; Vulva exsudate
729
643
-
Cys
GCA
[ENA]
¢þ
>WENV180280516
OBHZ01000764
[OBHZ] human gut metagenome; Vulva exsudate
731
806
+
Thr
TGT
[ENA]
¢þ
>WENV180280510
OBHZ01000514
[OBHZ] human gut metagenome; Vulva exsudate
748
672
-
Pro
TGG
[ENA]
¢þ
>WENV180280501
OBHZ01000277
[OBHZ] human gut metagenome; Vulva exsudate
830
906
+
Asp
GTC
[ENA]
¢þ
>WENV180280517
OBHZ01000764
[OBHZ] human gut metagenome; Vulva exsudate
831
915
+
Tyr
GTA
[ENA]
¢þ
>WENV180280529
OBHZ01001801
[OBHZ] human gut metagenome; Vulva exsudate
863
789
-
Gln
CTG
[ENA]
¢þ
>WENV180280509
OBHZ01000514
[OBHZ] human gut metagenome; Vulva exsudate
911
825
-
Leu
CAG
[ENA]
¢þ
>WENV180280503
OBHZ01000390
[OBHZ] human gut metagenome; Vulva exsudate
925
836
-
Ser
CGA
[ENA]
¢þ
>WENV180280504
OBHZ01000507
[OBHZ] human gut metagenome; Vulva exsudate
947
1022
+
Gly
GCC
[ENA]
¢þ
>WENV180280527
OBHZ01001597
[OBHZ] human gut metagenome; Vulva exsudate
954
879
-
Thr
GGT
[ENA]
¢þ
>WENV180280508
OBHZ01000514
[OBHZ] human gut metagenome; Vulva exsudate
1030
955
-
His
GTG
[ENA]
¢þ
>WENV180280526
OBHZ01001471
[OBHZ] human gut metagenome; Vulva exsudate
1049
973
-
Arg
TCT
[ENA]
¢þ
>WENV180280505
OBHZ01000507
[OBHZ] human gut metagenome; Vulva exsudate
1080
1153
+
Cys
GCA
[ENA]
¢þ
>WENV180280518
OBHZ01000764
[OBHZ] human gut metagenome; Vulva exsudate
1115
1189
+
Gly
TCC
[ENA]
¢þ
>WENV180280523
OBHZ01000843
[OBHZ] human gut metagenome; Vulva exsudate
1157
1081
-
Arg
ACG
[ENA]
¢þ
>WENV180280506
OBHZ01000507
[OBHZ] human gut metagenome; Vulva exsudate
1164
1249
+
Leu
TAA
[ENA]
¢þ
>WENV180280507
OBHZ01000514
[OBHZ] human gut metagenome; Vulva exsudate
1166
1090
-
Arg
CCG
[ENA]
¢þ
>WENV180280519
OBHZ01000764
[OBHZ] human gut metagenome; Vulva exsudate
1196
1271
+
Thr
GGT
[ENA]
¢þ
>WENV180280522
OBHZ01000843
[OBHZ] human gut metagenome; Vulva exsudate
1253
1161
-
Ser
GCT
[ENA]
¢þ
>WENV180280502
OBHZ01000280
[OBHZ] human gut metagenome; Vulva exsudate
1923
2010
+
Ser
TGA
[ENA]
¢þ
>WENV180280500
OBHZ01000209
[OBHZ] human gut metagenome; Vulva exsudate
2175
2086
-
Ser
GGA
[ENA]
¢þ
>WENV180280498
OBHZ01000035
[OBHZ] human gut metagenome; Vulva exsudate
2717
2642
-
Ala
TGC
[ENA]
¢þ
>WENV180280497
OBHZ01000035
[OBHZ] human gut metagenome; Vulva exsudate
2919
2843
-
Ile
GAT
[ENA]
¢þ
>WENV180280496
OBHZ01000023
[OBHZ] human gut metagenome; Vulva exsudate
3073
3149
+
Met
CAT
[ENA]
¢þ
>WENV180280489
OBHZ01000007
[OBHZ] human gut metagenome; Vulva exsudate
15386
15313
-
Ala
CGC
[ENA]
¢þ
>WENV180280475
OBHZ01000005
[OBHZ] human gut metagenome; Vulva exsudate
18225
18299
+
Pro
GGG
[ENA]
¢þ
>WENV180280495
OBHZ01000013
[OBHZ] human gut metagenome; Vulva exsudate
18433
18520
+
Ser
GCT
[ENA]
¢þ
>WENV180280488
OBHZ01000007
[OBHZ] human gut metagenome; Vulva exsudate
35663
35589
-
Arg
CCT
[ENA]
¢þ
>WENV180280490
OBHZ01000008
[OBHZ] human gut metagenome; Vulva exsudate
37599
37523
-
Pro
CGG
[ENA]
¢þ
>WENV180280471
OBHZ01000004
[OBHZ] human gut metagenome; Vulva exsudate
46811
46886
+
Leu
CAA
[ENA]
¢þ
>WENV180280469
OBHZ01000002
[OBHZ] human gut metagenome; Vulva exsudate
49779
49695
-
Leu
CAG
[ENA]
¢þ
>WENV180280491
OBHZ01000009
[OBHZ] human gut metagenome; Vulva exsudate
50186
50258
+
Gln
TTG
[ENA]
¢þ
>WENV180280468
OBHZ01000002
[OBHZ] human gut metagenome; Vulva exsudate
66098
66023
-
Ala
TGC
[ENA]
¢þ
>WENV180280467
OBHZ01000002
[OBHZ] human gut metagenome; Vulva exsudate
66357
66283
-
Ile
GAT
[ENA]
¢þ
>WENV180280494
OBHZ01000010
[OBHZ] human gut metagenome; Vulva exsudate
86726
86651
-
Val
TAC
[ENA]
¢þ
>WENV180280492
OBHZ01000009
[OBHZ] human gut metagenome; Vulva exsudate
95452
95528
+
Leu
TAA
[ENA]
¢þ
>WENV180280493
OBHZ01000010
[OBHZ] human gut metagenome; Vulva exsudate
100711
100636
-
Ile2
CAT
[ENA]
¢þ
>WENV180280472
OBHZ01000004
[OBHZ] human gut metagenome; Vulva exsudate
101521
101608
+
Leu
GAG
[ENA]
¢þ
>WENV180280486
OBHZ01000006
[OBHZ] human gut metagenome; Vulva exsudate
104602
104528
-
Ala
GGC
[ENA]
¢þ
>WENV180280487
OBHZ01000007
[OBHZ] human gut metagenome; Vulva exsudate
118712
118637
-
Thr
TGT
[ENA]
¢þ
>WENV180280470
OBHZ01000003
[OBHZ] human gut metagenome; Vulva exsudate
127687
127761
+
Arg
CCG
[ENA]
¢þ
>WENV180280485
OBHZ01000006
[OBHZ] human gut metagenome; Vulva exsudate
174136
174063
-
Glu
CTC
[ENA]
¢þ
>WENV180280484
OBHZ01000006
[OBHZ] human gut metagenome; Vulva exsudate
174308
174236
-
Gln
CTG
[ENA]
¢þ
>WENV180280474
OBHZ01000004
[OBHZ] human gut metagenome; Vulva exsudate
181514
181440
-
Arg
CCG
[ENA]
¢þ
>WENV180280473
OBHZ01000004
[OBHZ] human gut metagenome; Vulva exsudate
181630
181557
-
Arg
ACG
[ENA]
¢þ
>WENV180280482
OBHZ01000005
[OBHZ] human gut metagenome; Vulva exsudate
227129
227056
-
Val
CAC
[ENA]
¢þ
>WENV180280476
OBHZ01000005
[OBHZ] human gut metagenome; Vulva exsudate
229384
229457
+
Gly
GCC
[ENA]
¢þ
>WENV180280477
OBHZ01000005
[OBHZ] human gut metagenome; Vulva exsudate
229512
229583
+
Cys
GCA
[ENA]
¢þ
>WENV180280478
OBHZ01000005
[OBHZ] human gut metagenome; Vulva exsudate
229604
229676
+
Val
GAC
[ENA]
¢þ
>WENV180280479
OBHZ01000005
[OBHZ] human gut metagenome; Vulva exsudate
229835
229908
+
Gly
GCC
[ENA]
¢þ
>WENV180280480
OBHZ01000005
[OBHZ] human gut metagenome; Vulva exsudate
229963
230034
+
Cys
GCA
[ENA]
¢þ
>WENV180280481
OBHZ01000005
[OBHZ] human gut metagenome; Vulva exsudate
230055
230127
+
Val
GAC
[ENA]
¢þ
>WENV180280464
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
242585
242510
-
Pro
TGG
[ENA]
¢þ
>WENV180280445
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
242774
242846
+
Gly
TCC
[ENA]
¢þ
>WENV180280446
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
276792
276867
+
Arg
TCT
[ENA]
¢þ
>WENV180280447
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
307073
307148
+
His
GTG
[ENA]
¢þ
>WENV180280463
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
324453
324379
-
Lys
CTT
[ENA]
¢þ
>WENV180280462
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
324654
324579
-
Lys
CTT
[ENA]
¢þ
>WENV180280448
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
325785
325868
+
Leu
TAG
[ENA]
¢þ
>WENV180280461
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
542446
542372
-
fMet
CAT
[ENA]
¢þ
>WENV180280465
OBHZ01000002
[OBHZ] human gut metagenome; Vulva exsudate
665257
665346
+
Ser
CGA
[ENA]
¢þ
>WENV180280466
OBHZ01000002
[OBHZ] human gut metagenome; Vulva exsudate
721284
721198
-
Ser
GGA
[ENA]
¢þ
>WENV180280460
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
758276
758203
-
Trp
CCA
[ENA]
¢þ
>WENV180280459
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
780135
780059
-
Met
CAT
[ENA]
¢þ
>WENV180280458
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
780269
780196
-
Thr
GGT
[ENA]
¢þ
>WENV180280457
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
780517
780434
-
Tyr
GTA
[ENA]
¢þ
>WENV180280456
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
1047656
1047581
-
Thr
CGT
[ENA]
¢þ
>WENV180280449
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
1130890
1130963
+
Lys
TTT
[ENA]
¢þ
>WENV180280450
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
1159468
1159541
+
Glu
TTC
[ENA]
¢þ
>WENV180280451
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
1159704
1159778
+
Asp
GTC
[ENA]
¢þ
>WENV180280452
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
1327678
1327749
+
Gly
CCC
[ENA]
¢þ
>WENV180280455
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
1352543
1352470
-
Arg
ACG
[ENA]
¢þ
>WENV180280454
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
1355178
1355089
-
Ser
GCT
[ENA]
¢þ
>WENV180280453
OBHZ01000001
[OBHZ] human gut metagenome; Vulva exsudate
1358550
1358463
-
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK