Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA gene List

[OCGU] soil metagenome; soil

HIT: 59 sequence(s).

Download Sequence
View ClustalW result

The reliable tRNA genes	All candidate tRNA genes

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
	>WENV180510661	OCGU01000077	[OCGU] soil metagenome; soil		8	95	+	Ser	GGA	[ENA]	◯
	>WENV180510650	OCGU01000024	[OCGU] soil metagenome; soil		43	129	+	Leu	CAG	[ENA]	◯
	>WENV180510683	OCGU01000329	[OCGU] soil metagenome; soil		62	137	+	Thr	GGT	[ENA]	◯
	>WENV180510634	OCGU01000012	[OCGU] soil metagenome; soil		63	138	+	Trp	CCA	[ENA]	◯
	>WENV180510684	OCGU01000355	[OCGU] soil metagenome; soil		78	2	-	Asp	GTC	[ENA]	◯
	>WENV180510657	OCGU01000037	[OCGU] soil metagenome; soil		87	1	-	Leu	CAG	[ENA]	◯
	>WENV180510662	OCGU01000087	[OCGU] soil metagenome; soil		92	166	+	Sup	CTA	[ENA]	◯
	>WENV180510682	OCGU01000245	[OCGU] soil metagenome; soil		108	33	-	Glu	TTC	[ENA]	◯
	>WENV180510679	OCGU01000198	[OCGU] soil metagenome; soil		127	202	+	Glu	TTC	[ENA]	◯
	>WENV180510678	OCGU01000102	[OCGU] soil metagenome; soil		144	70	-	Gln	TTG	[ENA]	◯
	>WENV180510651	OCGU01000024	[OCGU] soil metagenome; soil		164	250	+	Leu	CAG	[ENA]	◯
	>WENV180510649	OCGU01000023	[OCGU] soil metagenome; soil		167	92	-	Gly	GCC	[ENA]	◯
	>WENV180510681	OCGU01000228	[OCGU] soil metagenome; soil		186	111	-	Ala	TGC	[ENA]	◯
	>WENV180510677	OCGU01000102	[OCGU] soil metagenome; soil		253	179	-	Gln	TTG	[ENA]	◯
	>WENV180510669	OCGU01000091	[OCGU] soil metagenome; soil		268	193	-	Lys	TTT	[ENA]	◯
	>WENV180510680	OCGU01000228	[OCGU] soil metagenome; soil		305	229	-	Ile	GAT	[ENA]	◯
	>WENV180510676	OCGU01000102	[OCGU] soil metagenome; soil		361	277	-	Leu	TAG	[ENA]	◯
	>WENV180510674	OCGU01000094	[OCGU] soil metagenome; soil		381	306	-	Thr	GGT	[ENA]	◯
	>WENV180510675	OCGU01000102	[OCGU] soil metagenome; soil		447	371	-	Met	CAT	[ENA]	◯
	>WENV180510673	OCGU01000094	[OCGU] soil metagenome; soil		461	387	-	Gly	TCC	[ENA]	◯
	>WENV180510668	OCGU01000091	[OCGU] soil metagenome; soil		476	401	-	Lys	TTT	[ENA]	◯
	>WENV180510672	OCGU01000094	[OCGU] soil metagenome; soil		662	578	-	Tyr	GTA	[ENA]	◯
	>WENV180510667	OCGU01000091	[OCGU] soil metagenome; soil		698	623	-	Lys	TTT	[ENA]	◯
	>WENV180510671	OCGU01000094	[OCGU] soil metagenome; soil		746	671	-	Thr	TGT	[ENA]	◯
	>WENV180510666	OCGU01000091	[OCGU] soil metagenome; soil		778	703	-	Val	TAC	[ENA]	◯
	>WENV180510665	OCGU01000091	[OCGU] soil metagenome; soil		900	825	-	Val	TAC	[ENA]	◯
	>WENV180510663	OCGU01000090	[OCGU] soil metagenome; soil		2384	2459	+	Asn	GTT	[ENA]	◯
	>WENV180510670	OCGU01000093	[OCGU] soil metagenome; soil		3292	3367	+	Thr	CGT	[ENA]	◯
	>WENV180510664	OCGU01000091	[OCGU] soil metagenome; soil		3600	3675	+	Ala	GGC	[ENA]	◯
	>WENV180510646	OCGU01000017	[OCGU] soil metagenome; soil		11639	11553	-	Leu	TAA	[ENA]	◯
	>WENV180510645	OCGU01000017	[OCGU] soil metagenome; soil		11725	11652	-	Cys	GCA	[ENA]	◯
	>WENV180510644	OCGU01000017	[OCGU] soil metagenome; soil		11855	11780	-	Gly	GCC	[ENA]	◯
	>WENV180510655	OCGU01000034	[OCGU] soil metagenome; soil		11995	12071	+	Pro	CGG	[ENA]	◯
	>WENV180510648	OCGU01000023	[OCGU] soil metagenome; soil		29901	29976	+	Phe	GAA	[ENA]	◯
	>WENV180510635	OCGU01000012	[OCGU] soil metagenome; soil		35481	35557	+	Arg	CCG	[ENA]	◯
	>WENV180510636	OCGU01000012	[OCGU] soil metagenome; soil		35616	35691	+	His	GTG	[ENA]	◯
	>WENV180510637	OCGU01000012	[OCGU] soil metagenome; soil		35712	35798	+	Leu	CAG	[ENA]	◯
	>WENV180510638	OCGU01000012	[OCGU] soil metagenome; soil		35841	35917	+	Pro	TGG	[ENA]	◯
	>WENV180510653	OCGU01000028	[OCGU] soil metagenome; soil		40373	40448	+	Phe	GAA	[ENA]	◯
	>WENV180510660	OCGU01000043	[OCGU] soil metagenome; soil		41913	41988	+	Lys	TTT	[ENA]	◯
	>WENV180510626	OCGU01000001	[OCGU] soil metagenome; soil		41933	42009	+	Val	GAC	[ENA]	◯
	>WENV180510627	OCGU01000001	[OCGU] soil metagenome; soil		42014	42090	+	Val	GAC	[ENA]	◯
	>WENV180510659	OCGU01000040	[OCGU] soil metagenome; soil		43438	43524	+	Leu	GAG	[ENA]	◯
	>WENV180510656	OCGU01000036	[OCGU] soil metagenome; soil		48384	48460	+	Pro	GGG	[ENA]	◯
	>WENV180510658	OCGU01000038	[OCGU] soil metagenome; soil		48796	48720	-	fMet	CAT	[ENA]	◯
	>WENV180510639	OCGU01000015	[OCGU] soil metagenome; soil		54452	54377	-	Ile2	CAT	[ENA]	◯
	>WENV180510654	OCGU01000029	[OCGU] soil metagenome; soil		55943	56019	+	Arg	TCT	[ENA]	◯
	>WENV180510652	OCGU01000025	[OCGU] soil metagenome; soil		61832	61916	+	Leu	CAA	[ENA]	◯
	>WENV180510643	OCGU01000017	[OCGU] soil metagenome; soil		63295	63206	-	Ser	CGA	[ENA]	◯
	>WENV180510641	OCGU01000017	[OCGU] soil metagenome; soil		64287	64362	+	Asn	GTT	[ENA]	◯
	>WENV180510647	OCGU01000019	[OCGU] soil metagenome; soil		70987	71060	+	Gly	CCC	[ENA]	◯
	>WENV180510640	OCGU01000016	[OCGU] soil metagenome; soil		72307	72213	-	SeC	TCA	[ENA]	◯
	>WENV180510642	OCGU01000017	[OCGU] soil metagenome; soil		77840	77765	-	Asn	GTT	[ENA]	◯
	>WENV180510632	OCGU01000006	[OCGU] soil metagenome; soil		105789	105702	-	Ser	TGA	[ENA]	◯
	>WENV180510633	OCGU01000011	[OCGU] soil metagenome; soil		107278	107362	+	Tyr	GTA	[ENA]	◯
	>WENV180510629	OCGU01000005	[OCGU] soil metagenome; soil		128734	128826	+	Ser	GCT	[ENA]	◯
	>WENV180510630	OCGU01000005	[OCGU] soil metagenome; soil		128830	128906	+	Arg	ACG	[ENA]	◯
	>WENV180510631	OCGU01000005	[OCGU] soil metagenome; soil		129105	129181	+	Arg	ACG	[ENA]	◯
	>WENV180510628	OCGU01000002	[OCGU] soil metagenome; soil		175824	175898	+	Arg	CCT	[ENA]	◯
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence
View ClustalW result

BACK