This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180554119
OCJM01001605
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
12
85
+
Cys
GCA
[ENA]
¢þ
>WENV180554151
OCJM01010753
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
43
115
+
Phe
GAA
[ENA]
¢þ
>WENV180554136
OCJM01004710
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
52
128
+
Pro
TGG
[ENA]
¢þ
>WENV180554141
OCJM01006077
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
54
127
+
Arg
CCG
[ENA]
¢þ
>WENV180554148
OCJM01009613
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
56
131
+
Trp
CCA
[ENA]
¢þ
>WENV180554121
OCJM01001874
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
59
131
+
Val
TAC
[ENA]
¢þ
>WENV180554146
OCJM01009070
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
61
144
+
Leu
CAA
[ENA]
¢þ
>WENV180554126
OCJM01002191
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
64
153
+
Ser
GCT
[ENA]
¢þ
>WENV180554138
OCJM01005340
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
67
137
+
Trp
CCA
[ENA]
¢þ
>WENV180554142
OCJM01006381
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
68
142
+
Met
CAT
[ENA]
¢þ
>WENV180554082
OCJM01000039
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
79
155
+
Ile
GAT
[ENA]
¢þ
>WENV180554140
OCJM01005689
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
83
9
-
Lys
CTT
[ENA]
¢þ
>WENV180554120
OCJM01001605
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
98
184
+
Leu
TAA
[ENA]
¢þ
>WENV180554144
OCJM01008207
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
115
44
-
Gly
GCC
[ENA]
¢þ
>WENV180554153
OCJM01011515
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
115
191
+
Pro
CGG
[ENA]
¢þ
>WENV180554152
OCJM01010753
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
120
202
+
Tyr
GTA
[ENA]
¢þ
>WENV180554154
OCJM01012873
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
125
52
-
Asn
GTT
[ENA]
¢þ
>WENV180554105
OCJM01000079
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
127
54
-
Gly
TCC
[ENA]
¢þ
>WENV180554122
OCJM01001874
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
134
206
+
Asp
GTC
[ENA]
¢þ
>WENV180554132
OCJM01002866
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
135
58
-
Phe
GAA
[ENA]
¢þ
>WENV180554147
OCJM01009388
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
145
59
-
Leu
CAG
[ENA]
¢þ
>WENV180554109
OCJM01000161
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
146
70
-
Asp
GTC
[ENA]
¢þ
>WENV180554149
OCJM01009740
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
151
76
-
Gly
GCC
[ENA]
¢þ
>WENV180554139
OCJM01005340
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
151
225
+
His
GTG
[ENA]
¢þ
>WENV180554137
OCJM01005254
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
161
86
-
Phe
GAA
[ENA]
¢þ
>WENV180554083
OCJM01000039
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
163
236
+
Glu
TTC
[ENA]
¢þ
>WENV180554087
OCJM01000049
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
164
235
+
Arg
CCG
[ENA]
¢þ
>WENV180554127
OCJM01002191
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
167
240
+
Glu
TTC
[ENA]
¢þ
>WENV180554135
OCJM01003779
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
168
257
+
Ser
CGA
[ENA]
¢þ
>WENV180554143
OCJM01008207
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
195
120
-
Thr
TGT
[ENA]
¢þ
>WENV180554112
OCJM01000313
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
208
133
-
Thr
TGT
[ENA]
¢þ
>WENV180554134
OCJM01003570
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
208
295
+
Ser
GGA
[ENA]
¢þ
>WENV180554123
OCJM01001874
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
209
281
+
Lys
TTT
[ENA]
¢þ
>WENV180554150
OCJM01010694
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
212
136
-
fMet
CAT
[ENA]
¢þ
>WENV180554131
OCJM01002866
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
214
139
-
Asp
GTC
[ENA]
¢þ
>WENV180554104
OCJM01000079
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
216
131
-
Leu
TAA
[ENA]
¢þ
>WENV180554080
OCJM01000034
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
227
157
-
Cys
GCA
[ENA]
¢þ
>WENV180554145
OCJM01008211
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
244
156
-
Ser
GCT
[ENA]
¢þ
>WENV180554128
OCJM01002191
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
266
340
+
Val
TAC
[ENA]
¢þ
>WENV180554116
OCJM01001202
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
275
347
+
Thr
GGT
[ENA]
¢þ
>WENV180554111
OCJM01000313
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
285
210
-
Val
TAC
[ENA]
¢þ
>WENV180554117
OCJM01001323
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
285
360
+
Asn
GTT
[ENA]
¢þ
>WENV180554124
OCJM01001874
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
290
373
+
Leu
TAG
[ENA]
¢þ
>WENV180554118
OCJM01001367
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
310
232
-
His
GTG
[ENA]
¢þ
>WENV180554130
OCJM01002866
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
336
261
-
fMet
CAT
[ENA]
¢þ
>WENV180554129
OCJM01002191
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
350
425
+
Asp
GTC
[ENA]
¢þ
>WENV180554103
OCJM01000079
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
351
277
-
Lys
TTT
[ENA]
¢þ
>WENV180554133
OCJM01002934
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
373
300
-
Arg
CCT
[ENA]
¢þ
>WENV180554125
OCJM01001874
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
382
456
+
Thr
TGT
[ENA]
¢þ
>WENV180554110
OCJM01000313
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
484
410
-
Asn
GTT
[ENA]
¢þ
>WENV180554102
OCJM01000079
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
493
419
-
Gln
TTG
[ENA]
¢þ
>WENV180554101
OCJM01000079
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
582
499
-
Tyr
GTA
[ENA]
¢þ
>WENV180554115
OCJM01000766
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
681
596
-
Leu
CAA
[ENA]
¢þ
>WENV180554113
OCJM01000492
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
711
637
-
Sup
TCA
[ENA]
¢þ
>WENV180554114
OCJM01000611
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
757
676
-
Leu
CAA
[ENA]
¢þ
>WENV180554107
OCJM01000119
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
881
957
+
Arg
TCT
[ENA]
¢þ
>WENV180554108
OCJM01000119
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
1037
1113
+
Arg
TCG
[ENA]
¢þ
>WENV180554075
OCJM01000005
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
1483
1409
-
Gln
TTG
[ENA]
¢þ
>WENV180554074
OCJM01000005
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
1568
1488
-
Tyr
GTA
[ENA]
¢þ
>WENV180554100
OCJM01000068
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
1722
1796
+
Ala
TGC
[ENA]
¢þ
>WENV180554106
OCJM01000103
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
1951
1878
-
Gly
GCC
[ENA]
¢þ
>WENV180554099
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
4875
4786
-
Ser
GCT
[ENA]
¢þ
>WENV180554098
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
4962
4887
-
Ile
GAT
[ENA]
¢þ
>WENV180554097
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5067
4995
-
Gly
TCC
[ENA]
¢þ
>WENV180554096
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5158
5086
-
Phe
GAA
[ENA]
¢þ
>WENV180554095
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5235
5160
-
fMet
CAT
[ENA]
¢þ
>WENV180554094
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5334
5245
-
Ser
TGA
[ENA]
¢þ
>WENV180554093
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5424
5349
-
Ile2
CAT
[ENA]
¢þ
>WENV180554092
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5517
5442
-
Met
CAT
[ENA]
¢þ
>WENV180554091
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5606
5531
-
Pro
TGG
[ENA]
¢þ
>WENV180554090
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5686
5613
-
Arg
ACG
[ENA]
¢þ
>WENV180554089
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5782
5698
-
Leu
TAA
[ENA]
¢þ
>WENV180554088
OCJM01000063
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
5862
5791
-
Gly
GCC
[ENA]
¢þ
>WENV180554086
OCJM01000044
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
7568
7495
-
Asn
GTT
[ENA]
¢þ
>WENV180554085
OCJM01000044
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
7670
7597
-
Glu
TTC
[ENA]
¢þ
>WENV180554084
OCJM01000044
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
7860
7935
+
Arg
TCT
[ENA]
¢þ
>WENV180554081
OCJM01000035
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
9861
9937
+
Arg
TCT
[ENA]
¢þ
>WENV180554079
OCJM01000030
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
10070
10155
+
Leu
AAG
[ENA]
¢þ
>WENV180554073
OCJM01000003
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
12807
12733
-
Glu
TTC
[ENA]
¢þ
>WENV180554072
OCJM01000003
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
12887
12814
-
Gln
TTG
[ENA]
¢þ
>WENV180554078
OCJM01000026
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
15523
15436
-
Ser
GGA
[ENA]
¢þ
>WENV180554077
OCJM01000025
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
22368
22438
+
Thr
GGT
[ENA]
¢þ
>WENV180554076
OCJM01000008
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
55058
54987
-
Arg
CCT
[ENA]
¢þ
>WENV180554071
OCJM01000001
[OCJM] human gut metagenome; Infant 2 DOL 6 gut
92913
92985
+
Lys
CTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK