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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[ODDS] human metagenome; G_DNA_Posterior fornix
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180700517
ODDS01006125
[ODDS] human metagenome; G_DNA_Posterior fornix
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180700527
ODDS01009834
[ODDS] human metagenome; G_DNA_Posterior fornix
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180700509
ODDS01002415
[ODDS] human metagenome; G_DNA_Posterior fornix
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180700519
ODDS01006723
[ODDS] human metagenome; G_DNA_Posterior fornix
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180700494
ODDS01001199
[ODDS] human metagenome; G_DNA_Posterior fornix
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180700504
ODDS01001582
[ODDS] human metagenome; G_DNA_Posterior fornix
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180700524
ODDS01008646
[ODDS] human metagenome; G_DNA_Posterior fornix
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180700526
ODDS01009597
[ODDS] human metagenome; G_DNA_Posterior fornix
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180700512
ODDS01002634
[ODDS] human metagenome; G_DNA_Posterior fornix
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180700523
ODDS01008183
[ODDS] human metagenome; G_DNA_Posterior fornix
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180700528
ODDS01009834
[ODDS] human metagenome; G_DNA_Posterior fornix
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180700490
ODDS01000726
[ODDS] human metagenome; G_DNA_Posterior fornix
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180700520
ODDS01006723
[ODDS] human metagenome; G_DNA_Posterior fornix
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180700499
ODDS01001346
[ODDS] human metagenome; G_DNA_Posterior fornix
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180700467
ODDS01000023
[ODDS] human metagenome; G_DNA_Posterior fornix
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180700521
ODDS01007775
[ODDS] human metagenome; G_DNA_Posterior fornix
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180700525
ODDS01008728
[ODDS] human metagenome; G_DNA_Posterior fornix
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180700506
ODDS01001721
[ODDS] human metagenome; G_DNA_Posterior fornix
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180700511
ODDS01002602
[ODDS] human metagenome; G_DNA_Posterior fornix
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180700518
ODDS01006503
[ODDS] human metagenome; G_DNA_Posterior fornix
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180700482
ODDS01000429
[ODDS] human metagenome; G_DNA_Posterior fornix
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180700522
ODDS01008183
[ODDS] human metagenome; G_DNA_Posterior fornix
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180700492
ODDS01001032
[ODDS] human metagenome; G_DNA_Posterior fornix
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180700516
ODDS01003947
[ODDS] human metagenome; G_DNA_Posterior fornix
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180700498
ODDS01001346
[ODDS] human metagenome; G_DNA_Posterior fornix
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180700514
ODDS01003389
[ODDS] human metagenome; G_DNA_Posterior fornix
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180700515
ODDS01003907
[ODDS] human metagenome; G_DNA_Posterior fornix
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180700501
ODDS01001403
[ODDS] human metagenome; G_DNA_Posterior fornix
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180700502
ODDS01001408
[ODDS] human metagenome; G_DNA_Posterior fornix
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180700489
ODDS01000726
[ODDS] human metagenome; G_DNA_Posterior fornix
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180700510
ODDS01002487
[ODDS] human metagenome; G_DNA_Posterior fornix
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180700513
ODDS01002917
[ODDS] human metagenome; G_DNA_Posterior fornix
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180700488
ODDS01000693
[ODDS] human metagenome; G_DNA_Posterior fornix
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180700508
ODDS01001853
[ODDS] human metagenome; G_DNA_Posterior fornix
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180700495
ODDS01001199
[ODDS] human metagenome; G_DNA_Posterior fornix
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180700497
ODDS01001268
[ODDS] human metagenome; G_DNA_Posterior fornix
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180700472
ODDS01000061
[ODDS] human metagenome; G_DNA_Posterior fornix
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180700477
ODDS01000316
[ODDS] human metagenome; G_DNA_Posterior fornix
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180700507
ODDS01001853
[ODDS] human metagenome; G_DNA_Posterior fornix
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180700500
ODDS01001403
[ODDS] human metagenome; G_DNA_Posterior fornix
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180700491
ODDS01001011
[ODDS] human metagenome; G_DNA_Posterior fornix
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180700493
ODDS01001097
[ODDS] human metagenome; G_DNA_Posterior fornix
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180700505
ODDS01001663
[ODDS] human metagenome; G_DNA_Posterior fornix
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180700496
ODDS01001199
[ODDS] human metagenome; G_DNA_Posterior fornix
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180700478
ODDS01000316
[ODDS] human metagenome; G_DNA_Posterior fornix
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180700480
ODDS01000353
[ODDS] human metagenome; G_DNA_Posterior fornix
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180700503
ODDS01001520
[ODDS] human metagenome; G_DNA_Posterior fornix
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180700470
ODDS01000059
[ODDS] human metagenome; G_DNA_Posterior fornix
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180700487
ODDS01000587
[ODDS] human metagenome; G_DNA_Posterior fornix
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180700485
ODDS01000538
[ODDS] human metagenome; G_DNA_Posterior fornix
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180700484
ODDS01000494
[ODDS] human metagenome; G_DNA_Posterior fornix
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180700486
ODDS01000553
[ODDS] human metagenome; G_DNA_Posterior fornix
815
890
+
His
GTG
[ENA]
¢þ
>WENV180700475
ODDS01000151
[ODDS] human metagenome; G_DNA_Posterior fornix
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180700483
ODDS01000482
[ODDS] human metagenome; G_DNA_Posterior fornix
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180700481
ODDS01000353
[ODDS] human metagenome; G_DNA_Posterior fornix
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180700479
ODDS01000318
[ODDS] human metagenome; G_DNA_Posterior fornix
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180700476
ODDS01000219
[ODDS] human metagenome; G_DNA_Posterior fornix
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180700471
ODDS01000061
[ODDS] human metagenome; G_DNA_Posterior fornix
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180700468
ODDS01000038
[ODDS] human metagenome; G_DNA_Posterior fornix
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180700474
ODDS01000143
[ODDS] human metagenome; G_DNA_Posterior fornix
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180700473
ODDS01000063
[ODDS] human metagenome; G_DNA_Posterior fornix
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180700469
ODDS01000038
[ODDS] human metagenome; G_DNA_Posterior fornix
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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