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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[ODEN] human metagenome; G_DNA_Posterior fornix
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180706348
ODEN01006125
[ODEN] human metagenome; G_DNA_Posterior fornix
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180706358
ODEN01009834
[ODEN] human metagenome; G_DNA_Posterior fornix
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180706340
ODEN01002415
[ODEN] human metagenome; G_DNA_Posterior fornix
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180706350
ODEN01006723
[ODEN] human metagenome; G_DNA_Posterior fornix
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180706325
ODEN01001199
[ODEN] human metagenome; G_DNA_Posterior fornix
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180706335
ODEN01001582
[ODEN] human metagenome; G_DNA_Posterior fornix
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180706355
ODEN01008646
[ODEN] human metagenome; G_DNA_Posterior fornix
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180706357
ODEN01009597
[ODEN] human metagenome; G_DNA_Posterior fornix
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180706343
ODEN01002634
[ODEN] human metagenome; G_DNA_Posterior fornix
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180706354
ODEN01008183
[ODEN] human metagenome; G_DNA_Posterior fornix
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180706359
ODEN01009834
[ODEN] human metagenome; G_DNA_Posterior fornix
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180706321
ODEN01000726
[ODEN] human metagenome; G_DNA_Posterior fornix
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180706351
ODEN01006723
[ODEN] human metagenome; G_DNA_Posterior fornix
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180706330
ODEN01001346
[ODEN] human metagenome; G_DNA_Posterior fornix
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180706298
ODEN01000023
[ODEN] human metagenome; G_DNA_Posterior fornix
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180706352
ODEN01007775
[ODEN] human metagenome; G_DNA_Posterior fornix
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180706356
ODEN01008728
[ODEN] human metagenome; G_DNA_Posterior fornix
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180706337
ODEN01001721
[ODEN] human metagenome; G_DNA_Posterior fornix
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180706342
ODEN01002602
[ODEN] human metagenome; G_DNA_Posterior fornix
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180706349
ODEN01006503
[ODEN] human metagenome; G_DNA_Posterior fornix
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180706313
ODEN01000429
[ODEN] human metagenome; G_DNA_Posterior fornix
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180706353
ODEN01008183
[ODEN] human metagenome; G_DNA_Posterior fornix
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180706323
ODEN01001032
[ODEN] human metagenome; G_DNA_Posterior fornix
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180706347
ODEN01003947
[ODEN] human metagenome; G_DNA_Posterior fornix
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180706329
ODEN01001346
[ODEN] human metagenome; G_DNA_Posterior fornix
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180706345
ODEN01003389
[ODEN] human metagenome; G_DNA_Posterior fornix
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180706346
ODEN01003907
[ODEN] human metagenome; G_DNA_Posterior fornix
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180706332
ODEN01001403
[ODEN] human metagenome; G_DNA_Posterior fornix
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180706333
ODEN01001408
[ODEN] human metagenome; G_DNA_Posterior fornix
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180706320
ODEN01000726
[ODEN] human metagenome; G_DNA_Posterior fornix
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180706341
ODEN01002487
[ODEN] human metagenome; G_DNA_Posterior fornix
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180706344
ODEN01002917
[ODEN] human metagenome; G_DNA_Posterior fornix
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180706319
ODEN01000693
[ODEN] human metagenome; G_DNA_Posterior fornix
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180706339
ODEN01001853
[ODEN] human metagenome; G_DNA_Posterior fornix
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180706326
ODEN01001199
[ODEN] human metagenome; G_DNA_Posterior fornix
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180706328
ODEN01001268
[ODEN] human metagenome; G_DNA_Posterior fornix
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180706303
ODEN01000061
[ODEN] human metagenome; G_DNA_Posterior fornix
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180706308
ODEN01000316
[ODEN] human metagenome; G_DNA_Posterior fornix
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180706338
ODEN01001853
[ODEN] human metagenome; G_DNA_Posterior fornix
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180706331
ODEN01001403
[ODEN] human metagenome; G_DNA_Posterior fornix
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180706322
ODEN01001011
[ODEN] human metagenome; G_DNA_Posterior fornix
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180706324
ODEN01001097
[ODEN] human metagenome; G_DNA_Posterior fornix
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180706336
ODEN01001663
[ODEN] human metagenome; G_DNA_Posterior fornix
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180706327
ODEN01001199
[ODEN] human metagenome; G_DNA_Posterior fornix
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180706309
ODEN01000316
[ODEN] human metagenome; G_DNA_Posterior fornix
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180706311
ODEN01000353
[ODEN] human metagenome; G_DNA_Posterior fornix
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180706334
ODEN01001520
[ODEN] human metagenome; G_DNA_Posterior fornix
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180706301
ODEN01000059
[ODEN] human metagenome; G_DNA_Posterior fornix
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180706318
ODEN01000587
[ODEN] human metagenome; G_DNA_Posterior fornix
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180706316
ODEN01000538
[ODEN] human metagenome; G_DNA_Posterior fornix
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180706315
ODEN01000494
[ODEN] human metagenome; G_DNA_Posterior fornix
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180706317
ODEN01000553
[ODEN] human metagenome; G_DNA_Posterior fornix
815
890
+
His
GTG
[ENA]
¢þ
>WENV180706306
ODEN01000151
[ODEN] human metagenome; G_DNA_Posterior fornix
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180706314
ODEN01000482
[ODEN] human metagenome; G_DNA_Posterior fornix
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180706312
ODEN01000353
[ODEN] human metagenome; G_DNA_Posterior fornix
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180706310
ODEN01000318
[ODEN] human metagenome; G_DNA_Posterior fornix
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180706307
ODEN01000219
[ODEN] human metagenome; G_DNA_Posterior fornix
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180706302
ODEN01000061
[ODEN] human metagenome; G_DNA_Posterior fornix
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180706299
ODEN01000038
[ODEN] human metagenome; G_DNA_Posterior fornix
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180706305
ODEN01000143
[ODEN] human metagenome; G_DNA_Posterior fornix
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180706304
ODEN01000063
[ODEN] human metagenome; G_DNA_Posterior fornix
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180706300
ODEN01000038
[ODEN] human metagenome; G_DNA_Posterior fornix
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK