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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[ODGT] human metagenome; G_DNA_Anterior nares
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180726334
ODGT01003103
[ODGT] human metagenome; G_DNA_Anterior nares
12
86
+
Gly
GCC
[ENA]
¢þ
>WENV180726339
ODGT01006378
[ODGT] human metagenome; G_DNA_Anterior nares
74
150
+
Met
CAT
[ENA]
¢þ
>WENV180726329
ODGT01001762
[ODGT] human metagenome; G_DNA_Anterior nares
78
151
+
Gly
TCC
[ENA]
¢þ
>WENV180726328
ODGT01001611
[ODGT] human metagenome; G_DNA_Anterior nares
85
8
-
Pro
TGG
[ENA]
¢þ
>WENV180726335
ODGT01003103
[ODGT] human metagenome; G_DNA_Anterior nares
97
185
+
Leu
TAA
[ENA]
¢þ
>WENV180726325
ODGT01000957
[ODGT] human metagenome; G_DNA_Anterior nares
105
33
-
Arg
CCG
[ENA]
¢þ
>WENV180726336
ODGT01003356
[ODGT] human metagenome; G_DNA_Anterior nares
106
181
+
Arg
CCG
[ENA]
¢þ
>WENV180726327
ODGT01001275
[ODGT] human metagenome; G_DNA_Anterior nares
112
27
-
Ser
GGA
[ENA]
¢þ
>WENV180726333
ODGT01002480
[ODGT] human metagenome; G_DNA_Anterior nares
148
56
-
Ser
TGA
[ENA]
¢þ
>WENV180726338
ODGT01004675
[ODGT] human metagenome; G_DNA_Anterior nares
151
225
+
Leu
TAA
[ENA]
¢þ
>WENV180726330
ODGT01001762
[ODGT] human metagenome; G_DNA_Anterior nares
169
243
+
Asn
GTT
[ENA]
¢þ
>WENV180726337
ODGT01004580
[ODGT] human metagenome; G_DNA_Anterior nares
181
102
-
Gln
TTG
[ENA]
¢þ
>WENV180726332
ODGT01002480
[ODGT] human metagenome; G_DNA_Anterior nares
231
158
-
Ile2
CAT
[ENA]
¢þ
>WENV180726324
ODGT01000758
[ODGT] human metagenome; G_DNA_Anterior nares
241
333
+
Ser
GCT
[ENA]
¢þ
>WENV180726331
ODGT01001762
[ODGT] human metagenome; G_DNA_Anterior nares
245
319
+
Glu
TTC
[ENA]
¢þ
>WENV180726326
ODGT01001094
[ODGT] human metagenome; G_DNA_Anterior nares
343
270
-
Gly
CCC
[ENA]
¢þ
>WENV180726323
ODGT01000001
[ODGT] human metagenome; G_DNA_Anterior nares
2345
2269
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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