This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ODHO] human metagenome; G_DNA_Posterior fornix
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180748681
ODHO01002256
[ODHO] human metagenome; G_DNA_Posterior fornix
3
77
+
Gly
GCC
[ENA]
¢þ
>WENV180748665
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
60
134
+
Val
TAC
[ENA]
¢þ
>WENV180748645
ODHO01000073
[ODHO] human metagenome; G_DNA_Posterior fornix
60
143
+
Tyr
GTA
[ENA]
¢þ
>WENV180748654
ODHO01000092
[ODHO] human metagenome; G_DNA_Posterior fornix
66
140
+
Asn
GTT
[ENA]
¢þ
>WENV180748662
ODHO01000113
[ODHO] human metagenome; G_DNA_Posterior fornix
76
1
-
Asp
GTC
[ENA]
¢þ
>WENV180748680
ODHO01000946
[ODHO] human metagenome; G_DNA_Posterior fornix
137
64
-
Trp
CCA
[ENA]
¢þ
>WENV180748666
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
138
210
+
Lys
TTT
[ENA]
¢þ
>WENV180748646
ODHO01000073
[ODHO] human metagenome; G_DNA_Posterior fornix
146
218
+
Trp
CCA
[ENA]
¢þ
>WENV180748679
ODHO01000680
[ODHO] human metagenome; G_DNA_Posterior fornix
148
74
-
Ala
TGC
[ENA]
¢þ
>WENV180748637
ODHO01000016
[ODHO] human metagenome; G_DNA_Posterior fornix
149
225
+
Ile
GAT
[ENA]
¢þ
>WENV180748655
ODHO01000092
[ODHO] human metagenome; G_DNA_Posterior fornix
149
241
+
Ser
GGA
[ENA]
¢þ
>WENV180748661
ODHO01000113
[ODHO] human metagenome; G_DNA_Posterior fornix
153
78
-
fMet
CAT
[ENA]
¢þ
>WENV180748667
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
223
306
+
Leu
TAG
[ENA]
¢þ
>WENV180748638
ODHO01000016
[ODHO] human metagenome; G_DNA_Posterior fornix
226
317
+
Ser
GCT
[ENA]
¢þ
>WENV180748647
ODHO01000073
[ODHO] human metagenome; G_DNA_Posterior fornix
230
303
+
His
GTG
[ENA]
¢þ
>WENV180748660
ODHO01000113
[ODHO] human metagenome; G_DNA_Posterior fornix
250
164
-
Ser
TGA
[ENA]
¢þ
>WENV180748648
ODHO01000073
[ODHO] human metagenome; G_DNA_Posterior fornix
309
382
+
Gln
TTG
[ENA]
¢þ
>WENV180748668
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
329
403
+
Thr
TGT
[ENA]
¢þ
>WENV180748659
ODHO01000113
[ODHO] human metagenome; G_DNA_Posterior fornix
355
282
-
Glu
TTC
[ENA]
¢þ
>WENV180748649
ODHO01000073
[ODHO] human metagenome; G_DNA_Posterior fornix
405
475
+
Cys
GCA
[ENA]
¢þ
>WENV180748669
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
413
484
+
Gly
GCC
[ENA]
¢þ
>WENV180748670
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
496
581
+
Leu
TAA
[ENA]
¢þ
>WENV180748650
ODHO01000073
[ODHO] human metagenome; G_DNA_Posterior fornix
516
602
+
Leu
CAA
[ENA]
¢þ
>WENV180748664
ODHO01000141
[ODHO] human metagenome; G_DNA_Posterior fornix
520
594
+
Lys
CTT
[ENA]
¢þ
>WENV180748678
ODHO01000262
[ODHO] human metagenome; G_DNA_Posterior fornix
521
447
-
Asn
GTT
[ENA]
¢þ
>WENV180748671
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
590
664
+
Arg
ACG
[ENA]
¢þ
>WENV180748672
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
672
745
+
Pro
TGG
[ENA]
¢þ
>WENV180748673
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
775
850
+
Met
CAT
[ENA]
¢þ
>WENV180748674
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
862
937
+
Ile2
CAT
[ENA]
¢þ
>WENV180748675
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
959
1034
+
fMet
CAT
[ENA]
¢þ
>WENV180748676
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
1036
1111
+
Asp
GTC
[ENA]
¢þ
>WENV180748677
ODHO01000186
[ODHO] human metagenome; G_DNA_Posterior fornix
1116
1190
+
Phe
GAA
[ENA]
¢þ
>WENV180748656
ODHO01000092
[ODHO] human metagenome; G_DNA_Posterior fornix
1368
1440
+
Glu
TTC
[ENA]
¢þ
>WENV180748657
ODHO01000092
[ODHO] human metagenome; G_DNA_Posterior fornix
1444
1518
+
Val
TAC
[ENA]
¢þ
>WENV180748630
ODHO01000010
[ODHO] human metagenome; G_DNA_Posterior fornix
1658
1739
+
Tyr
GTA
[ENA]
¢þ
>WENV180748658
ODHO01000105
[ODHO] human metagenome; G_DNA_Posterior fornix
1663
1589
-
Arg
CCT
[ENA]
¢þ
>WENV180748631
ODHO01000010
[ODHO] human metagenome; G_DNA_Posterior fornix
1773
1846
+
Gln
TTG
[ENA]
¢þ
>WENV180748644
ODHO01000066
[ODHO] human metagenome; G_DNA_Posterior fornix
2301
2215
-
Leu
CAG
[ENA]
¢þ
>WENV180748663
ODHO01000123
[ODHO] human metagenome; G_DNA_Posterior fornix
3746
3672
-
Asn
GTT
[ENA]
¢þ
>WENV180748652
ODHO01000085
[ODHO] human metagenome; G_DNA_Posterior fornix
4534
4608
+
Arg
ACG
[ENA]
¢þ
>WENV180748653
ODHO01000085
[ODHO] human metagenome; G_DNA_Posterior fornix
4616
4689
+
Pro
TGG
[ENA]
¢þ
>WENV180748641
ODHO01000027
[ODHO] human metagenome; G_DNA_Posterior fornix
8204
8116
-
Ser
CGA
[ENA]
¢þ
>WENV180748651
ODHO01000078
[ODHO] human metagenome; G_DNA_Posterior fornix
8434
8508
+
Lys
CTT
[ENA]
¢þ
>WENV180748628
ODHO01000005
[ODHO] human metagenome; G_DNA_Posterior fornix
10496
10423
-
Gln
TTG
[ENA]
¢þ
>WENV180748643
ODHO01000060
[ODHO] human metagenome; G_DNA_Posterior fornix
11416
11344
-
Trp
CCA
[ENA]
¢þ
>WENV180748642
ODHO01000060
[ODHO] human metagenome; G_DNA_Posterior fornix
11970
11895
-
Gln
TTG
[ENA]
¢þ
>WENV180748632
ODHO01000010
[ODHO] human metagenome; G_DNA_Posterior fornix
18788
18873
+
Leu
AAG
[ENA]
¢þ
>WENV180748627
ODHO01000005
[ODHO] human metagenome; G_DNA_Posterior fornix
20846
20771
-
Thr
CGT
[ENA]
¢þ
>WENV180748640
ODHO01000023
[ODHO] human metagenome; G_DNA_Posterior fornix
22345
22419
+
Thr
AGT
[ENA]
¢þ
>WENV180748639
ODHO01000017
[ODHO] human metagenome; G_DNA_Posterior fornix
34181
34108
-
Pro
CGG
[ENA]
¢þ
>WENV180748629
ODHO01000007
[ODHO] human metagenome; G_DNA_Posterior fornix
36328
36253
-
Arg
TCT
[ENA]
¢þ
>WENV180748624
ODHO01000004
[ODHO] human metagenome; G_DNA_Posterior fornix
36348
36418
+
Gly
CCC
[ENA]
¢þ
>WENV180748621
ODHO01000001
[ODHO] human metagenome; G_DNA_Posterior fornix
36401
36474
+
Arg
CCG
[ENA]
¢þ
>WENV180748633
ODHO01000010
[ODHO] human metagenome; G_DNA_Posterior fornix
36638
36725
+
Ser
TGA
[ENA]
¢þ
>WENV180748634
ODHO01000010
[ODHO] human metagenome; G_DNA_Posterior fornix
36731
36806
+
Asp
GTC
[ENA]
¢þ
>WENV180748635
ODHO01000010
[ODHO] human metagenome; G_DNA_Posterior fornix
36812
36887
+
His
GTG
[ENA]
¢þ
>WENV180748636
ODHO01000010
[ODHO] human metagenome; G_DNA_Posterior fornix
36891
36965
+
Val
TAC
[ENA]
¢þ
>WENV180748623
ODHO01000002
[ODHO] human metagenome; G_DNA_Posterior fornix
42102
42030
-
Gln
CTG
[ENA]
¢þ
>WENV180748622
ODHO01000002
[ODHO] human metagenome; G_DNA_Posterior fornix
42180
42107
-
Glu
CTC
[ENA]
¢þ
>WENV180748625
ODHO01000004
[ODHO] human metagenome; G_DNA_Posterior fornix
51058
50986
-
Thr
GGT
[ENA]
¢þ
>WENV180748626
ODHO01000005
[ODHO] human metagenome; G_DNA_Posterior fornix
52892
52818
-
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK