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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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|
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HOW TO USE
tRNA gene List
[ODMH] human metagenome; G_DNA_Anterior nares
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180887283
ODMH01006125
[ODMH] human metagenome; G_DNA_Anterior nares
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180887293
ODMH01009834
[ODMH] human metagenome; G_DNA_Anterior nares
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180887275
ODMH01002415
[ODMH] human metagenome; G_DNA_Anterior nares
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180887285
ODMH01006723
[ODMH] human metagenome; G_DNA_Anterior nares
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180887260
ODMH01001199
[ODMH] human metagenome; G_DNA_Anterior nares
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180887270
ODMH01001582
[ODMH] human metagenome; G_DNA_Anterior nares
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180887290
ODMH01008646
[ODMH] human metagenome; G_DNA_Anterior nares
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180887292
ODMH01009597
[ODMH] human metagenome; G_DNA_Anterior nares
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180887278
ODMH01002634
[ODMH] human metagenome; G_DNA_Anterior nares
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180887289
ODMH01008183
[ODMH] human metagenome; G_DNA_Anterior nares
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180887294
ODMH01009834
[ODMH] human metagenome; G_DNA_Anterior nares
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180887256
ODMH01000726
[ODMH] human metagenome; G_DNA_Anterior nares
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180887286
ODMH01006723
[ODMH] human metagenome; G_DNA_Anterior nares
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180887265
ODMH01001346
[ODMH] human metagenome; G_DNA_Anterior nares
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180887233
ODMH01000023
[ODMH] human metagenome; G_DNA_Anterior nares
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180887287
ODMH01007775
[ODMH] human metagenome; G_DNA_Anterior nares
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180887291
ODMH01008728
[ODMH] human metagenome; G_DNA_Anterior nares
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180887272
ODMH01001721
[ODMH] human metagenome; G_DNA_Anterior nares
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180887277
ODMH01002602
[ODMH] human metagenome; G_DNA_Anterior nares
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180887284
ODMH01006503
[ODMH] human metagenome; G_DNA_Anterior nares
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180887248
ODMH01000429
[ODMH] human metagenome; G_DNA_Anterior nares
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180887288
ODMH01008183
[ODMH] human metagenome; G_DNA_Anterior nares
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180887258
ODMH01001032
[ODMH] human metagenome; G_DNA_Anterior nares
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180887282
ODMH01003947
[ODMH] human metagenome; G_DNA_Anterior nares
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180887264
ODMH01001346
[ODMH] human metagenome; G_DNA_Anterior nares
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180887280
ODMH01003389
[ODMH] human metagenome; G_DNA_Anterior nares
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180887281
ODMH01003907
[ODMH] human metagenome; G_DNA_Anterior nares
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180887267
ODMH01001403
[ODMH] human metagenome; G_DNA_Anterior nares
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180887268
ODMH01001408
[ODMH] human metagenome; G_DNA_Anterior nares
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180887255
ODMH01000726
[ODMH] human metagenome; G_DNA_Anterior nares
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180887276
ODMH01002487
[ODMH] human metagenome; G_DNA_Anterior nares
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180887279
ODMH01002917
[ODMH] human metagenome; G_DNA_Anterior nares
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180887254
ODMH01000693
[ODMH] human metagenome; G_DNA_Anterior nares
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180887274
ODMH01001853
[ODMH] human metagenome; G_DNA_Anterior nares
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180887261
ODMH01001199
[ODMH] human metagenome; G_DNA_Anterior nares
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180887263
ODMH01001268
[ODMH] human metagenome; G_DNA_Anterior nares
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180887238
ODMH01000061
[ODMH] human metagenome; G_DNA_Anterior nares
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180887243
ODMH01000316
[ODMH] human metagenome; G_DNA_Anterior nares
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180887273
ODMH01001853
[ODMH] human metagenome; G_DNA_Anterior nares
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180887266
ODMH01001403
[ODMH] human metagenome; G_DNA_Anterior nares
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180887257
ODMH01001011
[ODMH] human metagenome; G_DNA_Anterior nares
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180887259
ODMH01001097
[ODMH] human metagenome; G_DNA_Anterior nares
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180887271
ODMH01001663
[ODMH] human metagenome; G_DNA_Anterior nares
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180887262
ODMH01001199
[ODMH] human metagenome; G_DNA_Anterior nares
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180887244
ODMH01000316
[ODMH] human metagenome; G_DNA_Anterior nares
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180887246
ODMH01000353
[ODMH] human metagenome; G_DNA_Anterior nares
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180887269
ODMH01001520
[ODMH] human metagenome; G_DNA_Anterior nares
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180887236
ODMH01000059
[ODMH] human metagenome; G_DNA_Anterior nares
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180887253
ODMH01000587
[ODMH] human metagenome; G_DNA_Anterior nares
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180887251
ODMH01000538
[ODMH] human metagenome; G_DNA_Anterior nares
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180887250
ODMH01000494
[ODMH] human metagenome; G_DNA_Anterior nares
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180887252
ODMH01000553
[ODMH] human metagenome; G_DNA_Anterior nares
815
890
+
His
GTG
[ENA]
¢þ
>WENV180887241
ODMH01000151
[ODMH] human metagenome; G_DNA_Anterior nares
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180887249
ODMH01000482
[ODMH] human metagenome; G_DNA_Anterior nares
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180887247
ODMH01000353
[ODMH] human metagenome; G_DNA_Anterior nares
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180887245
ODMH01000318
[ODMH] human metagenome; G_DNA_Anterior nares
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180887242
ODMH01000219
[ODMH] human metagenome; G_DNA_Anterior nares
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180887237
ODMH01000061
[ODMH] human metagenome; G_DNA_Anterior nares
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180887234
ODMH01000038
[ODMH] human metagenome; G_DNA_Anterior nares
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180887240
ODMH01000143
[ODMH] human metagenome; G_DNA_Anterior nares
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180887239
ODMH01000063
[ODMH] human metagenome; G_DNA_Anterior nares
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180887235
ODMH01000038
[ODMH] human metagenome; G_DNA_Anterior nares
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK