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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[ODMW] human metagenome; G_DNA_Posterior fornix
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180895231
ODMW01006125
[ODMW] human metagenome; G_DNA_Posterior fornix
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180895241
ODMW01009834
[ODMW] human metagenome; G_DNA_Posterior fornix
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180895223
ODMW01002415
[ODMW] human metagenome; G_DNA_Posterior fornix
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180895233
ODMW01006723
[ODMW] human metagenome; G_DNA_Posterior fornix
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180895208
ODMW01001199
[ODMW] human metagenome; G_DNA_Posterior fornix
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180895218
ODMW01001582
[ODMW] human metagenome; G_DNA_Posterior fornix
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180895238
ODMW01008646
[ODMW] human metagenome; G_DNA_Posterior fornix
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180895240
ODMW01009597
[ODMW] human metagenome; G_DNA_Posterior fornix
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180895226
ODMW01002634
[ODMW] human metagenome; G_DNA_Posterior fornix
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180895237
ODMW01008183
[ODMW] human metagenome; G_DNA_Posterior fornix
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180895242
ODMW01009834
[ODMW] human metagenome; G_DNA_Posterior fornix
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180895204
ODMW01000726
[ODMW] human metagenome; G_DNA_Posterior fornix
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180895234
ODMW01006723
[ODMW] human metagenome; G_DNA_Posterior fornix
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180895213
ODMW01001346
[ODMW] human metagenome; G_DNA_Posterior fornix
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180895181
ODMW01000023
[ODMW] human metagenome; G_DNA_Posterior fornix
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180895235
ODMW01007775
[ODMW] human metagenome; G_DNA_Posterior fornix
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180895239
ODMW01008728
[ODMW] human metagenome; G_DNA_Posterior fornix
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180895220
ODMW01001721
[ODMW] human metagenome; G_DNA_Posterior fornix
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180895225
ODMW01002602
[ODMW] human metagenome; G_DNA_Posterior fornix
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180895232
ODMW01006503
[ODMW] human metagenome; G_DNA_Posterior fornix
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180895196
ODMW01000429
[ODMW] human metagenome; G_DNA_Posterior fornix
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180895236
ODMW01008183
[ODMW] human metagenome; G_DNA_Posterior fornix
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180895206
ODMW01001032
[ODMW] human metagenome; G_DNA_Posterior fornix
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180895230
ODMW01003947
[ODMW] human metagenome; G_DNA_Posterior fornix
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180895212
ODMW01001346
[ODMW] human metagenome; G_DNA_Posterior fornix
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180895228
ODMW01003389
[ODMW] human metagenome; G_DNA_Posterior fornix
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180895229
ODMW01003907
[ODMW] human metagenome; G_DNA_Posterior fornix
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180895215
ODMW01001403
[ODMW] human metagenome; G_DNA_Posterior fornix
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180895216
ODMW01001408
[ODMW] human metagenome; G_DNA_Posterior fornix
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180895203
ODMW01000726
[ODMW] human metagenome; G_DNA_Posterior fornix
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180895224
ODMW01002487
[ODMW] human metagenome; G_DNA_Posterior fornix
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180895227
ODMW01002917
[ODMW] human metagenome; G_DNA_Posterior fornix
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180895202
ODMW01000693
[ODMW] human metagenome; G_DNA_Posterior fornix
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180895222
ODMW01001853
[ODMW] human metagenome; G_DNA_Posterior fornix
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180895209
ODMW01001199
[ODMW] human metagenome; G_DNA_Posterior fornix
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180895211
ODMW01001268
[ODMW] human metagenome; G_DNA_Posterior fornix
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180895186
ODMW01000061
[ODMW] human metagenome; G_DNA_Posterior fornix
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180895191
ODMW01000316
[ODMW] human metagenome; G_DNA_Posterior fornix
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180895221
ODMW01001853
[ODMW] human metagenome; G_DNA_Posterior fornix
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180895214
ODMW01001403
[ODMW] human metagenome; G_DNA_Posterior fornix
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180895205
ODMW01001011
[ODMW] human metagenome; G_DNA_Posterior fornix
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180895207
ODMW01001097
[ODMW] human metagenome; G_DNA_Posterior fornix
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180895219
ODMW01001663
[ODMW] human metagenome; G_DNA_Posterior fornix
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180895210
ODMW01001199
[ODMW] human metagenome; G_DNA_Posterior fornix
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180895192
ODMW01000316
[ODMW] human metagenome; G_DNA_Posterior fornix
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180895194
ODMW01000353
[ODMW] human metagenome; G_DNA_Posterior fornix
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180895217
ODMW01001520
[ODMW] human metagenome; G_DNA_Posterior fornix
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180895184
ODMW01000059
[ODMW] human metagenome; G_DNA_Posterior fornix
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180895201
ODMW01000587
[ODMW] human metagenome; G_DNA_Posterior fornix
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180895199
ODMW01000538
[ODMW] human metagenome; G_DNA_Posterior fornix
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180895198
ODMW01000494
[ODMW] human metagenome; G_DNA_Posterior fornix
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180895200
ODMW01000553
[ODMW] human metagenome; G_DNA_Posterior fornix
815
890
+
His
GTG
[ENA]
¢þ
>WENV180895189
ODMW01000151
[ODMW] human metagenome; G_DNA_Posterior fornix
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180895197
ODMW01000482
[ODMW] human metagenome; G_DNA_Posterior fornix
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180895195
ODMW01000353
[ODMW] human metagenome; G_DNA_Posterior fornix
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180895193
ODMW01000318
[ODMW] human metagenome; G_DNA_Posterior fornix
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180895190
ODMW01000219
[ODMW] human metagenome; G_DNA_Posterior fornix
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180895185
ODMW01000061
[ODMW] human metagenome; G_DNA_Posterior fornix
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180895182
ODMW01000038
[ODMW] human metagenome; G_DNA_Posterior fornix
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180895188
ODMW01000143
[ODMW] human metagenome; G_DNA_Posterior fornix
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180895187
ODMW01000063
[ODMW] human metagenome; G_DNA_Posterior fornix
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180895183
ODMW01000038
[ODMW] human metagenome; G_DNA_Posterior fornix
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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