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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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|
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HOW TO USE
tRNA gene List
[ODOC] human metagenome; G_DNA_Anterior nares
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180899231
ODOC01006125
[ODOC] human metagenome; G_DNA_Anterior nares
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180899241
ODOC01009834
[ODOC] human metagenome; G_DNA_Anterior nares
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180899223
ODOC01002415
[ODOC] human metagenome; G_DNA_Anterior nares
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180899233
ODOC01006723
[ODOC] human metagenome; G_DNA_Anterior nares
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180899208
ODOC01001199
[ODOC] human metagenome; G_DNA_Anterior nares
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180899218
ODOC01001582
[ODOC] human metagenome; G_DNA_Anterior nares
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180899238
ODOC01008646
[ODOC] human metagenome; G_DNA_Anterior nares
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180899240
ODOC01009597
[ODOC] human metagenome; G_DNA_Anterior nares
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180899226
ODOC01002634
[ODOC] human metagenome; G_DNA_Anterior nares
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180899237
ODOC01008183
[ODOC] human metagenome; G_DNA_Anterior nares
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180899242
ODOC01009834
[ODOC] human metagenome; G_DNA_Anterior nares
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180899204
ODOC01000726
[ODOC] human metagenome; G_DNA_Anterior nares
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180899234
ODOC01006723
[ODOC] human metagenome; G_DNA_Anterior nares
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180899213
ODOC01001346
[ODOC] human metagenome; G_DNA_Anterior nares
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180899181
ODOC01000023
[ODOC] human metagenome; G_DNA_Anterior nares
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180899235
ODOC01007775
[ODOC] human metagenome; G_DNA_Anterior nares
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180899239
ODOC01008728
[ODOC] human metagenome; G_DNA_Anterior nares
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180899220
ODOC01001721
[ODOC] human metagenome; G_DNA_Anterior nares
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180899225
ODOC01002602
[ODOC] human metagenome; G_DNA_Anterior nares
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180899232
ODOC01006503
[ODOC] human metagenome; G_DNA_Anterior nares
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180899196
ODOC01000429
[ODOC] human metagenome; G_DNA_Anterior nares
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180899236
ODOC01008183
[ODOC] human metagenome; G_DNA_Anterior nares
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180899206
ODOC01001032
[ODOC] human metagenome; G_DNA_Anterior nares
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180899230
ODOC01003947
[ODOC] human metagenome; G_DNA_Anterior nares
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180899212
ODOC01001346
[ODOC] human metagenome; G_DNA_Anterior nares
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180899228
ODOC01003389
[ODOC] human metagenome; G_DNA_Anterior nares
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180899229
ODOC01003907
[ODOC] human metagenome; G_DNA_Anterior nares
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180899215
ODOC01001403
[ODOC] human metagenome; G_DNA_Anterior nares
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180899216
ODOC01001408
[ODOC] human metagenome; G_DNA_Anterior nares
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180899203
ODOC01000726
[ODOC] human metagenome; G_DNA_Anterior nares
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180899224
ODOC01002487
[ODOC] human metagenome; G_DNA_Anterior nares
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180899227
ODOC01002917
[ODOC] human metagenome; G_DNA_Anterior nares
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180899202
ODOC01000693
[ODOC] human metagenome; G_DNA_Anterior nares
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180899222
ODOC01001853
[ODOC] human metagenome; G_DNA_Anterior nares
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180899209
ODOC01001199
[ODOC] human metagenome; G_DNA_Anterior nares
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180899211
ODOC01001268
[ODOC] human metagenome; G_DNA_Anterior nares
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180899186
ODOC01000061
[ODOC] human metagenome; G_DNA_Anterior nares
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180899191
ODOC01000316
[ODOC] human metagenome; G_DNA_Anterior nares
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180899221
ODOC01001853
[ODOC] human metagenome; G_DNA_Anterior nares
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180899214
ODOC01001403
[ODOC] human metagenome; G_DNA_Anterior nares
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180899205
ODOC01001011
[ODOC] human metagenome; G_DNA_Anterior nares
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180899207
ODOC01001097
[ODOC] human metagenome; G_DNA_Anterior nares
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180899219
ODOC01001663
[ODOC] human metagenome; G_DNA_Anterior nares
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180899210
ODOC01001199
[ODOC] human metagenome; G_DNA_Anterior nares
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180899192
ODOC01000316
[ODOC] human metagenome; G_DNA_Anterior nares
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180899194
ODOC01000353
[ODOC] human metagenome; G_DNA_Anterior nares
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180899217
ODOC01001520
[ODOC] human metagenome; G_DNA_Anterior nares
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180899184
ODOC01000059
[ODOC] human metagenome; G_DNA_Anterior nares
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180899201
ODOC01000587
[ODOC] human metagenome; G_DNA_Anterior nares
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180899199
ODOC01000538
[ODOC] human metagenome; G_DNA_Anterior nares
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180899198
ODOC01000494
[ODOC] human metagenome; G_DNA_Anterior nares
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180899200
ODOC01000553
[ODOC] human metagenome; G_DNA_Anterior nares
815
890
+
His
GTG
[ENA]
¢þ
>WENV180899189
ODOC01000151
[ODOC] human metagenome; G_DNA_Anterior nares
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180899197
ODOC01000482
[ODOC] human metagenome; G_DNA_Anterior nares
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180899195
ODOC01000353
[ODOC] human metagenome; G_DNA_Anterior nares
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180899193
ODOC01000318
[ODOC] human metagenome; G_DNA_Anterior nares
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180899190
ODOC01000219
[ODOC] human metagenome; G_DNA_Anterior nares
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180899185
ODOC01000061
[ODOC] human metagenome; G_DNA_Anterior nares
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180899182
ODOC01000038
[ODOC] human metagenome; G_DNA_Anterior nares
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180899188
ODOC01000143
[ODOC] human metagenome; G_DNA_Anterior nares
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180899187
ODOC01000063
[ODOC] human metagenome; G_DNA_Anterior nares
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180899183
ODOC01000038
[ODOC] human metagenome; G_DNA_Anterior nares
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK