This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ODPE] human metagenome; G_DNA_Anterior nares
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180903976
ODPE01006125
[ODPE] human metagenome; G_DNA_Anterior nares
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180903986
ODPE01009834
[ODPE] human metagenome; G_DNA_Anterior nares
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180903968
ODPE01002415
[ODPE] human metagenome; G_DNA_Anterior nares
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180903978
ODPE01006723
[ODPE] human metagenome; G_DNA_Anterior nares
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180903953
ODPE01001199
[ODPE] human metagenome; G_DNA_Anterior nares
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180903963
ODPE01001582
[ODPE] human metagenome; G_DNA_Anterior nares
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180903983
ODPE01008646
[ODPE] human metagenome; G_DNA_Anterior nares
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180903985
ODPE01009597
[ODPE] human metagenome; G_DNA_Anterior nares
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180903971
ODPE01002634
[ODPE] human metagenome; G_DNA_Anterior nares
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180903982
ODPE01008183
[ODPE] human metagenome; G_DNA_Anterior nares
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180903987
ODPE01009834
[ODPE] human metagenome; G_DNA_Anterior nares
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180903949
ODPE01000726
[ODPE] human metagenome; G_DNA_Anterior nares
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180903979
ODPE01006723
[ODPE] human metagenome; G_DNA_Anterior nares
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180903958
ODPE01001346
[ODPE] human metagenome; G_DNA_Anterior nares
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180903926
ODPE01000023
[ODPE] human metagenome; G_DNA_Anterior nares
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180903980
ODPE01007775
[ODPE] human metagenome; G_DNA_Anterior nares
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180903984
ODPE01008728
[ODPE] human metagenome; G_DNA_Anterior nares
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180903965
ODPE01001721
[ODPE] human metagenome; G_DNA_Anterior nares
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180903970
ODPE01002602
[ODPE] human metagenome; G_DNA_Anterior nares
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180903977
ODPE01006503
[ODPE] human metagenome; G_DNA_Anterior nares
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180903941
ODPE01000429
[ODPE] human metagenome; G_DNA_Anterior nares
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180903981
ODPE01008183
[ODPE] human metagenome; G_DNA_Anterior nares
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180903951
ODPE01001032
[ODPE] human metagenome; G_DNA_Anterior nares
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180903975
ODPE01003947
[ODPE] human metagenome; G_DNA_Anterior nares
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180903957
ODPE01001346
[ODPE] human metagenome; G_DNA_Anterior nares
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180903973
ODPE01003389
[ODPE] human metagenome; G_DNA_Anterior nares
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180903974
ODPE01003907
[ODPE] human metagenome; G_DNA_Anterior nares
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180903960
ODPE01001403
[ODPE] human metagenome; G_DNA_Anterior nares
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180903961
ODPE01001408
[ODPE] human metagenome; G_DNA_Anterior nares
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180903948
ODPE01000726
[ODPE] human metagenome; G_DNA_Anterior nares
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180903969
ODPE01002487
[ODPE] human metagenome; G_DNA_Anterior nares
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180903972
ODPE01002917
[ODPE] human metagenome; G_DNA_Anterior nares
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180903947
ODPE01000693
[ODPE] human metagenome; G_DNA_Anterior nares
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180903967
ODPE01001853
[ODPE] human metagenome; G_DNA_Anterior nares
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180903954
ODPE01001199
[ODPE] human metagenome; G_DNA_Anterior nares
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180903956
ODPE01001268
[ODPE] human metagenome; G_DNA_Anterior nares
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180903931
ODPE01000061
[ODPE] human metagenome; G_DNA_Anterior nares
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180903936
ODPE01000316
[ODPE] human metagenome; G_DNA_Anterior nares
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180903966
ODPE01001853
[ODPE] human metagenome; G_DNA_Anterior nares
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180903959
ODPE01001403
[ODPE] human metagenome; G_DNA_Anterior nares
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180903950
ODPE01001011
[ODPE] human metagenome; G_DNA_Anterior nares
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180903952
ODPE01001097
[ODPE] human metagenome; G_DNA_Anterior nares
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180903964
ODPE01001663
[ODPE] human metagenome; G_DNA_Anterior nares
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180903955
ODPE01001199
[ODPE] human metagenome; G_DNA_Anterior nares
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180903937
ODPE01000316
[ODPE] human metagenome; G_DNA_Anterior nares
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180903939
ODPE01000353
[ODPE] human metagenome; G_DNA_Anterior nares
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180903962
ODPE01001520
[ODPE] human metagenome; G_DNA_Anterior nares
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180903929
ODPE01000059
[ODPE] human metagenome; G_DNA_Anterior nares
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180903946
ODPE01000587
[ODPE] human metagenome; G_DNA_Anterior nares
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180903944
ODPE01000538
[ODPE] human metagenome; G_DNA_Anterior nares
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180903943
ODPE01000494
[ODPE] human metagenome; G_DNA_Anterior nares
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180903945
ODPE01000553
[ODPE] human metagenome; G_DNA_Anterior nares
815
890
+
His
GTG
[ENA]
¢þ
>WENV180903934
ODPE01000151
[ODPE] human metagenome; G_DNA_Anterior nares
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180903942
ODPE01000482
[ODPE] human metagenome; G_DNA_Anterior nares
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180903940
ODPE01000353
[ODPE] human metagenome; G_DNA_Anterior nares
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180903938
ODPE01000318
[ODPE] human metagenome; G_DNA_Anterior nares
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180903935
ODPE01000219
[ODPE] human metagenome; G_DNA_Anterior nares
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180903930
ODPE01000061
[ODPE] human metagenome; G_DNA_Anterior nares
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180903927
ODPE01000038
[ODPE] human metagenome; G_DNA_Anterior nares
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180903933
ODPE01000143
[ODPE] human metagenome; G_DNA_Anterior nares
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180903932
ODPE01000063
[ODPE] human metagenome; G_DNA_Anterior nares
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180903928
ODPE01000038
[ODPE] human metagenome; G_DNA_Anterior nares
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK