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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[ODSL] human metagenome; G_DNA_Anterior nares
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180912685
ODSL01022486
[ODSL] human metagenome; G_DNA_Anterior nares
1
74
+
fMet
CAT
[ENA]
¢þ
>WENV180912649
ODSL01000052
[ODSL] human metagenome; G_DNA_Anterior nares
4
79
+
Asp
GTC
[ENA]
¢þ
>WENV180912671
ODSL01008374
[ODSL] human metagenome; G_DNA_Anterior nares
43
117
+
Asp
GTC
[ENA]
¢þ
>WENV180912682
ODSL01021612
[ODSL] human metagenome; G_DNA_Anterior nares
61
149
+
Leu
TAA
[ENA]
¢þ
>WENV180912657
ODSL01000096
[ODSL] human metagenome; G_DNA_Anterior nares
63
137
+
Asn
GTT
[ENA]
¢þ
>WENV180912684
ODSL01022482
[ODSL] human metagenome; G_DNA_Anterior nares
65
140
+
Val
TAC
[ENA]
¢þ
>WENV180912660
ODSL01000632
[ODSL] human metagenome; G_DNA_Anterior nares
75
1
-
Ile
GAT
[ENA]
¢þ
>WENV180912672
ODSL01008863
[ODSL] human metagenome; G_DNA_Anterior nares
86
161
+
His
GTG
[ENA]
¢þ
>WENV180912650
ODSL01000052
[ODSL] human metagenome; G_DNA_Anterior nares
96
168
+
Phe
GAA
[ENA]
¢þ
>WENV180912679
ODSL01020474
[ODSL] human metagenome; G_DNA_Anterior nares
97
23
-
Met
CAT
[ENA]
¢þ
>WENV180912675
ODSL01017874
[ODSL] human metagenome; G_DNA_Anterior nares
109
183
+
Thr
TGT
[ENA]
¢þ
>WENV180912677
ODSL01018893
[ODSL] human metagenome; G_DNA_Anterior nares
134
206
+
Arg
CCT
[ENA]
¢þ
>WENV180912683
ODSL01022430
[ODSL] human metagenome; G_DNA_Anterior nares
136
60
-
Ile
GAT
[ENA]
¢þ
>WENV180912680
ODSL01021075
[ODSL] human metagenome; G_DNA_Anterior nares
147
61
-
Leu
GAG
[ENA]
¢þ
>WENV180912674
ODSL01010758
[ODSL] human metagenome; G_DNA_Anterior nares
156
229
+
Asn
GTT
[ENA]
¢þ
>WENV180912678
ODSL01019205
[ODSL] human metagenome; G_DNA_Anterior nares
166
83
-
Tyr
GTA
[ENA]
¢þ
>WENV180912681
ODSL01021500
[ODSL] human metagenome; G_DNA_Anterior nares
170
95
-
Phe
GAA
[ENA]
¢þ
>WENV180912676
ODSL01018304
[ODSL] human metagenome; G_DNA_Anterior nares
172
101
-
Gln
CTG
[ENA]
¢þ
>WENV180912673
ODSL01009365
[ODSL] human metagenome; G_DNA_Anterior nares
179
254
+
Pro
TGG
[ENA]
¢þ
>WENV180912651
ODSL01000052
[ODSL] human metagenome; G_DNA_Anterior nares
182
257
+
His
GTG
[ENA]
¢þ
>WENV180912667
ODSL01006687
[ODSL] human metagenome; G_DNA_Anterior nares
200
273
+
Trp
CCA
[ENA]
¢þ
>WENV180912666
ODSL01006320
[ODSL] human metagenome; G_DNA_Anterior nares
214
140
-
Thr
TGT
[ENA]
¢þ
>WENV180912668
ODSL01007092
[ODSL] human metagenome; G_DNA_Anterior nares
220
295
+
Val
TAC
[ENA]
¢þ
>WENV180912669
ODSL01007120
[ODSL] human metagenome; G_DNA_Anterior nares
239
310
+
Gln
TTG
[ENA]
¢þ
>WENV180912670
ODSL01007950
[ODSL] human metagenome; G_DNA_Anterior nares
262
189
-
Arg
TCT
[ENA]
¢þ
>WENV180912652
ODSL01000052
[ODSL] human metagenome; G_DNA_Anterior nares
273
346
+
Gly
TCC
[ENA]
¢þ
>WENV180912663
ODSL01003818
[ODSL] human metagenome; G_DNA_Anterior nares
305
379
+
Ile2
CAT
[ENA]
¢þ
>WENV180912653
ODSL01000052
[ODSL] human metagenome; G_DNA_Anterior nares
361
435
+
Asn
GTT
[ENA]
¢þ
>WENV180912665
ODSL01005732
[ODSL] human metagenome; G_DNA_Anterior nares
375
303
-
Glu
TTC
[ENA]
¢þ
>WENV180912654
ODSL01000052
[ODSL] human metagenome; G_DNA_Anterior nares
436
509
+
Glu
TTC
[ENA]
¢þ
>WENV180912664
ODSL01004102
[ODSL] human metagenome; G_DNA_Anterior nares
439
367
-
Thr
GGT
[ENA]
¢þ
>WENV180912661
ODSL01001064
[ODSL] human metagenome; G_DNA_Anterior nares
498
410
-
Ser
GGA
[ENA]
¢þ
>WENV180912655
ODSL01000052
[ODSL] human metagenome; G_DNA_Anterior nares
563
651
+
Ser
GGA
[ENA]
¢þ
>WENV180912659
ODSL01000438
[ODSL] human metagenome; G_DNA_Anterior nares
659
732
+
Lys
TTT
[ENA]
¢þ
>WENV180912662
ODSL01001066
[ODSL] human metagenome; G_DNA_Anterior nares
681
607
-
Ala
TGC
[ENA]
¢þ
>WENV180912658
ODSL01000209
[ODSL] human metagenome; G_DNA_Anterior nares
1093
1019
-
Ala
TGC
[ENA]
¢þ
>WENV180912656
ODSL01000085
[ODSL] human metagenome; G_DNA_Anterior nares
1863
1778
-
Ser
TGA
[ENA]
¢þ
>WENV180912643
ODSL01000021
[ODSL] human metagenome; G_DNA_Anterior nares
9247
9155
-
Ser
TGA
[ENA]
¢þ
>WENV180912648
ODSL01000028
[ODSL] human metagenome; G_DNA_Anterior nares
9495
9419
-
Arg
TCT
[ENA]
¢þ
>WENV180912642
ODSL01000019
[ODSL] human metagenome; G_DNA_Anterior nares
20338
20266
-
Asp
GTC
[ENA]
¢þ
>WENV180912641
ODSL01000019
[ODSL] human metagenome; G_DNA_Anterior nares
20420
20346
-
Glu
TTC
[ENA]
¢þ
>WENV180912617
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
22998
23073
+
Val
TAC
[ENA]
¢þ
>WENV180912618
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23090
23165
+
Thr
TGT
[ENA]
¢þ
>WENV180912619
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23171
23246
+
Lys
TTT
[ENA]
¢þ
>WENV180912620
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23249
23332
+
Leu
TAG
[ENA]
¢þ
>WENV180912621
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23335
23409
+
Gly
GCC
[ENA]
¢þ
>WENV180912622
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23420
23508
+
Leu
TAA
[ENA]
¢þ
>WENV180912623
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23526
23601
+
Arg
ACG
[ENA]
¢þ
>WENV180912624
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23610
23683
+
Pro
TGG
[ENA]
¢þ
>WENV180912625
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23707
23782
+
Ala
TGC
[ENA]
¢þ
>WENV180912626
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23804
23878
+
Met
CAT
[ENA]
¢þ
>WENV180912627
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23906
23979
+
Ile2
CAT
[ENA]
¢þ
>WENV180912628
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
23988
24079
+
Ser
TGA
[ENA]
¢þ
>WENV180912629
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24089
24164
+
Asp
GTC
[ENA]
¢þ
>WENV180912630
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24203
24295
+
Ser
TGA
[ENA]
¢þ
>WENV180912631
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24309
24384
+
fMet
CAT
[ENA]
¢þ
>WENV180912632
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24393
24468
+
Asp
GTC
[ENA]
¢þ
>WENV180912633
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24485
24557
+
Phe
GAA
[ENA]
¢þ
>WENV180912634
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24565
24640
+
Thr
TGT
[ENA]
¢þ
>WENV180912635
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24645
24727
+
Tyr
GTA
[ENA]
¢þ
>WENV180912636
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24742
24815
+
Trp
CCA
[ENA]
¢þ
>WENV180912637
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24818
24892
+
His
GTG
[ENA]
¢þ
>WENV180912638
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24902
24973
+
Gln
TTG
[ENA]
¢þ
>WENV180912639
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
24979
25052
+
Cys
GCA
[ENA]
¢þ
>WENV180912640
ODSL01000014
[ODSL] human metagenome; G_DNA_Anterior nares
25351
25434
+
Leu
CAA
[ENA]
¢þ
>WENV180912610
ODSL01000002
[ODSL] human metagenome; G_DNA_Anterior nares
29989
30061
+
Arg
CCG
[ENA]
¢þ
>WENV180912646
ODSL01000024
[ODSL] human metagenome; G_DNA_Anterior nares
35988
36070
+
Leu
GAG
[ENA]
¢þ
>WENV180912647
ODSL01000024
[ODSL] human metagenome; G_DNA_Anterior nares
36092
36165
+
Gly
TCC
[ENA]
¢þ
>WENV180912645
ODSL01000023
[ODSL] human metagenome; G_DNA_Anterior nares
36897
36807
-
Ser
GCT
[ENA]
¢þ
>WENV180912644
ODSL01000023
[ODSL] human metagenome; G_DNA_Anterior nares
36973
36899
-
Asn
GTT
[ENA]
¢þ
>WENV180912616
ODSL01000012
[ODSL] human metagenome; G_DNA_Anterior nares
73519
73446
-
Lys
TTT
[ENA]
¢þ
>WENV180912615
ODSL01000012
[ODSL] human metagenome; G_DNA_Anterior nares
73597
73523
-
Gln
TTG
[ENA]
¢þ
>WENV180912614
ODSL01000012
[ODSL] human metagenome; G_DNA_Anterior nares
73690
73607
-
Tyr
GTA
[ENA]
¢þ
>WENV180912613
ODSL01000012
[ODSL] human metagenome; G_DNA_Anterior nares
73795
73720
-
Val
TAC
[ENA]
¢þ
>WENV180912612
ODSL01000012
[ODSL] human metagenome; G_DNA_Anterior nares
73875
73802
-
Glu
TTC
[ENA]
¢þ
>WENV180912611
ODSL01000012
[ODSL] human metagenome; G_DNA_Anterior nares
73950
73876
-
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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