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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[ODSO] human metagenome; G_DNA_Anterior nares
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180912875
ODSO01001155
[ODSO] human metagenome; G_DNA_Anterior nares
24
97
+
Ala
GGC
[ENA]
¢þ
>WENV180912881
ODSO01003988
[ODSO] human metagenome; G_DNA_Anterior nares
44
116
+
Gln
TTG
[ENA]
¢þ
>WENV180912882
ODSO01004051
[ODSO] human metagenome; G_DNA_Anterior nares
75
2
-
Ala
GGC
[ENA]
¢þ
>WENV180912870
ODSO01000085
[ODSO] human metagenome; G_DNA_Anterior nares
87
160
+
Gly
CCC
[ENA]
¢þ
>WENV180912879
ODSO01003520
[ODSO] human metagenome; G_DNA_Anterior nares
112
30
-
Leu
TAG
[ENA]
¢þ
>WENV180912878
ODSO01003268
[ODSO] human metagenome; G_DNA_Anterior nares
138
64
-
Ala
TGC
[ENA]
¢þ
>WENV180912876
ODSO01001464
[ODSO] human metagenome; G_DNA_Anterior nares
144
69
-
Thr
TGT
[ENA]
¢þ
>WENV180912880
ODSO01003816
[ODSO] human metagenome; G_DNA_Anterior nares
192
118
-
Leu
CAA
[ENA]
¢þ
>WENV180912877
ODSO01002527
[ODSO] human metagenome; G_DNA_Anterior nares
245
161
-
Leu
CAA
[ENA]
¢þ
>WENV180912874
ODSO01000606
[ODSO] human metagenome; G_DNA_Anterior nares
270
343
+
Asn
GTT
[ENA]
¢þ
>WENV180912871
ODSO01000196
[ODSO] human metagenome; G_DNA_Anterior nares
277
352
+
Gly
GCC
[ENA]
¢þ
>WENV180912872
ODSO01000196
[ODSO] human metagenome; G_DNA_Anterior nares
369
440
+
Cys
GCA
[ENA]
¢þ
>WENV180912873
ODSO01000196
[ODSO] human metagenome; G_DNA_Anterior nares
458
532
+
Val
GAC
[ENA]
¢þ
>WENV180912869
ODSO01000014
[ODSO] human metagenome; G_DNA_Anterior nares
757
681
-
Pro
CGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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