This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ODSP] human metagenome; G_DNA_Anterior nares
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180912892
ODSP01002123
[ODSP] human metagenome; G_DNA_Anterior nares
6
81
+
Val
TAC
[ENA]
¢þ
>WENV180912906
ODSP01004903
[ODSP] human metagenome; G_DNA_Anterior nares
15
98
+
Leu
TAG
[ENA]
¢þ
>WENV180912895
ODSP01002128
[ODSP] human metagenome; G_DNA_Anterior nares
17
90
+
Gly
TCC
[ENA]
¢þ
>WENV180912899
ODSP01002617
[ODSP] human metagenome; G_DNA_Anterior nares
18
91
+
Ala
TGC
[ENA]
¢þ
>WENV180912887
ODSP01000478
[ODSP] human metagenome; G_DNA_Anterior nares
23
96
+
Asn
GTT
[ENA]
¢þ
>WENV180912890
ODSP01001081
[ODSP] human metagenome; G_DNA_Anterior nares
26
109
+
Leu
CAG
[ENA]
¢þ
>WENV180912889
ODSP01000789
[ODSP] human metagenome; G_DNA_Anterior nares
71
146
+
Ala
TGC
[ENA]
¢þ
>WENV180912893
ODSP01002123
[ODSP] human metagenome; G_DNA_Anterior nares
98
173
+
Thr
TGT
[ENA]
¢þ
>WENV180912896
ODSP01002128
[ODSP] human metagenome; G_DNA_Anterior nares
105
179
+
Asn
GTT
[ENA]
¢þ
>WENV180912911
ODSP01006701
[ODSP] human metagenome; G_DNA_Anterior nares
116
189
+
Thr
TGT
[ENA]
¢þ
>WENV180912908
ODSP01005329
[ODSP] human metagenome; G_DNA_Anterior nares
124
197
+
Ala
CGC
[ENA]
¢þ
>WENV180912910
ODSP01005502
[ODSP] human metagenome; G_DNA_Anterior nares
125
213
+
Ser
GCT
[ENA]
¢þ
>WENV180912900
ODSP01003034
[ODSP] human metagenome; G_DNA_Anterior nares
127
200
+
Val
CAC
[ENA]
¢þ
>WENV180912909
ODSP01005339
[ODSP] human metagenome; G_DNA_Anterior nares
136
210
+
Glu
TTC
[ENA]
¢þ
>WENV180912884
ODSP01000089
[ODSP] human metagenome; G_DNA_Anterior nares
136
211
+
Thr
TGT
[ENA]
¢þ
>WENV180912907
ODSP01004973
[ODSP] human metagenome; G_DNA_Anterior nares
144
226
+
Tyr
GTA
[ENA]
¢þ
>WENV180912891
ODSP01001568
[ODSP] human metagenome; G_DNA_Anterior nares
150
76
-
Ile2
CAT
[ENA]
¢þ
>WENV180912901
ODSP01003042
[ODSP] human metagenome; G_DNA_Anterior nares
161
234
+
Ala
GGC
[ENA]
¢þ
>WENV180912903
ODSP01003436
[ODSP] human metagenome; G_DNA_Anterior nares
177
253
+
fMet
CAT
[ENA]
¢þ
>WENV180912897
ODSP01002128
[ODSP] human metagenome; G_DNA_Anterior nares
180
253
+
Glu
TTC
[ENA]
¢þ
>WENV180912894
ODSP01002123
[ODSP] human metagenome; G_DNA_Anterior nares
180
255
+
Lys
TTT
[ENA]
¢þ
>WENV180912888
ODSP01000775
[ODSP] human metagenome; G_DNA_Anterior nares
205
278
+
Trp
CCA
[ENA]
¢þ
>WENV180912904
ODSP01003499
[ODSP] human metagenome; G_DNA_Anterior nares
209
135
-
Gly
TCC
[ENA]
¢þ
>WENV180912902
ODSP01003073
[ODSP] human metagenome; G_DNA_Anterior nares
217
145
-
Gln
CTG
[ENA]
¢þ
>WENV180912898
ODSP01002163
[ODSP] human metagenome; G_DNA_Anterior nares
227
302
+
His
GTG
[ENA]
¢þ
>WENV180912885
ODSP01000339
[ODSP] human metagenome; G_DNA_Anterior nares
236
309
+
Thr
GGT
[ENA]
¢þ
>WENV180912905
ODSP01004277
[ODSP] human metagenome; G_DNA_Anterior nares
240
164
-
Pro
CGG
[ENA]
¢þ
>WENV180912886
ODSP01000339
[ODSP] human metagenome; G_DNA_Anterior nares
374
448
+
Met
CAT
[ENA]
¢þ
>WENV180912883
ODSP01000063
[ODSP] human metagenome; G_DNA_Anterior nares
455
528
+
Gly
TCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK