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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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|
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HOW TO USE
tRNA gene List
[ODTY] human metagenome; G_DNA_Anterior nares
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180940257
ODTY01005634
[ODTY] human metagenome; G_DNA_Anterior nares
4
92
+
Ser
TGA
[ENA]
¢þ
>WENV180940236
ODTY01001757
[ODTY] human metagenome; G_DNA_Anterior nares
38
111
+
Ala
CGC
[ENA]
¢þ
>WENV180940265
ODTY01008147
[ODTY] human metagenome; G_DNA_Anterior nares
42
128
+
Ser
GGA
[ENA]
¢þ
>WENV180940203
ODTY01000258
[ODTY] human metagenome; G_DNA_Anterior nares
47
132
+
Ser
GGA
[ENA]
¢þ
>WENV180940262
ODTY01006589
[ODTY] human metagenome; G_DNA_Anterior nares
62
137
+
Val
TAC
[ENA]
¢þ
>WENV180940250
ODTY01003597
[ODTY] human metagenome; G_DNA_Anterior nares
65
153
+
Leu
TAA
[ENA]
¢þ
>WENV180940261
ODTY01006437
[ODTY] human metagenome; G_DNA_Anterior nares
89
16
-
Lys
TTT
[ENA]
¢þ
>WENV180940244
ODTY01002690
[ODTY] human metagenome; G_DNA_Anterior nares
91
17
-
Lys
TTT
[ENA]
¢þ
>WENV180940206
ODTY01000308
[ODTY] human metagenome; G_DNA_Anterior nares
93
11
-
Tyr
GTA
[ENA]
¢þ
>WENV180940258
ODTY01005723
[ODTY] human metagenome; G_DNA_Anterior nares
106
185
+
Gln
TTG
[ENA]
¢þ
>WENV180940231
ODTY01000972
[ODTY] human metagenome; G_DNA_Anterior nares
135
61
-
Ile
GAT
[ENA]
¢þ
>WENV180940227
ODTY01000723
[ODTY] human metagenome; G_DNA_Anterior nares
140
212
+
Gln
TTG
[ENA]
¢þ
>WENV180940228
ODTY01000766
[ODTY] human metagenome; G_DNA_Anterior nares
150
224
+
Leu
TAA
[ENA]
¢þ
>WENV180940243
ODTY01002645
[ODTY] human metagenome; G_DNA_Anterior nares
153
80
-
Ala
GGC
[ENA]
¢þ
>WENV180940219
ODTY01000606
[ODTY] human metagenome; G_DNA_Anterior nares
153
81
-
Val
CAC
[ENA]
¢þ
>WENV180940263
ODTY01006589
[ODTY] human metagenome; G_DNA_Anterior nares
154
229
+
Thr
TGT
[ENA]
¢þ
>WENV180940249
ODTY01003539
[ODTY] human metagenome; G_DNA_Anterior nares
156
232
+
Pro
CGG
[ENA]
¢þ
>WENV180940251
ODTY01003597
[ODTY] human metagenome; G_DNA_Anterior nares
172
248
+
Arg
ACG
[ENA]
¢þ
>WENV180940234
ODTY01001585
[ODTY] human metagenome; G_DNA_Anterior nares
178
250
+
Gln
CTG
[ENA]
¢þ
>WENV180940242
ODTY01002302
[ODTY] human metagenome; G_DNA_Anterior nares
183
101
-
Tyr
GTA
[ENA]
¢þ
>WENV180940256
ODTY01005381
[ODTY] human metagenome; G_DNA_Anterior nares
196
122
-
Leu
TAA
[ENA]
¢þ
>WENV180940259
ODTY01005774
[ODTY] human metagenome; G_DNA_Anterior nares
197
124
-
Ala
GGC
[ENA]
¢þ
>WENV180940260
ODTY01005972
[ODTY] human metagenome; G_DNA_Anterior nares
202
129
-
Trp
CCA
[ENA]
¢þ
>WENV180940264
ODTY01006642
[ODTY] human metagenome; G_DNA_Anterior nares
203
278
+
His
GTG
[ENA]
¢þ
>WENV180940240
ODTY01002153
[ODTY] human metagenome; G_DNA_Anterior nares
207
282
+
Arg
CCG
[ENA]
¢þ
>WENV180940230
ODTY01000941
[ODTY] human metagenome; G_DNA_Anterior nares
223
298
+
Thr
CGT
[ENA]
¢þ
>WENV180940247
ODTY01002936
[ODTY] human metagenome; G_DNA_Anterior nares
237
310
+
Thr
GGT
[ENA]
¢þ
>WENV180940255
ODTY01004644
[ODTY] human metagenome; G_DNA_Anterior nares
240
313
+
Arg
TCT
[ENA]
¢þ
>WENV180940220
ODTY01000640
[ODTY] human metagenome; G_DNA_Anterior nares
262
345
+
Leu
CAG
[ENA]
¢þ
>WENV180940252
ODTY01003597
[ODTY] human metagenome; G_DNA_Anterior nares
269
342
+
Pro
TGG
[ENA]
¢þ
>WENV180940239
ODTY01002114
[ODTY] human metagenome; G_DNA_Anterior nares
277
352
+
Thr
CGT
[ENA]
¢þ
>WENV180940205
ODTY01000302
[ODTY] human metagenome; G_DNA_Anterior nares
288
213
-
Ile2
CAT
[ENA]
¢þ
>WENV180940254
ODTY01004040
[ODTY] human metagenome; G_DNA_Anterior nares
308
381
+
Arg
ACG
[ENA]
¢þ
>WENV180940213
ODTY01000401
[ODTY] human metagenome; G_DNA_Anterior nares
317
244
-
His
GTG
[ENA]
¢þ
>WENV180940238
ODTY01001837
[ODTY] human metagenome; G_DNA_Anterior nares
321
231
-
Ser
GCT
[ENA]
¢þ
>WENV180940246
ODTY01002808
[ODTY] human metagenome; G_DNA_Anterior nares
330
406
+
fMet
CAT
[ENA]
¢þ
>WENV180940235
ODTY01001585
[ODTY] human metagenome; G_DNA_Anterior nares
356
431
+
Glu
CTC
[ENA]
¢þ
>WENV180940237
ODTY01001800
[ODTY] human metagenome; G_DNA_Anterior nares
359
432
+
Asn
GTT
[ENA]
¢þ
>WENV180940253
ODTY01003597
[ODTY] human metagenome; G_DNA_Anterior nares
366
441
+
Ala
TGC
[ENA]
¢þ
>WENV180940202
ODTY01000228
[ODTY] human metagenome; G_DNA_Anterior nares
371
446
+
Pro
TGG
[ENA]
¢þ
>WENV180940204
ODTY01000265
[ODTY] human metagenome; G_DNA_Anterior nares
377
450
+
Arg
CCT
[ENA]
¢þ
>WENV180940233
ODTY01001388
[ODTY] human metagenome; G_DNA_Anterior nares
404
329
-
Trp
CCA
[ENA]
¢þ
>WENV180940199
ODTY01000165
[ODTY] human metagenome; G_DNA_Anterior nares
414
487
+
Val
CAC
[ENA]
¢þ
>WENV180940248
ODTY01002936
[ODTY] human metagenome; G_DNA_Anterior nares
416
490
+
Met
CAT
[ENA]
¢þ
>WENV180940197
ODTY01000083
[ODTY] human metagenome; G_DNA_Anterior nares
476
550
+
Pro
GGG
[ENA]
¢þ
>WENV180940241
ODTY01002155
[ODTY] human metagenome; G_DNA_Anterior nares
481
392
-
Ser
CGA
[ENA]
¢þ
>WENV180940226
ODTY01000699
[ODTY] human metagenome; G_DNA_Anterior nares
503
428
-
Phe
GAA
[ENA]
¢þ
>WENV180940216
ODTY01000606
[ODTY] human metagenome; G_DNA_Anterior nares
544
619
+
Gly
GCC
[ENA]
¢þ
>WENV180940245
ODTY01002716
[ODTY] human metagenome; G_DNA_Anterior nares
551
477
-
Pro
GGG
[ENA]
¢þ
>WENV180940221
ODTY01000682
[ODTY] human metagenome; G_DNA_Anterior nares
558
632
+
Ile2
CAT
[ENA]
¢þ
>WENV180940232
ODTY01001297
[ODTY] human metagenome; G_DNA_Anterior nares
582
508
-
Leu
CAA
[ENA]
¢þ
>WENV180940217
ODTY01000606
[ODTY] human metagenome; G_DNA_Anterior nares
636
707
+
Cys
GCA
[ENA]
¢þ
>WENV180940225
ODTY01000699
[ODTY] human metagenome; G_DNA_Anterior nares
638
564
-
Asp
GTC
[ENA]
¢þ
>WENV180940208
ODTY01000310
[ODTY] human metagenome; G_DNA_Anterior nares
648
576
-
Gly
TCC
[ENA]
¢þ
>WENV180940218
ODTY01000606
[ODTY] human metagenome; G_DNA_Anterior nares
725
799
+
Val
GAC
[ENA]
¢þ
>WENV180940229
ODTY01000825
[ODTY] human metagenome; G_DNA_Anterior nares
740
815
+
Thr
TGT
[ENA]
¢þ
>WENV180940207
ODTY01000310
[ODTY] human metagenome; G_DNA_Anterior nares
790
866
+
Pro
TGG
[ENA]
¢þ
>WENV180940201
ODTY01000189
[ODTY] human metagenome; G_DNA_Anterior nares
805
889
+
Leu
CAA
[ENA]
¢þ
>WENV180940211
ODTY01000357
[ODTY] human metagenome; G_DNA_Anterior nares
842
914
+
Gln
CTG
[ENA]
¢þ
>WENV180940215
ODTY01000432
[ODTY] human metagenome; G_DNA_Anterior nares
991
918
-
Ala
TGC
[ENA]
¢þ
>WENV180940212
ODTY01000357
[ODTY] human metagenome; G_DNA_Anterior nares
1050
1125
+
Glu
CTC
[ENA]
¢þ
>WENV180940214
ODTY01000432
[ODTY] human metagenome; G_DNA_Anterior nares
1094
1018
-
Ile
GAT
[ENA]
¢þ
>WENV180940223
ODTY01000691
[ODTY] human metagenome; G_DNA_Anterior nares
1110
1038
-
Val
GAC
[ENA]
¢þ
>WENV180940196
ODTY01000050
[ODTY] human metagenome; G_DNA_Anterior nares
1134
1207
+
Arg
CCT
[ENA]
¢þ
>WENV180940224
ODTY01000699
[ODTY] human metagenome; G_DNA_Anterior nares
1135
1061
-
Glu
TTC
[ENA]
¢þ
>WENV180940222
ODTY01000691
[ODTY] human metagenome; G_DNA_Anterior nares
1182
1111
-
Cys
GCA
[ENA]
¢þ
>WENV180940195
ODTY01000044
[ODTY] human metagenome; G_DNA_Anterior nares
1363
1276
-
Ser
CGA
[ENA]
¢þ
>WENV180940209
ODTY01000315
[ODTY] human metagenome; G_DNA_Anterior nares
1463
1390
-
Gly
TCC
[ENA]
¢þ
>WENV180940210
ODTY01000329
[ODTY] human metagenome; G_DNA_Anterior nares
1619
1693
+
Lys
CTT
[ENA]
¢þ
>WENV180940200
ODTY01000187
[ODTY] human metagenome; G_DNA_Anterior nares
1626
1711
+
Ser
TGA
[ENA]
¢þ
>WENV180940198
ODTY01000152
[ODTY] human metagenome; G_DNA_Anterior nares
2113
2038
-
Thr
TGT
[ENA]
¢þ
>WENV180940194
ODTY01000003
[ODTY] human metagenome; G_DNA_Anterior nares
2916
2990
+
Val
TAC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK