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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[ODVI] human metagenome; G_DNA_Anterior nares
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180984681
ODVI01001226
[ODVI] human metagenome; G_DNA_Anterior nares
1
82
+
Leu
TAG
[ENA]
¢þ
>WENV180984705
ODVI01004545
[ODVI] human metagenome; G_DNA_Anterior nares
18
90
+
Gln
CTG
[ENA]
¢þ
>WENV180984695
ODVI01002866
[ODVI] human metagenome; G_DNA_Anterior nares
85
173
+
Ser
GCT
[ENA]
¢þ
>WENV180984682
ODVI01001226
[ODVI] human metagenome; G_DNA_Anterior nares
89
161
+
Thr
TGT
[ENA]
¢þ
>WENV180984709
ODVI01006184
[ODVI] human metagenome; G_DNA_Anterior nares
92
20
-
Lys
TTT
[ENA]
¢þ
>WENV180984651
ODVI01000010
[ODVI] human metagenome; G_DNA_Anterior nares
92
167
+
Gln
TTG
[ENA]
¢þ
>WENV180984702
ODVI01003962
[ODVI] human metagenome; G_DNA_Anterior nares
100
12
-
Ser
GGA
[ENA]
¢þ
>WENV180984688
ODVI01001717
[ODVI] human metagenome; G_DNA_Anterior nares
103
178
+
Asp
GTC
[ENA]
¢þ
>WENV180984703
ODVI01004281
[ODVI] human metagenome; G_DNA_Anterior nares
104
33
-
Trp
CCA
[ENA]
¢þ
>WENV180984673
ODVI01000714
[ODVI] human metagenome; G_DNA_Anterior nares
109
36
-
Lys
CTT
[ENA]
¢þ
>WENV180984694
ODVI01002719
[ODVI] human metagenome; G_DNA_Anterior nares
122
47
-
Val
TAC
[ENA]
¢þ
>WENV180984710
ODVI01006965
[ODVI] human metagenome; G_DNA_Anterior nares
127
202
+
Thr
GGT
[ENA]
¢þ
>WENV180984706
ODVI01004545
[ODVI] human metagenome; G_DNA_Anterior nares
128
201
+
Glu
CTC
[ENA]
¢þ
>WENV180984701
ODVI01003689
[ODVI] human metagenome; G_DNA_Anterior nares
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180984679
ODVI01000832
[ODVI] human metagenome; G_DNA_Anterior nares
141
68
-
Gln
TTG
[ENA]
¢þ
>WENV180984707
ODVI01005795
[ODVI] human metagenome; G_DNA_Anterior nares
149
75
-
Pro
TGG
[ENA]
¢þ
>WENV180984692
ODVI01002627
[ODVI] human metagenome; G_DNA_Anterior nares
161
237
+
Ile
GAT
[ENA]
¢þ
>WENV180984704
ODVI01004446
[ODVI] human metagenome; G_DNA_Anterior nares
162
236
+
Leu
TAA
[ENA]
¢þ
>WENV180984708
ODVI01006184
[ODVI] human metagenome; G_DNA_Anterior nares
174
102
-
Val
TAC
[ENA]
¢þ
>WENV180984683
ODVI01001226
[ODVI] human metagenome; G_DNA_Anterior nares
177
248
+
Gly
GCC
[ENA]
¢þ
>WENV180984699
ODVI01003509
[ODVI] human metagenome; G_DNA_Anterior nares
183
95
-
Ser
GGA
[ENA]
¢þ
>WENV180984689
ODVI01001717
[ODVI] human metagenome; G_DNA_Anterior nares
184
258
+
Phe
GAA
[ENA]
¢þ
>WENV180984697
ODVI01003175
[ODVI] human metagenome; G_DNA_Anterior nares
191
117
-
Val
CAC
[ENA]
¢þ
>WENV180984696
ODVI01003151
[ODVI] human metagenome; G_DNA_Anterior nares
225
298
+
Thr
TGT
[ENA]
¢þ
>WENV180984678
ODVI01000832
[ODVI] human metagenome; G_DNA_Anterior nares
228
145
-
Tyr
GTA
[ENA]
¢þ
>WENV180984700
ODVI01003689
[ODVI] human metagenome; G_DNA_Anterior nares
235
160
-
Gly
GCC
[ENA]
¢þ
>WENV180984698
ODVI01003387
[ODVI] human metagenome; G_DNA_Anterior nares
242
169
-
Met
CAT
[ENA]
¢þ
>WENV180984693
ODVI01002627
[ODVI] human metagenome; G_DNA_Anterior nares
247
320
+
Ala
TGC
[ENA]
¢þ
>WENV180984684
ODVI01001226
[ODVI] human metagenome; G_DNA_Anterior nares
277
363
+
Leu
TAA
[ENA]
¢þ
>WENV180984691
ODVI01002501
[ODVI] human metagenome; G_DNA_Anterior nares
284
366
+
Tyr
GTA
[ENA]
¢þ
>WENV180984690
ODVI01002429
[ODVI] human metagenome; G_DNA_Anterior nares
288
215
-
Arg
ACG
[ENA]
¢þ
>WENV180984677
ODVI01000832
[ODVI] human metagenome; G_DNA_Anterior nares
304
233
-
Glu
TTC
[ENA]
¢þ
>WENV180984687
ODVI01001552
[ODVI] human metagenome; G_DNA_Anterior nares
324
238
-
Leu
GAG
[ENA]
¢þ
>WENV180984685
ODVI01001226
[ODVI] human metagenome; G_DNA_Anterior nares
372
447
+
Arg
ACG
[ENA]
¢þ
>WENV180984686
ODVI01001528
[ODVI] human metagenome; G_DNA_Anterior nares
376
300
-
fMet
CAT
[ENA]
¢þ
>WENV180984680
ODVI01000992
[ODVI] human metagenome; G_DNA_Anterior nares
377
280
-
SeC
TCA
[ENA]
¢þ
>WENV180984676
ODVI01000832
[ODVI] human metagenome; G_DNA_Anterior nares
395
320
-
Ile
GAT
[ENA]
¢þ
>WENV180984668
ODVI01000053
[ODVI] human metagenome; G_DNA_Anterior nares
472
547
+
Lys
TTT
[ENA]
¢þ
>WENV180984675
ODVI01000832
[ODVI] human metagenome; G_DNA_Anterior nares
475
405
-
Gly
TCC
[ENA]
¢þ
>WENV180984652
ODVI01000010
[ODVI] human metagenome; G_DNA_Anterior nares
497
572
+
Gln
TTG
[ENA]
¢þ
>WENV180984669
ODVI01000053
[ODVI] human metagenome; G_DNA_Anterior nares
584
659
+
Lys
TTT
[ENA]
¢þ
>WENV180984674
ODVI01000832
[ODVI] human metagenome; G_DNA_Anterior nares
601
528
-
Ile2
CAT
[ENA]
¢þ
>WENV180984672
ODVI01000330
[ODVI] human metagenome; G_DNA_Anterior nares
683
600
-
Leu
GAG
[ENA]
¢þ
>WENV180984670
ODVI01000053
[ODVI] human metagenome; G_DNA_Anterior nares
696
771
+
Lys
TTT
[ENA]
¢þ
>WENV180984671
ODVI01000053
[ODVI] human metagenome; G_DNA_Anterior nares
773
848
+
Asn
GTT
[ENA]
¢þ
>WENV180984667
ODVI01000040
[ODVI] human metagenome; G_DNA_Anterior nares
1384
1310
-
Asn
GTT
[ENA]
¢þ
>WENV180984664
ODVI01000030
[ODVI] human metagenome; G_DNA_Anterior nares
1590
1675
+
Leu
CAA
[ENA]
¢þ
>WENV180984666
ODVI01000039
[ODVI] human metagenome; G_DNA_Anterior nares
3949
4024
+
Gly
GCC
[ENA]
¢þ
>WENV180984665
ODVI01000031
[ODVI] human metagenome; G_DNA_Anterior nares
4365
4440
+
Phe
GAA
[ENA]
¢þ
>WENV180984640
ODVI01000005
[ODVI] human metagenome; G_DNA_Anterior nares
5647
5723
+
fMet
CAT
[ENA]
¢þ
>WENV180984657
ODVI01000011
[ODVI] human metagenome; G_DNA_Anterior nares
8242
8317
+
Asn
GTT
[ENA]
¢þ
>WENV180984663
ODVI01000022
[ODVI] human metagenome; G_DNA_Anterior nares
16160
16084
-
Pro
GGG
[ENA]
¢þ
>WENV180984662
ODVI01000018
[ODVI] human metagenome; G_DNA_Anterior nares
21923
21839
-
Leu
TAG
[ENA]
¢þ
>WENV180984661
ODVI01000016
[ODVI] human metagenome; G_DNA_Anterior nares
27369
27293
-
Ile2
CAT
[ENA]
¢þ
>WENV180984656
ODVI01000010
[ODVI] human metagenome; G_DNA_Anterior nares
30011
29936
-
Glu
TTC
[ENA]
¢þ
>WENV180984655
ODVI01000010
[ODVI] human metagenome; G_DNA_Anterior nares
30165
30090
-
Ala
GGC
[ENA]
¢þ
>WENV180984637
ODVI01000002
[ODVI] human metagenome; G_DNA_Anterior nares
30706
30631
-
Glu
TTC
[ENA]
¢þ
>WENV180984649
ODVI01000008
[ODVI] human metagenome; G_DNA_Anterior nares
32007
32091
+
Leu
GAG
[ENA]
¢þ
>WENV180984636
ODVI01000002
[ODVI] human metagenome; G_DNA_Anterior nares
34820
34745
-
His
GTG
[ENA]
¢þ
>WENV180984635
ODVI01000002
[ODVI] human metagenome; G_DNA_Anterior nares
34930
34854
-
Arg
TCT
[ENA]
¢þ
>WENV180984634
ODVI01000002
[ODVI] human metagenome; G_DNA_Anterior nares
35050
34974
-
Pro
TGG
[ENA]
¢þ
>WENV180984633
ODVI01000002
[ODVI] human metagenome; G_DNA_Anterior nares
40662
40586
-
Val
GAC
[ENA]
¢þ
>WENV180984660
ODVI01000015
[ODVI] human metagenome; G_DNA_Anterior nares
41025
40949
-
Arg
CCG
[ENA]
¢þ
>WENV180984648
ODVI01000006
[ODVI] human metagenome; G_DNA_Anterior nares
44347
44261
-
Leu
TAA
[ENA]
¢þ
>WENV180984647
ODVI01000006
[ODVI] human metagenome; G_DNA_Anterior nares
44443
44370
-
Cys
GCA
[ENA]
¢þ
>WENV180984659
ODVI01000015
[ODVI] human metagenome; G_DNA_Anterior nares
55220
55130
-
Ser
GGA
[ENA]
¢þ
>WENV180984658
ODVI01000015
[ODVI] human metagenome; G_DNA_Anterior nares
59684
59774
+
Ser
TGA
[ENA]
¢þ
>WENV180984638
ODVI01000003
[ODVI] human metagenome; G_DNA_Anterior nares
69875
69964
+
Ser
GCT
[ENA]
¢þ
>WENV180984639
ODVI01000003
[ODVI] human metagenome; G_DNA_Anterior nares
70098
70174
+
Arg
ACG
[ENA]
¢þ
>WENV180984641
ODVI01000005
[ODVI] human metagenome; G_DNA_Anterior nares
75369
75444
+
Thr
TGT
[ENA]
¢þ
>WENV180984642
ODVI01000005
[ODVI] human metagenome; G_DNA_Anterior nares
75527
75610
+
Tyr
GTA
[ENA]
¢þ
>WENV180984643
ODVI01000005
[ODVI] human metagenome; G_DNA_Anterior nares
75633
75706
+
Gly
TCC
[ENA]
¢þ
>WENV180984644
ODVI01000005
[ODVI] human metagenome; G_DNA_Anterior nares
75725
75799
+
Thr
GGT
[ENA]
¢þ
>WENV180984650
ODVI01000009
[ODVI] human metagenome; G_DNA_Anterior nares
88670
88745
+
Trp
CCA
[ENA]
¢þ
>WENV180984646
ODVI01000006
[ODVI] human metagenome; G_DNA_Anterior nares
91231
91147
-
Leu
TAG
[ENA]
¢þ
>WENV180984654
ODVI01000010
[ODVI] human metagenome; G_DNA_Anterior nares
96820
96745
-
Ala
TGC
[ENA]
¢þ
>WENV180984653
ODVI01000010
[ODVI] human metagenome; G_DNA_Anterior nares
96901
96825
-
Ile
GAT
[ENA]
¢þ
>WENV180984645
ODVI01000005
[ODVI] human metagenome; G_DNA_Anterior nares
122274
122350
+
Met
CAT
[ENA]
¢þ
>WENV180984629
ODVI01000001
[ODVI] human metagenome; G_DNA_Anterior nares
148246
148321
+
Val
TAC
[ENA]
¢þ
>WENV180984630
ODVI01000001
[ODVI] human metagenome; G_DNA_Anterior nares
148363
148439
+
Asp
GTC
[ENA]
¢þ
>WENV180984631
ODVI01000002
[ODVI] human metagenome; G_DNA_Anterior nares
166372
166447
+
Val
TAC
[ENA]
¢þ
>WENV180984632
ODVI01000002
[ODVI] human metagenome; G_DNA_Anterior nares
166489
166565
+
Asp
GTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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