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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ODWL] human metagenome; G_DNA_Anterior nares
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181012991
ODWL01006715
[ODWL] human metagenome; G_DNA_Anterior nares
4
75
+
Cys
GCA
[ENA]
¢þ
>WENV181012962
ODWL01001600
[ODWL] human metagenome; G_DNA_Anterior nares
5
80
+
Asp
GTC
[ENA]
¢þ
>WENV181012986
ODWL01005258
[ODWL] human metagenome; G_DNA_Anterior nares
8
83
+
Thr
TGT
[ENA]
¢þ
>WENV181012999
ODWL01009954
[ODWL] human metagenome; G_DNA_Anterior nares
23
98
+
Thr
TGT
[ENA]
¢þ
>WENV181012996
ODWL01007155
[ODWL] human metagenome; G_DNA_Anterior nares
54
127
+
His
GTG
[ENA]
¢þ
>WENV181013005
ODWL01015003
[ODWL] human metagenome; G_DNA_Anterior nares
70
160
+
Ser
GGA
[ENA]
¢þ
>WENV181012929
ODWL01000393
[ODWL] human metagenome; G_DNA_Anterior nares
72
147
+
Phe
GAA
[ENA]
¢þ
>WENV181013006
ODWL01015461
[ODWL] human metagenome; G_DNA_Anterior nares
75
167
+
Ser
TGA
[ENA]
¢þ
>WENV181012976
ODWL01003319
[ODWL] human metagenome; G_DNA_Anterior nares
79
5
-
Asp
GTC
[ENA]
¢þ
>WENV181012985
ODWL01005087
[ODWL] human metagenome; G_DNA_Anterior nares
81
7
-
Lys
CTT
[ENA]
¢þ
>WENV181013002
ODWL01012000
[ODWL] human metagenome; G_DNA_Anterior nares
82
8
-
Glu
TTC
[ENA]
¢þ
>WENV181012998
ODWL01008513
[ODWL] human metagenome; G_DNA_Anterior nares
85
12
-
Arg
ACG
[ENA]
¢þ
>WENV181012959
ODWL01001483
[ODWL] human metagenome; G_DNA_Anterior nares
86
13
-
Thr
GGT
[ENA]
¢þ
>WENV181012945
ODWL01000756
[ODWL] human metagenome; G_DNA_Anterior nares
99
170
+
Gln
TTG
[ENA]
¢þ
>WENV181012992
ODWL01006715
[ODWL] human metagenome; G_DNA_Anterior nares
102
174
+
Val
GAC
[ENA]
¢þ
>WENV181012967
ODWL01001768
[ODWL] human metagenome; G_DNA_Anterior nares
103
189
+
Ser
TGA
[ENA]
¢þ
>WENV181013000
ODWL01009954
[ODWL] human metagenome; G_DNA_Anterior nares
104
178
+
Lys
TTT
[ENA]
¢þ
>WENV181012981
ODWL01004176
[ODWL] human metagenome; G_DNA_Anterior nares
114
190
+
fMet
CAT
[ENA]
¢þ
>WENV181012961
ODWL01001563
[ODWL] human metagenome; G_DNA_Anterior nares
128
55
-
Ala
TGC
[ENA]
¢þ
>WENV181012956
ODWL01001398
[ODWL] human metagenome; G_DNA_Anterior nares
135
208
+
Asn
GTT
[ENA]
¢þ
>WENV181012965
ODWL01001606
[ODWL] human metagenome; G_DNA_Anterior nares
145
72
-
Trp
CCA
[ENA]
¢þ
>WENV181013003
ODWL01012426
[ODWL] human metagenome; G_DNA_Anterior nares
151
225
+
Arg
CCG
[ENA]
¢þ
>WENV181012987
ODWL01005932
[ODWL] human metagenome; G_DNA_Anterior nares
161
237
+
Ile
GAT
[ENA]
¢þ
>WENV181012974
ODWL01002921
[ODWL] human metagenome; G_DNA_Anterior nares
163
88
-
Arg
CCG
[ENA]
¢þ
>WENV181012980
ODWL01004015
[ODWL] human metagenome; G_DNA_Anterior nares
177
249
+
Gln
CTG
[ENA]
¢þ
>WENV181013004
ODWL01014688
[ODWL] human metagenome; G_DNA_Anterior nares
178
104
-
Glu
TTC
[ENA]
¢þ
>WENV181012997
ODWL01007381
[ODWL] human metagenome; G_DNA_Anterior nares
178
105
-
His
GTG
[ENA]
¢þ
>WENV181013001
ODWL01010218
[ODWL] human metagenome; G_DNA_Anterior nares
178
250
+
Gln
TTG
[ENA]
¢þ
>WENV181012971
ODWL01002601
[ODWL] human metagenome; G_DNA_Anterior nares
181
254
+
Thr
TGT
[ENA]
¢þ
>WENV181012952
ODWL01000854
[ODWL] human metagenome; G_DNA_Anterior nares
199
115
-
Leu
CAA
[ENA]
¢þ
>WENV181012983
ODWL01005025
[ODWL] human metagenome; G_DNA_Anterior nares
200
127
-
Lys
TTT
[ENA]
¢þ
>WENV181012994
ODWL01006820
[ODWL] human metagenome; G_DNA_Anterior nares
200
274
+
Ile2
CAT
[ENA]
¢þ
>WENV181012990
ODWL01006491
[ODWL] human metagenome; G_DNA_Anterior nares
205
133
-
Gly
TCC
[ENA]
¢þ
>WENV181012984
ODWL01005037
[ODWL] human metagenome; G_DNA_Anterior nares
209
283
+
Gly
TCC
[ENA]
¢þ
>WENV181012993
ODWL01006715
[ODWL] human metagenome; G_DNA_Anterior nares
218
293
+
Gly
GCC
[ENA]
¢þ
>WENV181012947
ODWL01000765
[ODWL] human metagenome; G_DNA_Anterior nares
229
303
+
Ala
TGC
[ENA]
¢þ
>WENV181012960
ODWL01001563
[ODWL] human metagenome; G_DNA_Anterior nares
231
155
-
Ile
GAT
[ENA]
¢þ
>WENV181012995
ODWL01006858
[ODWL] human metagenome; G_DNA_Anterior nares
238
311
+
Leu
TAA
[ENA]
¢þ
>WENV181012982
ODWL01004690
[ODWL] human metagenome; G_DNA_Anterior nares
244
326
+
Leu
TAG
[ENA]
¢þ
>WENV181012988
ODWL01005932
[ODWL] human metagenome; G_DNA_Anterior nares
247
320
+
Ala
TGC
[ENA]
¢þ
>WENV181012955
ODWL01001338
[ODWL] human metagenome; G_DNA_Anterior nares
255
185
-
Val
TAC
[ENA]
¢þ
>WENV181012989
ODWL01006281
[ODWL] human metagenome; G_DNA_Anterior nares
263
189
-
Leu
TAA
[ENA]
¢þ
>WENV181012979
ODWL01003906
[ODWL] human metagenome; G_DNA_Anterior nares
276
348
+
Gln
TTG
[ENA]
¢þ
>WENV181012939
ODWL01000643
[ODWL] human metagenome; G_DNA_Anterior nares
299
224
-
Arg
TCG
[ENA]
¢þ
>WENV181012969
ODWL01002193
[ODWL] human metagenome; G_DNA_Anterior nares
313
231
-
Tyr
GTA
[ENA]
¢þ
>WENV181012978
ODWL01003838
[ODWL] human metagenome; G_DNA_Anterior nares
331
240
-
Glu
CTC
[ENA]
¢þ
>WENV181012930
ODWL01000441
[ODWL] human metagenome; G_DNA_Anterior nares
339
412
+
Gly
CCC
[ENA]
¢þ
>WENV181012970
ODWL01002437
[ODWL] human metagenome; G_DNA_Anterior nares
340
267
-
Ala
GGC
[ENA]
¢þ
>WENV181012964
ODWL01001606
[ODWL] human metagenome; G_DNA_Anterior nares
356
283
-
Met
CAT
[ENA]
¢þ
>WENV181012973
ODWL01002703
[ODWL] human metagenome; G_DNA_Anterior nares
357
443
+
Leu
GAG
[ENA]
¢þ
>WENV181012975
ODWL01003163
[ODWL] human metagenome; G_DNA_Anterior nares
366
441
+
Glu
TTC
[ENA]
¢þ
>WENV181012958
ODWL01001483
[ODWL] human metagenome; G_DNA_Anterior nares
369
287
-
Tyr
GTA
[ENA]
¢þ
>WENV181012977
ODWL01003596
[ODWL] human metagenome; G_DNA_Anterior nares
371
443
+
Arg
TCT
[ENA]
¢þ
>WENV181012940
ODWL01000688
[ODWL] human metagenome; G_DNA_Anterior nares
378
305
-
Gly
TCC
[ENA]
¢þ
>WENV181012926
ODWL01000359
[ODWL] human metagenome; G_DNA_Anterior nares
395
470
+
Thr
CGT
[ENA]
¢þ
>WENV181012948
ODWL01000765
[ODWL] human metagenome; G_DNA_Anterior nares
395
477
+
Tyr
GTA
[ENA]
¢þ
>WENV181012923
ODWL01000159
[ODWL] human metagenome; G_DNA_Anterior nares
417
344
-
Asn
GTT
[ENA]
¢þ
>WENV181012920
ODWL01000047
[ODWL] human metagenome; G_DNA_Anterior nares
453
370
-
Leu
TAG
[ENA]
¢þ
>WENV181012963
ODWL01001606
[ODWL] human metagenome; G_DNA_Anterior nares
469
394
-
Thr
GGT
[ENA]
¢þ
>WENV181012936
ODWL01000542
[ODWL] human metagenome; G_DNA_Anterior nares
475
392
-
Leu
CAG
[ENA]
¢þ
>WENV181012972
ODWL01002684
[ODWL] human metagenome; G_DNA_Anterior nares
500
426
-
fMet
CAT
[ENA]
¢þ
>WENV181012966
ODWL01001729
[ODWL] human metagenome; G_DNA_Anterior nares
509
596
+
Leu
CAG
[ENA]
¢þ
>WENV181012934
ODWL01000510
[ODWL] human metagenome; G_DNA_Anterior nares
514
441
-
Val
CAC
[ENA]
¢þ
>WENV181012968
ODWL01001820
[ODWL] human metagenome; G_DNA_Anterior nares
514
588
+
Lys
TTT
[ENA]
¢þ
>WENV181012949
ODWL01000765
[ODWL] human metagenome; G_DNA_Anterior nares
516
600
+
Ser
TGA
[ENA]
¢þ
>WENV181012953
ODWL01000885
[ODWL] human metagenome; G_DNA_Anterior nares
534
464
-
Met
CAT
[ENA]
¢þ
>WENV181012928
ODWL01000384
[ODWL] human metagenome; G_DNA_Anterior nares
599
525
-
Ala
TGC
[ENA]
¢þ
>WENV181012946
ODWL01000756
[ODWL] human metagenome; G_DNA_Anterior nares
619
544
-
Lys
TTT
[ENA]
¢þ
>WENV181012957
ODWL01001465
[ODWL] human metagenome; G_DNA_Anterior nares
656
581
-
Trp
CCA
[ENA]
¢þ
>WENV181012938
ODWL01000643
[ODWL] human metagenome; G_DNA_Anterior nares
665
581
-
Leu
TAG
[ENA]
¢þ
>WENV181012951
ODWL01000815
[ODWL] human metagenome; G_DNA_Anterior nares
730
806
+
Pro
CGG
[ENA]
¢þ
>WENV181012954
ODWL01001255
[ODWL] human metagenome; G_DNA_Anterior nares
770
844
+
Ile2
CAT
[ENA]
¢þ
>WENV181012931
ODWL01000510
[ODWL] human metagenome; G_DNA_Anterior nares
893
966
+
Gly
GCC
[ENA]
¢þ
>WENV181012950
ODWL01000776
[ODWL] human metagenome; G_DNA_Anterior nares
938
1010
+
Arg
CCG
[ENA]
¢þ
>WENV181012927
ODWL01000380
[ODWL] human metagenome; G_DNA_Anterior nares
967
893
-
Val
TAC
[ENA]
¢þ
>WENV181012932
ODWL01000510
[ODWL] human metagenome; G_DNA_Anterior nares
994
1065
+
Cys
GCA
[ENA]
¢þ
>WENV181012941
ODWL01000697
[ODWL] human metagenome; G_DNA_Anterior nares
1029
1101
+
Gln
CTG
[ENA]
¢þ
>WENV181012933
ODWL01000510
[ODWL] human metagenome; G_DNA_Anterior nares
1066
1138
+
Val
GAC
[ENA]
¢þ
>WENV181012937
ODWL01000549
[ODWL] human metagenome; G_DNA_Anterior nares
1072
998
-
Asn
GTT
[ENA]
¢þ
>WENV181012943
ODWL01000750
[ODWL] human metagenome; G_DNA_Anterior nares
1086
1001
-
Ser
GGA
[ENA]
¢þ
>WENV181012944
ODWL01000753
[ODWL] human metagenome; G_DNA_Anterior nares
1087
1162
+
Thr
TGT
[ENA]
¢þ
>WENV181012942
ODWL01000723
[ODWL] human metagenome; G_DNA_Anterior nares
1151
1238
+
Ser
CGA
[ENA]
¢þ
>WENV181012935
ODWL01000521
[ODWL] human metagenome; G_DNA_Anterior nares
1301
1380
+
Gln
TTG
[ENA]
¢þ
>WENV181012924
ODWL01000175
[ODWL] human metagenome; G_DNA_Anterior nares
1547
1620
+
Ala
CGC
[ENA]
¢þ
>WENV181012916
ODWL01000001
[ODWL] human metagenome; G_DNA_Anterior nares
2064
1990
-
Ile
GAT
[ENA]
¢þ
>WENV181012919
ODWL01000041
[ODWL] human metagenome; G_DNA_Anterior nares
2261
2187
-
Pro
GGG
[ENA]
¢þ
>WENV181012925
ODWL01000180
[ODWL] human metagenome; G_DNA_Anterior nares
2271
2344
+
Asp
GTC
[ENA]
¢þ
>WENV181012922
ODWL01000099
[ODWL] human metagenome; G_DNA_Anterior nares
2365
2450
+
Ser
TGA
[ENA]
¢þ
>WENV181012921
ODWL01000092
[ODWL] human metagenome; G_DNA_Anterior nares
2764
2691
-
Arg
CCT
[ENA]
¢þ
>WENV181012918
ODWL01000017
[ODWL] human metagenome; G_DNA_Anterior nares
3893
3818
-
His
GTG
[ENA]
¢þ
>WENV181012917
ODWL01000005
[ODWL] human metagenome; G_DNA_Anterior nares
3942
4015
+
Trp
CCA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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