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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[ODXY] human metagenome; G_DNA_Tongue dorsum
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181047065
ODXY01006125
[ODXY] human metagenome; G_DNA_Tongue dorsum
31
104
+
Val
CAC
[ENA]
¢þ
>WENV181047075
ODXY01009834
[ODXY] human metagenome; G_DNA_Tongue dorsum
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV181047057
ODXY01002415
[ODXY] human metagenome; G_DNA_Tongue dorsum
36
108
+
Val
GAC
[ENA]
¢þ
>WENV181047067
ODXY01006723
[ODXY] human metagenome; G_DNA_Tongue dorsum
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV181047042
ODXY01001199
[ODXY] human metagenome; G_DNA_Tongue dorsum
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV181047052
ODXY01001582
[ODXY] human metagenome; G_DNA_Tongue dorsum
81
7
-
Val
TAC
[ENA]
¢þ
>WENV181047072
ODXY01008646
[ODXY] human metagenome; G_DNA_Tongue dorsum
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV181047074
ODXY01009597
[ODXY] human metagenome; G_DNA_Tongue dorsum
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV181047060
ODXY01002634
[ODXY] human metagenome; G_DNA_Tongue dorsum
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV181047071
ODXY01008183
[ODXY] human metagenome; G_DNA_Tongue dorsum
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV181047076
ODXY01009834
[ODXY] human metagenome; G_DNA_Tongue dorsum
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV181047038
ODXY01000726
[ODXY] human metagenome; G_DNA_Tongue dorsum
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV181047068
ODXY01006723
[ODXY] human metagenome; G_DNA_Tongue dorsum
122
197
+
Val
TAC
[ENA]
¢þ
>WENV181047047
ODXY01001346
[ODXY] human metagenome; G_DNA_Tongue dorsum
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV181047015
ODXY01000023
[ODXY] human metagenome; G_DNA_Tongue dorsum
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV181047069
ODXY01007775
[ODXY] human metagenome; G_DNA_Tongue dorsum
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV181047073
ODXY01008728
[ODXY] human metagenome; G_DNA_Tongue dorsum
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV181047054
ODXY01001721
[ODXY] human metagenome; G_DNA_Tongue dorsum
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV181047059
ODXY01002602
[ODXY] human metagenome; G_DNA_Tongue dorsum
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV181047066
ODXY01006503
[ODXY] human metagenome; G_DNA_Tongue dorsum
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV181047030
ODXY01000429
[ODXY] human metagenome; G_DNA_Tongue dorsum
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV181047070
ODXY01008183
[ODXY] human metagenome; G_DNA_Tongue dorsum
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV181047040
ODXY01001032
[ODXY] human metagenome; G_DNA_Tongue dorsum
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV181047064
ODXY01003947
[ODXY] human metagenome; G_DNA_Tongue dorsum
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV181047046
ODXY01001346
[ODXY] human metagenome; G_DNA_Tongue dorsum
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV181047062
ODXY01003389
[ODXY] human metagenome; G_DNA_Tongue dorsum
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV181047063
ODXY01003907
[ODXY] human metagenome; G_DNA_Tongue dorsum
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV181047049
ODXY01001403
[ODXY] human metagenome; G_DNA_Tongue dorsum
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV181047050
ODXY01001408
[ODXY] human metagenome; G_DNA_Tongue dorsum
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV181047037
ODXY01000726
[ODXY] human metagenome; G_DNA_Tongue dorsum
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV181047058
ODXY01002487
[ODXY] human metagenome; G_DNA_Tongue dorsum
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV181047061
ODXY01002917
[ODXY] human metagenome; G_DNA_Tongue dorsum
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV181047036
ODXY01000693
[ODXY] human metagenome; G_DNA_Tongue dorsum
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV181047056
ODXY01001853
[ODXY] human metagenome; G_DNA_Tongue dorsum
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV181047043
ODXY01001199
[ODXY] human metagenome; G_DNA_Tongue dorsum
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV181047045
ODXY01001268
[ODXY] human metagenome; G_DNA_Tongue dorsum
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV181047020
ODXY01000061
[ODXY] human metagenome; G_DNA_Tongue dorsum
381
311
-
Met
CAT
[ENA]
¢þ
>WENV181047025
ODXY01000316
[ODXY] human metagenome; G_DNA_Tongue dorsum
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV181047055
ODXY01001853
[ODXY] human metagenome; G_DNA_Tongue dorsum
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV181047048
ODXY01001403
[ODXY] human metagenome; G_DNA_Tongue dorsum
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV181047039
ODXY01001011
[ODXY] human metagenome; G_DNA_Tongue dorsum
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV181047041
ODXY01001097
[ODXY] human metagenome; G_DNA_Tongue dorsum
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV181047053
ODXY01001663
[ODXY] human metagenome; G_DNA_Tongue dorsum
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV181047044
ODXY01001199
[ODXY] human metagenome; G_DNA_Tongue dorsum
496
570
+
Met
CAT
[ENA]
¢þ
>WENV181047026
ODXY01000316
[ODXY] human metagenome; G_DNA_Tongue dorsum
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV181047028
ODXY01000353
[ODXY] human metagenome; G_DNA_Tongue dorsum
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV181047051
ODXY01001520
[ODXY] human metagenome; G_DNA_Tongue dorsum
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV181047018
ODXY01000059
[ODXY] human metagenome; G_DNA_Tongue dorsum
548
618
+
Val
TAC
[ENA]
¢þ
>WENV181047035
ODXY01000587
[ODXY] human metagenome; G_DNA_Tongue dorsum
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV181047033
ODXY01000538
[ODXY] human metagenome; G_DNA_Tongue dorsum
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV181047032
ODXY01000494
[ODXY] human metagenome; G_DNA_Tongue dorsum
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV181047034
ODXY01000553
[ODXY] human metagenome; G_DNA_Tongue dorsum
815
890
+
His
GTG
[ENA]
¢þ
>WENV181047023
ODXY01000151
[ODXY] human metagenome; G_DNA_Tongue dorsum
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV181047031
ODXY01000482
[ODXY] human metagenome; G_DNA_Tongue dorsum
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV181047029
ODXY01000353
[ODXY] human metagenome; G_DNA_Tongue dorsum
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV181047027
ODXY01000318
[ODXY] human metagenome; G_DNA_Tongue dorsum
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV181047024
ODXY01000219
[ODXY] human metagenome; G_DNA_Tongue dorsum
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV181047019
ODXY01000061
[ODXY] human metagenome; G_DNA_Tongue dorsum
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV181047016
ODXY01000038
[ODXY] human metagenome; G_DNA_Tongue dorsum
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV181047022
ODXY01000143
[ODXY] human metagenome; G_DNA_Tongue dorsum
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV181047021
ODXY01000063
[ODXY] human metagenome; G_DNA_Tongue dorsum
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV181047017
ODXY01000038
[ODXY] human metagenome; G_DNA_Tongue dorsum
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK