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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OEAL] human gut metagenome; human gut
HIT:
131 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181071502
OEAL01027405
[OEAL] human gut metagenome; human gut
14
89
+
Ala
GGC
[ENA]
¢þ
>WENV181071509
OEAL01029010
[OEAL] human gut metagenome; human gut
18
91
+
Arg
CCT
[ENA]
¢þ
>WENV181071466
OEAL01015572
[OEAL] human gut metagenome; human gut
21
96
+
Lys
TTT
[ENA]
¢þ
>WENV181071498
OEAL01026578
[OEAL] human gut metagenome; human gut
23
97
+
Thr
GGT
[ENA]
¢þ
>WENV181071499
OEAL01026790
[OEAL] human gut metagenome; human gut
30
105
+
Thr
TGT
[ENA]
¢þ
>WENV181071476
OEAL01018046
[OEAL] human gut metagenome; human gut
31
107
+
Arg
TCT
[ENA]
¢þ
>WENV181071508
OEAL01028909
[OEAL] human gut metagenome; human gut
39
114
+
Lys
TTT
[ENA]
¢þ
>WENV181071501
OEAL01027351
[OEAL] human gut metagenome; human gut
40
116
+
Ala
GGC
[ENA]
¢þ
>WENV181071488
OEAL01021946
[OEAL] human gut metagenome; human gut
41
116
+
Thr
GGT
[ENA]
¢þ
>WENV181071483
OEAL01019231
[OEAL] human gut metagenome; human gut
42
112
+
Gly
TCC
[ENA]
¢þ
>WENV181071506
OEAL01028270
[OEAL] human gut metagenome; human gut
43
119
+
Pro
TGG
[ENA]
¢þ
>WENV181071492
OEAL01023422
[OEAL] human gut metagenome; human gut
44
130
+
Leu
CAG
[ENA]
¢þ
>WENV181071487
OEAL01021808
[OEAL] human gut metagenome; human gut
50
140
+
Ser
CGA
[ENA]
¢þ
>WENV181071481
OEAL01019067
[OEAL] human gut metagenome; human gut
53
126
+
Gly
CCC
[ENA]
¢þ
>WENV181071452
OEAL01012713
[OEAL] human gut metagenome; human gut
58
132
+
Lys
CTT
[ENA]
¢þ
>WENV181071514
OEAL01030811
[OEAL] human gut metagenome; human gut
60
135
+
Thr
GGT
[ENA]
¢þ
>WENV181071480
OEAL01018945
[OEAL] human gut metagenome; human gut
60
144
+
Tyr
GTA
[ENA]
¢þ
>WENV181071489
OEAL01021969
[OEAL] human gut metagenome; human gut
65
153
+
Ser
GGA
[ENA]
¢þ
>WENV181071475
OEAL01017826
[OEAL] human gut metagenome; human gut
66
142
+
Pro
GGG
[ENA]
¢þ
>WENV181071464
OEAL01015010
[OEAL] human gut metagenome; human gut
66
153
+
Ser
CGA
[ENA]
¢þ
>WENV181071511
OEAL01029535
[OEAL] human gut metagenome; human gut
72
144
+
Thr
TGT
[ENA]
¢þ
>WENV181071493
OEAL01024472
[OEAL] human gut metagenome; human gut
72
148
+
Val
GAC
[ENA]
¢þ
>WENV181071442
OEAL01007516
[OEAL] human gut metagenome; human gut
73
148
+
Thr
CGT
[ENA]
¢þ
>WENV181071438
OEAL01007039
[OEAL] human gut metagenome; human gut
73
148
+
Lys
TTT
[ENA]
¢þ
>WENV181071461
OEAL01014377
[OEAL] human gut metagenome; human gut
92
18
-
Thr
GGT
[ENA]
¢þ
>WENV181071479
OEAL01018348
[OEAL] human gut metagenome; human gut
93
17
-
Met
CAT
[ENA]
¢þ
>WENV181071513
OEAL01030569
[OEAL] human gut metagenome; human gut
96
171
+
Ala
CGC
[ENA]
¢þ
>WENV181071472
OEAL01016544
[OEAL] human gut metagenome; human gut
97
23
-
His
GTG
[ENA]
¢þ
>WENV181071474
OEAL01017295
[OEAL] human gut metagenome; human gut
98
171
+
Ala
TGC
[ENA]
¢þ
>WENV181071500
OEAL01027249
[OEAL] human gut metagenome; human gut
99
26
-
Lys
CTT
[ENA]
¢þ
>WENV181071467
OEAL01015572
[OEAL] human gut metagenome; human gut
100
188
+
Ser
TGA
[ENA]
¢þ
>WENV181071495
OEAL01025140
[OEAL] human gut metagenome; human gut
101
174
+
Gly
CCC
[ENA]
¢þ
>WENV181071471
OEAL01016480
[OEAL] human gut metagenome; human gut
102
16
-
Leu
CAG
[ENA]
¢þ
>WENV181071441
OEAL01007303
[OEAL] human gut metagenome; human gut
107
181
+
Thr
TGT
[ENA]
¢þ
>WENV181071497
OEAL01025994
[OEAL] human gut metagenome; human gut
110
35
-
Arg
CCT
[ENA]
¢þ
>WENV181071460
OEAL01014182
[OEAL] human gut metagenome; human gut
114
41
-
Lys
TTT
[ENA]
¢þ
>WENV181071504
OEAL01027848
[OEAL] human gut metagenome; human gut
115
39
-
Ile
GAT
[ENA]
¢þ
>WENV181071401
OEAL01001334
[OEAL] human gut metagenome; human gut
115
40
-
Ala
TGC
[ENA]
¢þ
>WENV181071428
OEAL01005076
[OEAL] human gut metagenome; human gut
116
40
-
Ile
GAT
[ENA]
¢þ
>WENV181071484
OEAL01019231
[OEAL] human gut metagenome; human gut
116
189
+
Gly
GCC
[ENA]
¢þ
>WENV181071477
OEAL01018046
[OEAL] human gut metagenome; human gut
116
191
+
Gln
TTG
[ENA]
¢þ
>WENV181071449
OEAL01012085
[OEAL] human gut metagenome; human gut
118
205
+
Ser
TGA
[ENA]
¢þ
>WENV181071416
OEAL01003194
[OEAL] human gut metagenome; human gut
119
195
+
Pro
TGG
[ENA]
¢þ
>WENV181071423
OEAL01004185
[OEAL] human gut metagenome; human gut
120
195
+
Val
GAC
[ENA]
¢þ
>WENV181071451
OEAL01012215
[OEAL] human gut metagenome; human gut
122
47
-
Thr
GGT
[ENA]
¢þ
>WENV181071507
OEAL01028270
[OEAL] human gut metagenome; human gut
127
202
+
Glu
TTC
[ENA]
¢þ
>WENV181071490
OEAL01022479
[OEAL] human gut metagenome; human gut
127
203
+
Ile2
CAT
[ENA]
¢þ
>WENV181071459
OEAL01013876
[OEAL] human gut metagenome; human gut
127
214
+
Ser
TGA
[ENA]
¢þ
>WENV181071446
OEAL01010822
[OEAL] human gut metagenome; human gut
129
53
-
Asp
GTC
[ENA]
¢þ
>WENV181071494
OEAL01025125
[OEAL] human gut metagenome; human gut
136
45
-
Ser
GGA
[ENA]
¢þ
>WENV181071473
OEAL01017010
[OEAL] human gut metagenome; human gut
140
64
-
Arg
TCT
[ENA]
¢þ
>WENV181071463
OEAL01014809
[OEAL] human gut metagenome; human gut
140
213
+
Gly
CCC
[ENA]
¢þ
>WENV181071486
OEAL01021546
[OEAL] human gut metagenome; human gut
140
214
+
Thr
CGT
[ENA]
¢þ
>WENV181071468
OEAL01015662
[OEAL] human gut metagenome; human gut
141
53
-
Ser
TGA
[ENA]
¢þ
>WENV181071444
OEAL01010115
[OEAL] human gut metagenome; human gut
145
70
-
Val
TAC
[ENA]
¢þ
>WENV181071413
OEAL01002474
[OEAL] human gut metagenome; human gut
145
70
-
Val
TAC
[ENA]
¢þ
>WENV181071432
OEAL01006110
[OEAL] human gut metagenome; human gut
148
75
-
Ile2
CAT
[ENA]
¢þ
>WENV181071505
OEAL01027862
[OEAL] human gut metagenome; human gut
149
75
-
Val
TAC
[ENA]
¢þ
>WENV181071424
OEAL01004447
[OEAL] human gut metagenome; human gut
150
75
-
Asp
GTC
[ENA]
¢þ
>WENV181071415
OEAL01002945
[OEAL] human gut metagenome; human gut
153
77
-
Ile
GAT
[ENA]
¢þ
>WENV181071426
OEAL01005033
[OEAL] human gut metagenome; human gut
154
78
-
Ile
GAT
[ENA]
¢þ
>WENV181071434
OEAL01006464
[OEAL] human gut metagenome; human gut
156
84
-
Gln
TTG
[ENA]
¢þ
>WENV181071458
OEAL01013721
[OEAL] human gut metagenome; human gut
156
232
+
Asp
GTC
[ENA]
¢þ
>WENV181071447
OEAL01011681
[OEAL] human gut metagenome; human gut
157
81
-
Pro
TGG
[ENA]
¢þ
>WENV181071405
OEAL01001816
[OEAL] human gut metagenome; human gut
157
233
+
Arg
ACG
[ENA]
¢þ
>WENV181071412
OEAL01002411
[OEAL] human gut metagenome; human gut
162
238
+
Arg
ACG
[ENA]
¢þ
>WENV181071482
OEAL01019077
[OEAL] human gut metagenome; human gut
163
87
-
Ile2
CAT
[ENA]
¢þ
>WENV181071398
OEAL01000663
[OEAL] human gut metagenome; human gut
164
88
-
Ile
GAT
[ENA]
¢þ
>WENV181071453
OEAL01012734
[OEAL] human gut metagenome; human gut
165
251
+
Leu
GAG
[ENA]
¢þ
>WENV181071478
OEAL01018348
[OEAL] human gut metagenome; human gut
170
95
-
Thr
GGT
[ENA]
¢þ
>WENV181071436
OEAL01006618
[OEAL] human gut metagenome; human gut
171
97
-
Thr
TGT
[ENA]
¢þ
>WENV181071512
OEAL01030128
[OEAL] human gut metagenome; human gut
176
87
-
Leu
TAA
[ENA]
¢þ
>WENV181071443
OEAL01007526
[OEAL] human gut metagenome; human gut
176
92
-
Leu
TAG
[ENA]
¢þ
>WENV181071485
OEAL01020320
[OEAL] human gut metagenome; human gut
178
103
-
Gly
GCC
[ENA]
¢þ
>WENV181071410
OEAL01002158
[OEAL] human gut metagenome; human gut
179
254
+
Arg
CCT
[ENA]
¢þ
>WENV181071454
OEAL01012953
[OEAL] human gut metagenome; human gut
183
110
-
Ala
TGC
[ENA]
¢þ
>WENV181071450
OEAL01012094
[OEAL] human gut metagenome; human gut
185
99
-
Leu
CAG
[ENA]
¢þ
>WENV181071440
OEAL01007190
[OEAL] human gut metagenome; human gut
186
111
-
Glu
TTC
[ENA]
¢þ
>WENV181071456
OEAL01013152
[OEAL] human gut metagenome; human gut
188
112
-
Arg
ACG
[ENA]
¢þ
>WENV181071510
OEAL01029071
[OEAL] human gut metagenome; human gut
188
114
-
Gln
CTG
[ENA]
¢þ
>WENV181071496
OEAL01025489
[OEAL] human gut metagenome; human gut
189
115
-
Leu
CAA
[ENA]
¢þ
>WENV181071503
OEAL01027600
[OEAL] human gut metagenome; human gut
195
107
-
Leu
TAA
[ENA]
¢þ
>WENV181071470
OEAL01016480
[OEAL] human gut metagenome; human gut
200
116
-
Tyr
GTA
[ENA]
¢þ
>WENV181071437
OEAL01006812
[OEAL] human gut metagenome; human gut
200
124
-
Arg
CCT
[ENA]
¢þ
>WENV181071491
OEAL01023228
[OEAL] human gut metagenome; human gut
200
125
-
Trp
CCA
[ENA]
¢þ
>WENV181071422
OEAL01004102
[OEAL] human gut metagenome; human gut
201
125
-
Arg
TCT
[ENA]
¢þ
>WENV181071448
OEAL01011972
[OEAL] human gut metagenome; human gut
201
127
-
Ala
TGC
[ENA]
¢þ
>WENV181071400
OEAL01001143
[OEAL] human gut metagenome; human gut
203
128
-
Lys
CTT
[ENA]
¢þ
>WENV181071418
OEAL01003440
[OEAL] human gut metagenome; human gut
204
130
-
Ala
TGC
[ENA]
¢þ
>WENV181071465
OEAL01015083
[OEAL] human gut metagenome; human gut
206
132
-
Glu
TTC
[ENA]
¢þ
>WENV181071469
OEAL01016299
[OEAL] human gut metagenome; human gut
209
135
-
Thr
TGT
[ENA]
¢þ
>WENV181071431
OEAL01005557
[OEAL] human gut metagenome; human gut
211
135
-
fMet
CAT
[ENA]
¢þ
>WENV181071427
OEAL01005076
[OEAL] human gut metagenome; human gut
211
136
-
Ala
TGC
[ENA]
¢þ
>WENV181071455
OEAL01013148
[OEAL] human gut metagenome; human gut
212
136
-
fMet
CAT
[ENA]
¢þ
>WENV181071439
OEAL01007039
[OEAL] human gut metagenome; human gut
212
286
+
Gln
TTG
[ENA]
¢þ
>WENV181071457
OEAL01013179
[OEAL] human gut metagenome; human gut
213
139
-
Asn
GTT
[ENA]
¢þ
>WENV181071462
OEAL01014791
[OEAL] human gut metagenome; human gut
214
141
-
Cys
GCA
[ENA]
¢þ
>WENV181071445
OEAL01010822
[OEAL] human gut metagenome; human gut
215
140
-
Val
TAC
[ENA]
¢þ
>WENV181071399
OEAL01000867
[OEAL] human gut metagenome; human gut
221
306
+
Tyr
GTA
[ENA]
¢þ
>WENV181071425
OEAL01005033
[OEAL] human gut metagenome; human gut
233
158
-
Ala
TGC
[ENA]
¢þ
>WENV181071397
OEAL01000663
[OEAL] human gut metagenome; human gut
243
168
-
Ala
TGC
[ENA]
¢þ
>WENV181071435
OEAL01006618
[OEAL] human gut metagenome; human gut
251
176
-
Asn
GTT
[ENA]
¢þ
>WENV181071433
OEAL01006464
[OEAL] human gut metagenome; human gut
272
198
-
His
GTG
[ENA]
¢þ
>WENV181071411
OEAL01002310
[OEAL] human gut metagenome; human gut
285
211
-
Glu
CTC
[ENA]
¢þ
>WENV181071421
OEAL01004102
[OEAL] human gut metagenome; human gut
288
214
-
Gly
TCC
[ENA]
¢þ
>WENV181071430
OEAL01005412
[OEAL] human gut metagenome; human gut
295
220
-
Trp
CCA
[ENA]
¢þ
>WENV181071417
OEAL01003440
[OEAL] human gut metagenome; human gut
295
221
-
Ile
GAT
[ENA]
¢þ
>WENV181071408
OEAL01002019
[OEAL] human gut metagenome; human gut
304
229
-
Gly
GCC
[ENA]
¢þ
>WENV181071404
OEAL01001746
[OEAL] human gut metagenome; human gut
314
238
-
Pro
CGG
[ENA]
¢þ
>WENV181071429
OEAL01005271
[OEAL] human gut metagenome; human gut
321
245
-
Pro
CGG
[ENA]
¢þ
>WENV181071419
OEAL01003455
[OEAL] human gut metagenome; human gut
331
255
-
Arg
CCT
[ENA]
¢þ
>WENV181071420
OEAL01003767
[OEAL] human gut metagenome; human gut
348
264
-
Leu
GAG
[ENA]
¢þ
>WENV181071409
OEAL01002148
[OEAL] human gut metagenome; human gut
370
454
+
Leu
TAG
[ENA]
¢þ
>WENV181071407
OEAL01002019
[OEAL] human gut metagenome; human gut
387
312
-
Phe
GAA
[ENA]
¢þ
>WENV181071403
OEAL01001746
[OEAL] human gut metagenome; human gut
420
347
-
Gln
CTG
[ENA]
¢þ
>WENV181071393
OEAL01000565
[OEAL] human gut metagenome; human gut
422
497
+
Lys
CTT
[ENA]
¢þ
>WENV181071414
OEAL01002945
[OEAL] human gut metagenome; human gut
424
349
-
Ala
TGC
[ENA]
¢þ
>WENV181071402
OEAL01001699
[OEAL] human gut metagenome; human gut
444
371
-
Gly
TCC
[ENA]
¢þ
>WENV181071406
OEAL01002019
[OEAL] human gut metagenome; human gut
470
394
-
Asp
GTC
[ENA]
¢þ
>WENV181071394
OEAL01000565
[OEAL] human gut metagenome; human gut
501
576
+
Glu
CTC
[ENA]
¢þ
>WENV181071391
OEAL01000460
[OEAL] human gut metagenome; human gut
754
836
+
Leu
CAA
[ENA]
¢þ
>WENV181071396
OEAL01000603
[OEAL] human gut metagenome; human gut
818
734
-
Tyr
GTA
[ENA]
¢þ
>WENV181071395
OEAL01000568
[OEAL] human gut metagenome; human gut
832
756
-
Pro
GGG
[ENA]
¢þ
>WENV181071392
OEAL01000465
[OEAL] human gut metagenome; human gut
858
782
-
Pro
GGG
[ENA]
¢þ
>WENV181071389
OEAL01000240
[OEAL] human gut metagenome; human gut
1168
1243
+
Ala
TGC
[ENA]
¢þ
>WENV181071390
OEAL01000240
[OEAL] human gut metagenome; human gut
1254
1330
+
Ile
GAT
[ENA]
¢þ
>WENV181071384
OEAL01000003
[OEAL] human gut metagenome; human gut
1828
1903
+
Ala
TGC
[ENA]
¢þ
>WENV181071386
OEAL01000048
[OEAL] human gut metagenome; human gut
1901
1976
+
Lys
CTT
[ENA]
¢þ
>WENV181071385
OEAL01000003
[OEAL] human gut metagenome; human gut
1928
2004
+
Ile
GAT
[ENA]
¢þ
>WENV181071387
OEAL01000048
[OEAL] human gut metagenome; human gut
2035
2109
+
Glu
CTC
[ENA]
¢þ
>WENV181071388
OEAL01000048
[OEAL] human gut metagenome; human gut
2304
2379
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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