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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OEAW] human metagenome; G_DNA_Buccal mucosa
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181084596
OEAW01004484
[OEAW] human metagenome; G_DNA_Buccal mucosa
45
129
+
Tyr
GTA
[ENA]
¢þ
>WENV181084582
OEAW01000829
[OEAW] human metagenome; G_DNA_Buccal mucosa
56
145
+
Ser
TGA
[ENA]
¢þ
>WENV181084566
OEAW01000143
[OEAW] human metagenome; G_DNA_Buccal mucosa
59
131
+
Val
TAC
[ENA]
¢þ
>WENV181084606
OEAW01009865
[OEAW] human metagenome; G_DNA_Buccal mucosa
76
150
+
fMet
CAT
[ENA]
¢þ
>WENV181084608
OEAW01010629
[OEAW] human metagenome; G_DNA_Buccal mucosa
77
2
-
Arg
TCT
[ENA]
¢þ
>WENV181084594
OEAW01002749
[OEAW] human metagenome; G_DNA_Buccal mucosa
89
164
+
Asn
GTT
[ENA]
¢þ
>WENV181084564
OEAW01000056
[OEAW] human metagenome; G_DNA_Buccal mucosa
91
166
+
Glu
TTC
[ENA]
¢þ
>WENV181084605
OEAW01008959
[OEAW] human metagenome; G_DNA_Buccal mucosa
101
25
-
Ile
GAT
[ENA]
¢þ
>WENV181084603
OEAW01007719
[OEAW] human metagenome; G_DNA_Buccal mucosa
114
24
-
Ser
GCT
[ENA]
¢þ
>WENV181084595
OEAW01003278
[OEAW] human metagenome; G_DNA_Buccal mucosa
119
43
-
Ile2
CAT
[ENA]
¢þ
>WENV181084591
OEAW01001398
[OEAW] human metagenome; G_DNA_Buccal mucosa
127
51
-
Asp
GTC
[ENA]
¢þ
>WENV181084607
OEAW01010411
[OEAW] human metagenome; G_DNA_Buccal mucosa
132
56
-
Val
GAC
[ENA]
¢þ
>WENV181084567
OEAW01000143
[OEAW] human metagenome; G_DNA_Buccal mucosa
134
206
+
Asp
GTC
[ENA]
¢þ
>WENV181084600
OEAW01005092
[OEAW] human metagenome; G_DNA_Buccal mucosa
152
241
+
Ser
GGA
[ENA]
¢þ
>WENV181084583
OEAW01000829
[OEAW] human metagenome; G_DNA_Buccal mucosa
156
229
+
fMet
CAT
[ENA]
¢þ
>WENV181084597
OEAW01004484
[OEAW] human metagenome; G_DNA_Buccal mucosa
172
246
+
Gly
TCC
[ENA]
¢þ
>WENV181084593
OEAW01002177
[OEAW] human metagenome; G_DNA_Buccal mucosa
173
88
-
Leu
AAG
[ENA]
¢þ
>WENV181084599
OEAW01004814
[OEAW] human metagenome; G_DNA_Buccal mucosa
190
105
-
Leu
GAG
[ENA]
¢þ
>WENV181084601
OEAW01005686
[OEAW] human metagenome; G_DNA_Buccal mucosa
198
284
+
Leu
TAA
[ENA]
¢þ
>WENV181084588
OEAW01000980
[OEAW] human metagenome; G_DNA_Buccal mucosa
206
135
-
Arg
CCT
[ENA]
¢þ
>WENV181084604
OEAW01008010
[OEAW] human metagenome; G_DNA_Buccal mucosa
212
136
-
fMet
CAT
[ENA]
¢þ
>WENV181084568
OEAW01000143
[OEAW] human metagenome; G_DNA_Buccal mucosa
231
303
+
Lys
TTT
[ENA]
¢þ
>WENV181084584
OEAW01000829
[OEAW] human metagenome; G_DNA_Buccal mucosa
233
305
+
Phe
GAA
[ENA]
¢þ
>WENV181084602
OEAW01007588
[OEAW] human metagenome; G_DNA_Buccal mucosa
236
147
-
Ser
TGA
[ENA]
¢þ
>WENV181084598
OEAW01004484
[OEAW] human metagenome; G_DNA_Buccal mucosa
250
325
+
Thr
GGT
[ENA]
¢þ
>WENV181084569
OEAW01000143
[OEAW] human metagenome; G_DNA_Buccal mucosa
308
391
+
Leu
TAG
[ENA]
¢þ
>WENV181084585
OEAW01000829
[OEAW] human metagenome; G_DNA_Buccal mucosa
321
393
+
Gly
TCC
[ENA]
¢þ
>WENV181084590
OEAW01001250
[OEAW] human metagenome; G_DNA_Buccal mucosa
325
398
+
Cys
GCA
[ENA]
¢þ
>WENV181084579
OEAW01000791
[OEAW] human metagenome; G_DNA_Buccal mucosa
343
423
+
Tyr
GTA
[ENA]
¢þ
>WENV181084570
OEAW01000143
[OEAW] human metagenome; G_DNA_Buccal mucosa
409
481
+
Thr
TGT
[ENA]
¢þ
>WENV181084560
OEAW01000006
[OEAW] human metagenome; G_DNA_Buccal mucosa
422
350
-
Thr
GGT
[ENA]
¢þ
>WENV181084586
OEAW01000829
[OEAW] human metagenome; G_DNA_Buccal mucosa
425
500
+
Ile
GAT
[ENA]
¢þ
>WENV181084580
OEAW01000791
[OEAW] human metagenome; G_DNA_Buccal mucosa
433
504
+
Gln
TTG
[ENA]
¢þ
>WENV181084592
OEAW01001733
[OEAW] human metagenome; G_DNA_Buccal mucosa
465
538
+
Arg
CCG
[ENA]
¢þ
>WENV181084575
OEAW01000186
[OEAW] human metagenome; G_DNA_Buccal mucosa
474
545
+
Glu
TTC
[ENA]
¢þ
>WENV181084587
OEAW01000829
[OEAW] human metagenome; G_DNA_Buccal mucosa
506
593
+
Ser
GCT
[ENA]
¢þ
>WENV181084571
OEAW01000143
[OEAW] human metagenome; G_DNA_Buccal mucosa
509
580
+
Gly
GCC
[ENA]
¢þ
>WENV181084581
OEAW01000791
[OEAW] human metagenome; G_DNA_Buccal mucosa
513
598
+
Leu
CAA
[ENA]
¢þ
>WENV181084576
OEAW01000186
[OEAW] human metagenome; G_DNA_Buccal mucosa
551
624
+
Asn
GTT
[ENA]
¢þ
>WENV181084572
OEAW01000143
[OEAW] human metagenome; G_DNA_Buccal mucosa
588
673
+
Leu
TAA
[ENA]
¢þ
>WENV181084573
OEAW01000143
[OEAW] human metagenome; G_DNA_Buccal mucosa
685
758
+
Arg
ACG
[ENA]
¢þ
>WENV181084589
OEAW01001033
[OEAW] human metagenome; G_DNA_Buccal mucosa
746
671
-
Lys
CTT
[ENA]
¢þ
>WENV181084574
OEAW01000143
[OEAW] human metagenome; G_DNA_Buccal mucosa
773
849
+
Pro
TGG
[ENA]
¢þ
>WENV181084578
OEAW01000666
[OEAW] human metagenome; G_DNA_Buccal mucosa
826
751
-
Lys
TTT
[ENA]
¢þ
>WENV181084577
OEAW01000666
[OEAW] human metagenome; G_DNA_Buccal mucosa
963
877
-
Leu
TAA
[ENA]
¢þ
>WENV181084563
OEAW01000011
[OEAW] human metagenome; G_DNA_Buccal mucosa
1893
1967
+
Ala
TGC
[ENA]
¢þ
>WENV181084565
OEAW01000140
[OEAW] human metagenome; G_DNA_Buccal mucosa
2008
2084
+
Ile
GAT
[ENA]
¢þ
>WENV181084562
OEAW01000009
[OEAW] human metagenome; G_DNA_Buccal mucosa
3729
3656
-
Lys
CTT
[ENA]
¢þ
>WENV181084561
OEAW01000009
[OEAW] human metagenome; G_DNA_Buccal mucosa
4732
4657
-
Lys
CTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK