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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OECB] human gut metagenome; human gut
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181098298
OECB01001008
[OECB] human gut metagenome; human gut
14
87
+
Gly
GCC
[ENA]
¢þ
>WENV181098300
OECB01001644
[OECB] human gut metagenome; human gut
67
141
+
Ile2
CAT
[ENA]
¢þ
>WENV181098305
OECB01003523
[OECB] human gut metagenome; human gut
81
8
-
Ala
TGC
[ENA]
¢þ
>WENV181098304
OECB01003184
[OECB] human gut metagenome; human gut
132
46
-
Leu
AAG
[ENA]
¢þ
>WENV181098301
OECB01002658
[OECB] human gut metagenome; human gut
142
67
-
Ile
GAT
[ENA]
¢þ
>WENV181098299
OECB01001293
[OECB] human gut metagenome; human gut
148
76
-
Glu
TTC
[ENA]
¢þ
>WENV181098306
OECB01004462
[OECB] human gut metagenome; human gut
157
84
-
Gly
TCC
[ENA]
¢þ
>WENV181098302
OECB01002729
[OECB] human gut metagenome; human gut
159
84
-
Val
GAC
[ENA]
¢þ
>WENV181098303
OECB01002921
[OECB] human gut metagenome; human gut
170
94
-
Pro
TGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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