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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OECZ] human gut metagenome; human gut
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181104165
OECZ01003070
[OECZ] human gut metagenome; human gut
34
108
+
Leu
CAA
[ENA]
¢þ
>WENV181104158
OECZ01001771
[OECZ] human gut metagenome; human gut
51
125
+
Ile
GAT
[ENA]
¢þ
>WENV181104155
OECZ01001447
[OECZ] human gut metagenome; human gut
59
143
+
Tyr
GTA
[ENA]
¢þ
>WENV181104152
OECZ01001094
[OECZ] human gut metagenome; human gut
68
143
+
Gly
GCC
[ENA]
¢þ
>WENV181104157
OECZ01001474
[OECZ] human gut metagenome; human gut
73
3
-
Gly
TCC
[ENA]
¢þ
>WENV181104167
OECZ01003176
[OECZ] human gut metagenome; human gut
84
159
+
Arg
TCT
[ENA]
¢þ
>WENV181104166
OECZ01003072
[OECZ] human gut metagenome; human gut
93
19
-
Ala
TGC
[ENA]
¢þ
>WENV181104160
OECZ01002105
[OECZ] human gut metagenome; human gut
113
38
-
Ile
GAT
[ENA]
¢þ
>WENV181104150
OECZ01000424
[OECZ] human gut metagenome; human gut
118
193
+
Ala
TGC
[ENA]
¢þ
>WENV181104164
OECZ01002968
[OECZ] human gut metagenome; human gut
128
54
-
Val
TAC
[ENA]
¢þ
>WENV181104159
OECZ01001771
[OECZ] human gut metagenome; human gut
142
216
+
Ala
TGC
[ENA]
¢þ
>WENV181104154
OECZ01001380
[OECZ] human gut metagenome; human gut
150
76
-
Glu
CTC
[ENA]
¢þ
>WENV181104153
OECZ01001094
[OECZ] human gut metagenome; human gut
150
225
+
Val
TAC
[ENA]
¢þ
>WENV181104161
OECZ01002248
[OECZ] human gut metagenome; human gut
153
80
-
Gln
CTG
[ENA]
¢þ
>WENV181104163
OECZ01002858
[OECZ] human gut metagenome; human gut
156
81
-
Arg
TCT
[ENA]
¢þ
>WENV181104156
OECZ01001474
[OECZ] human gut metagenome; human gut
181
108
-
Gly
GCC
[ENA]
¢þ
>WENV181104162
OECZ01002299
[OECZ] human gut metagenome; human gut
188
112
-
Arg
ACG
[ENA]
¢þ
>WENV181104151
OECZ01000424
[OECZ] human gut metagenome; human gut
197
273
+
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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