Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA gene List

[OEEH] terrestrial metagenome; terrestrial

HIT: 79 sequence(s).

Download Sequence
View ClustalW result

The reliable tRNA genes	All candidate tRNA genes

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
	>WENV181106548	OEEH01000408	[OEEH] terrestrial metagenome; terrestrial		1	76	+	Glu	TTC	[ENA]	◯
	>WENV181106537	OEEH01000142	[OEEH] terrestrial metagenome; terrestrial		8	95	+	Ser	GGA	[ENA]	◯
	>WENV181106497	OEEH01000018	[OEEH] terrestrial metagenome; terrestrial		112	188	+	Asp	GTC	[ENA]	◯
	>WENV181106547	OEEH01000317	[OEEH] terrestrial metagenome; terrestrial		163	88	-	Lys	TTT	[ENA]	◯
	>WENV181106543	OEEH01000192	[OEEH] terrestrial metagenome; terrestrial		170	95	-	Ala	GGC	[ENA]	◯
	>WENV181106545	OEEH01000285	[OEEH] terrestrial metagenome; terrestrial		186	111	-	Ala	TGC	[ENA]	◯
	>WENV181106498	OEEH01000018	[OEEH] terrestrial metagenome; terrestrial		197	272	+	Trp	CCA	[ENA]	◯
	>WENV181106546	OEEH01000317	[OEEH] terrestrial metagenome; terrestrial		243	168	-	Val	TAC	[ENA]	◯
	>WENV181106544	OEEH01000285	[OEEH] terrestrial metagenome; terrestrial		305	229	-	Ile	GAT	[ENA]	◯
	>WENV181106534	OEEH01000103	[OEEH] terrestrial metagenome; terrestrial		348	264	-	Tyr	GTA	[ENA]	◯
	>WENV181106541	OEEH01000180	[OEEH] terrestrial metagenome; terrestrial		381	306	-	Thr	GGT	[ENA]	◯
	>WENV181106540	OEEH01000180	[OEEH] terrestrial metagenome; terrestrial		461	387	-	Gly	TCC	[ENA]	◯
	>WENV181106539	OEEH01000180	[OEEH] terrestrial metagenome; terrestrial		662	578	-	Tyr	GTA	[ENA]	◯
	>WENV181106538	OEEH01000180	[OEEH] terrestrial metagenome; terrestrial		746	671	-	Thr	TGT	[ENA]	◯
	>WENV181106532	OEEH01000091	[OEEH] terrestrial metagenome; terrestrial		1158	1082	-	Arg	TCT	[ENA]	◯
	>WENV181106483	OEEH01000006	[OEEH] terrestrial metagenome; terrestrial		1795	1720	-	Gly	GCC	[ENA]	◯
	>WENV181106503	OEEH01000021	[OEEH] terrestrial metagenome; terrestrial		1831	1747	-	Leu	CAA	[ENA]	◯
	>WENV181106482	OEEH01000006	[OEEH] terrestrial metagenome; terrestrial		1906	1831	-	Gly	GCC	[ENA]	◯
	>WENV181106481	OEEH01000006	[OEEH] terrestrial metagenome; terrestrial		2017	1942	-	Gly	GCC	[ENA]	◯
	>WENV181106542	OEEH01000192	[OEEH] terrestrial metagenome; terrestrial		2870	2945	+	Val	TAC	[ENA]	◯
	>WENV181106526	OEEH01000066	[OEEH] terrestrial metagenome; terrestrial		3227	3302	+	Trp	CCA	[ENA]	◯
	>WENV181106535	OEEH01000104	[OEEH] terrestrial metagenome; terrestrial		3330	3405	+	Asn	GTT	[ENA]	◯
	>WENV181106531	OEEH01000082	[OEEH] terrestrial metagenome; terrestrial		6013	6094	+	Tyr	GTA	[ENA]	◯
	>WENV181106517	OEEH01000039	[OEEH] terrestrial metagenome; terrestrial		7510	7436	-	Gln	CTG	[ENA]	◯
	>WENV181106516	OEEH01000039	[OEEH] terrestrial metagenome; terrestrial		7622	7548	-	Gln	CTG	[ENA]	◯
	>WENV181106536	OEEH01000141	[OEEH] terrestrial metagenome; terrestrial		7725	7650	-	Thr	CGT	[ENA]	◯
	>WENV181106515	OEEH01000039	[OEEH] terrestrial metagenome; terrestrial		7746	7670	-	Met	CAT	[ENA]	◯
	>WENV181106514	OEEH01000039	[OEEH] terrestrial metagenome; terrestrial		7836	7762	-	Gln	TTG	[ENA]	◯
	>WENV181106513	OEEH01000039	[OEEH] terrestrial metagenome; terrestrial		7945	7871	-	Gln	TTG	[ENA]	◯
	>WENV181106512	OEEH01000039	[OEEH] terrestrial metagenome; terrestrial		8053	7969	-	Leu	TAG	[ENA]	◯
	>WENV181106511	OEEH01000039	[OEEH] terrestrial metagenome; terrestrial		8139	8063	-	Met	CAT	[ENA]	◯
	>WENV181106506	OEEH01000028	[OEEH] terrestrial metagenome; terrestrial		13529	13454	-	Asn	GTT	[ENA]	◯
	>WENV181106491	OEEH01000014	[OEEH] terrestrial metagenome; terrestrial		14368	14443	+	Gly	GCC	[ENA]	◯
	>WENV181106492	OEEH01000014	[OEEH] terrestrial metagenome; terrestrial		14498	14571	+	Cys	GCA	[ENA]	◯
	>WENV181106505	OEEH01000028	[OEEH] terrestrial metagenome; terrestrial		14521	14610	+	Ser	CGA	[ENA]	◯
	>WENV181106493	OEEH01000014	[OEEH] terrestrial metagenome; terrestrial		14584	14670	+	Leu	TAA	[ENA]	◯
	>WENV181106527	OEEH01000067	[OEEH] terrestrial metagenome; terrestrial		16329	16405	+	Pro	GGG	[ENA]	◯
	>WENV181106504	OEEH01000023	[OEEH] terrestrial metagenome; terrestrial		16396	16472	+	Pro	CGG	[ENA]	◯
	>WENV181106519	OEEH01000045	[OEEH] terrestrial metagenome; terrestrial		17326	17255	-	Glu	CTC	[ENA]	◯
	>WENV181106486	OEEH01000008	[OEEH] terrestrial metagenome; terrestrial		19851	19776	-	Phe	GAA	[ENA]	◯
	>WENV181106524	OEEH01000056	[OEEH] terrestrial metagenome; terrestrial		23637	23711	+	Glu	CTC	[ENA]	◯
	>WENV181106533	OEEH01000093	[OEEH] terrestrial metagenome; terrestrial		23677	23761	+	Leu	CAG	[ENA]	◯
	>WENV181106530	OEEH01000077	[OEEH] terrestrial metagenome; terrestrial		24604	24528	-	Asp	GTC	[ENA]	◯
	>WENV181106522	OEEH01000051	[OEEH] terrestrial metagenome; terrestrial		27727	27653	-	Ala	TGC	[ENA]	◯
	>WENV181106521	OEEH01000051	[OEEH] terrestrial metagenome; terrestrial		27857	27782	-	Ile	GAT	[ENA]	◯
	>WENV181106496	OEEH01000017	[OEEH] terrestrial metagenome; terrestrial		28226	28301	+	Ile2	CAT	[ENA]	◯
	>WENV181106528	OEEH01000070	[OEEH] terrestrial metagenome; terrestrial		29032	28935	-	SeC	TCA	[ENA]	◯
	>WENV181106520	OEEH01000051	[OEEH] terrestrial metagenome; terrestrial		29874	29798	-	fMet	CAT	[ENA]	◯
	>WENV181106525	OEEH01000056	[OEEH] terrestrial metagenome; terrestrial		31690	31765	+	Arg	CCT	[ENA]	◯
	>WENV181106480	OEEH01000006	[OEEH] terrestrial metagenome; terrestrial		31751	31826	+	Phe	GAA	[ENA]	◯
	>WENV181106523	OEEH01000054	[OEEH] terrestrial metagenome; terrestrial		32354	32283	-	fMet	CAT	[ENA]	◯
	>WENV181106518	OEEH01000042	[OEEH] terrestrial metagenome; terrestrial		32605	32679	+	Pro	GGG	[ENA]	◯
	>WENV181106529	OEEH01000077	[OEEH] terrestrial metagenome; terrestrial		32607	32531	-	Asp	GTC	[ENA]	◯
	>WENV181106499	OEEH01000018	[OEEH] terrestrial metagenome; terrestrial		35615	35691	+	Arg	CCG	[ENA]	◯
	>WENV181106500	OEEH01000018	[OEEH] terrestrial metagenome; terrestrial		35750	35825	+	His	GTG	[ENA]	◯
	>WENV181106501	OEEH01000018	[OEEH] terrestrial metagenome; terrestrial		35846	35932	+	Leu	CAG	[ENA]	◯
	>WENV181106502	OEEH01000018	[OEEH] terrestrial metagenome; terrestrial		35975	36051	+	Pro	TGG	[ENA]	◯
	>WENV181106508	OEEH01000034	[OEEH] terrestrial metagenome; terrestrial		41762	41837	+	Lys	TTT	[ENA]	◯
	>WENV181106509	OEEH01000034	[OEEH] terrestrial metagenome; terrestrial		41973	42048	+	Val	TAC	[ENA]	◯
	>WENV181106510	OEEH01000034	[OEEH] terrestrial metagenome; terrestrial		42053	42128	+	Lys	TTT	[ENA]	◯
	>WENV181106495	OEEH01000015	[OEEH] terrestrial metagenome; terrestrial		48219	48143	-	fMet	CAT	[ENA]	◯
	>WENV181106507	OEEH01000029	[OEEH] terrestrial metagenome; terrestrial		48336	48412	+	Pro	GGG	[ENA]	◯
	>WENV181106476	OEEH01000001	[OEEH] terrestrial metagenome; terrestrial		48809	48733	-	fMet	CAT	[ENA]	◯
	>WENV181106475	OEEH01000001	[OEEH] terrestrial metagenome; terrestrial		48919	48843	-	fMet	CAT	[ENA]	◯
	>WENV181106474	OEEH01000001	[OEEH] terrestrial metagenome; terrestrial		49029	48953	-	fMet	CAT	[ENA]	◯
	>WENV181106488	OEEH01000011	[OEEH] terrestrial metagenome; terrestrial		50592	50678	+	Leu	CAG	[ENA]	◯
	>WENV181106489	OEEH01000011	[OEEH] terrestrial metagenome; terrestrial		50707	50793	+	Leu	CAG	[ENA]	◯
	>WENV181106490	OEEH01000011	[OEEH] terrestrial metagenome; terrestrial		50828	50914	+	Leu	CAG	[ENA]	◯
	>WENV181106494	OEEH01000015	[OEEH] terrestrial metagenome; terrestrial		52088	52002	-	Leu	GAG	[ENA]	◯
	>WENV181106477	OEEH01000002	[OEEH] terrestrial metagenome; terrestrial		94942	95018	+	Val	GAC	[ENA]	◯
	>WENV181106478	OEEH01000002	[OEEH] terrestrial metagenome; terrestrial		95023	95099	+	Val	GAC	[ENA]	◯
	>WENV181106484	OEEH01000007	[OEEH] terrestrial metagenome; terrestrial		105274	105180	-	SeC	TCA	[ENA]	◯
	>WENV181106487	OEEH01000010	[OEEH] terrestrial metagenome; terrestrial		105783	105696	-	Ser	TGA	[ENA]	◯
	>WENV181106485	OEEH01000008	[OEEH] terrestrial metagenome; terrestrial		131160	131233	+	Gly	CCC	[ENA]	◯
	>WENV181106479	OEEH01000005	[OEEH] terrestrial metagenome; terrestrial		176129	176203	+	Arg	CCT	[ENA]	◯
	>WENV181106470	OEEH01000001	[OEEH] terrestrial metagenome; terrestrial		177710	177802	+	Ser	GCT	[ENA]	◯
	>WENV181106471	OEEH01000001	[OEEH] terrestrial metagenome; terrestrial		177806	177882	+	Arg	ACG	[ENA]	◯
	>WENV181106472	OEEH01000001	[OEEH] terrestrial metagenome; terrestrial		178080	178156	+	Arg	ACG	[ENA]	◯
	>WENV181106473	OEEH01000001	[OEEH] terrestrial metagenome; terrestrial		210101	210176	+	Ile2	CAT	[ENA]	◯
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence
View ClustalW result

BACK