This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OEFR] human metagenome; G_DNA_Anterior nares
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181124382
OEFR01003840
[OEFR] human metagenome; G_DNA_Anterior nares
13
87
+
Pro
TGG
[ENA]
¢þ
>WENV181124363
OEFR01000362
[OEFR] human metagenome; G_DNA_Anterior nares
37
113
+
Glu
CTC
[ENA]
¢þ
>WENV181124395
OEFR01009668
[OEFR] human metagenome; G_DNA_Anterior nares
39
114
+
Ala
TGC
[ENA]
¢þ
>WENV181124394
OEFR01009439
[OEFR] human metagenome; G_DNA_Anterior nares
48
120
+
Gln
CTG
[ENA]
¢þ
>WENV181124353
OEFR01000123
[OEFR] human metagenome; G_DNA_Anterior nares
77
3
-
Pro
CGG
[ENA]
¢þ
>WENV181124392
OEFR01007005
[OEFR] human metagenome; G_DNA_Anterior nares
93
168
+
Arg
TCT
[ENA]
¢þ
>WENV181124388
OEFR01005575
[OEFR] human metagenome; G_DNA_Anterior nares
100
194
+
SeC
TCA
[ENA]
¢þ
>WENV181124339
OEFR01000046
[OEFR] human metagenome; G_DNA_Anterior nares
101
17
-
Leu
CAG
[ENA]
¢þ
>WENV181124379
OEFR01003362
[OEFR] human metagenome; G_DNA_Anterior nares
101
25
-
Met
CAT
[ENA]
¢þ
>WENV181124381
OEFR01003494
[OEFR] human metagenome; G_DNA_Anterior nares
102
15
-
Ser
GCT
[ENA]
¢þ
>WENV181124380
OEFR01003366
[OEFR] human metagenome; G_DNA_Anterior nares
115
190
+
Ile2
CAT
[ENA]
¢þ
>WENV181124393
OEFR01008627
[OEFR] human metagenome; G_DNA_Anterior nares
125
36
-
Ser
TGA
[ENA]
¢þ
>WENV181124383
OEFR01003913
[OEFR] human metagenome; G_DNA_Anterior nares
131
204
+
Asn
GTT
[ENA]
¢þ
>WENV181124355
OEFR01000178
[OEFR] human metagenome; G_DNA_Anterior nares
136
60
-
Ile
GAT
[ENA]
¢þ
>WENV181124378
OEFR01002832
[OEFR] human metagenome; G_DNA_Anterior nares
147
219
+
Gln
TTG
[ENA]
¢þ
>WENV181124391
OEFR01006038
[OEFR] human metagenome; G_DNA_Anterior nares
149
76
-
Thr
TGT
[ENA]
¢þ
>WENV181124374
OEFR01001788
[OEFR] human metagenome; G_DNA_Anterior nares
153
82
-
Cys
GCA
[ENA]
¢þ
>WENV181124387
OEFR01005418
[OEFR] human metagenome; G_DNA_Anterior nares
163
236
+
Trp
CCA
[ENA]
¢þ
>WENV181124389
OEFR01005714
[OEFR] human metagenome; G_DNA_Anterior nares
164
82
-
Leu
TAG
[ENA]
¢þ
>WENV181124384
OEFR01005105
[OEFR] human metagenome; G_DNA_Anterior nares
183
255
+
Arg
CCG
[ENA]
¢þ
>WENV181124376
OEFR01002378
[OEFR] human metagenome; G_DNA_Anterior nares
196
268
+
Gln
CTG
[ENA]
¢þ
>WENV181124362
OEFR01000306
[OEFR] human metagenome; G_DNA_Anterior nares
199
284
+
Ser
TGA
[ENA]
¢þ
>WENV181124390
OEFR01005921
[OEFR] human metagenome; G_DNA_Anterior nares
230
156
-
Ile2
CAT
[ENA]
¢þ
>WENV181124385
OEFR01005168
[OEFR] human metagenome; G_DNA_Anterior nares
239
164
-
Thr
CGT
[ENA]
¢þ
>WENV181124373
OEFR01001788
[OEFR] human metagenome; G_DNA_Anterior nares
259
184
-
Gly
GCC
[ENA]
¢þ
>WENV181124367
OEFR01000810
[OEFR] human metagenome; G_DNA_Anterior nares
261
189
-
Val
CAC
[ENA]
¢þ
>WENV181124386
OEFR01005211
[OEFR] human metagenome; G_DNA_Anterior nares
281
208
-
Arg
CCT
[ENA]
¢þ
>WENV181124377
OEFR01002642
[OEFR] human metagenome; G_DNA_Anterior nares
291
366
+
Val
TAC
[ENA]
¢þ
>WENV181124369
OEFR01001051
[OEFR] human metagenome; G_DNA_Anterior nares
294
220
-
Leu
TAA
[ENA]
¢þ
>WENV181124375
OEFR01001867
[OEFR] human metagenome; G_DNA_Anterior nares
313
386
+
Gly
CCC
[ENA]
¢þ
>WENV181124372
OEFR01001788
[OEFR] human metagenome; G_DNA_Anterior nares
369
297
-
Val
GAC
[ENA]
¢þ
>WENV181124371
OEFR01001612
[OEFR] human metagenome; G_DNA_Anterior nares
400
327
-
Ala
TGC
[ENA]
¢þ
>WENV181124358
OEFR01000235
[OEFR] human metagenome; G_DNA_Anterior nares
415
504
+
Ser
CGA
[ENA]
¢þ
>WENV181124370
OEFR01001110
[OEFR] human metagenome; G_DNA_Anterior nares
489
562
+
Lys
CTT
[ENA]
¢þ
>WENV181124348
OEFR01000092
[OEFR] human metagenome; G_DNA_Anterior nares
545
472
-
Lys
TTT
[ENA]
¢þ
>WENV181124368
OEFR01000890
[OEFR] human metagenome; G_DNA_Anterior nares
559
635
+
fMet
CAT
[ENA]
¢þ
>WENV181124365
OEFR01000449
[OEFR] human metagenome; G_DNA_Anterior nares
584
669
+
Leu
CAG
[ENA]
¢þ
>WENV181124364
OEFR01000413
[OEFR] human metagenome; G_DNA_Anterior nares
647
722
+
Thr
CGT
[ENA]
¢þ
>WENV181124366
OEFR01000551
[OEFR] human metagenome; G_DNA_Anterior nares
668
595
-
Arg
ACG
[ENA]
¢þ
>WENV181124346
OEFR01000092
[OEFR] human metagenome; G_DNA_Anterior nares
698
773
+
Glu
TTC
[ENA]
¢þ
>WENV181124347
OEFR01000092
[OEFR] human metagenome; G_DNA_Anterior nares
775
850
+
Asp
GTC
[ENA]
¢þ
>WENV181124328
OEFR01000003
[OEFR] human metagenome; G_DNA_Anterior nares
1090
1008
-
Leu
TAG
[ENA]
¢þ
>WENV181124357
OEFR01000227
[OEFR] human metagenome; G_DNA_Anterior nares
1126
1051
-
Thr
TGT
[ENA]
¢þ
>WENV181124360
OEFR01000282
[OEFR] human metagenome; G_DNA_Anterior nares
1267
1179
-
Ser
TGA
[ENA]
¢þ
>WENV181124352
OEFR01000120
[OEFR] human metagenome; G_DNA_Anterior nares
1363
1290
-
Asn
GTT
[ENA]
¢þ
>WENV181124361
OEFR01000296
[OEFR] human metagenome; G_DNA_Anterior nares
1697
1623
-
Val
GAC
[ENA]
¢þ
>WENV181124344
OEFR01000076
[OEFR] human metagenome; G_DNA_Anterior nares
1726
1799
+
Ala
CGC
[ENA]
¢þ
>WENV181124351
OEFR01000113
[OEFR] human metagenome; G_DNA_Anterior nares
1821
1749
-
Gly
TCC
[ENA]
¢þ
>WENV181124350
OEFR01000113
[OEFR] human metagenome; G_DNA_Anterior nares
1963
2039
+
Pro
TGG
[ENA]
¢þ
>WENV181124356
OEFR01000181
[OEFR] human metagenome; G_DNA_Anterior nares
2096
2170
+
Val
TAC
[ENA]
¢þ
>WENV181124359
OEFR01000258
[OEFR] human metagenome; G_DNA_Anterior nares
2121
2211
+
Ser
GGA
[ENA]
¢þ
>WENV181124343
OEFR01000071
[OEFR] human metagenome; G_DNA_Anterior nares
2725
2799
+
fMet
CAT
[ENA]
¢þ
>WENV181124340
OEFR01000055
[OEFR] human metagenome; G_DNA_Anterior nares
3450
3361
-
Leu
GAG
[ENA]
¢þ
>WENV181124354
OEFR01000154
[OEFR] human metagenome; G_DNA_Anterior nares
3527
3601
+
Gln
TTG
[ENA]
¢þ
>WENV181124349
OEFR01000100
[OEFR] human metagenome; G_DNA_Anterior nares
4241
4168
-
Arg
CCT
[ENA]
¢þ
>WENV181124341
OEFR01000056
[OEFR] human metagenome; G_DNA_Anterior nares
4654
4581
-
Gly
CCC
[ENA]
¢þ
>WENV181124342
OEFR01000070
[OEFR] human metagenome; G_DNA_Anterior nares
4823
4749
-
Ile2
CAT
[ENA]
¢þ
>WENV181124345
OEFR01000089
[OEFR] human metagenome; G_DNA_Anterior nares
5129
5055
-
Pro
GGG
[ENA]
¢þ
>WENV181124335
OEFR01000022
[OEFR] human metagenome; G_DNA_Anterior nares
5321
5394
+
Arg
TCT
[ENA]
¢þ
>WENV181124338
OEFR01000034
[OEFR] human metagenome; G_DNA_Anterior nares
5973
5899
-
Leu
TAA
[ENA]
¢þ
>WENV181124334
OEFR01000021
[OEFR] human metagenome; G_DNA_Anterior nares
6407
6333
-
Leu
CAA
[ENA]
¢þ
>WENV181124329
OEFR01000015
[OEFR] human metagenome; G_DNA_Anterior nares
7148
7073
-
Arg
CCG
[ENA]
¢þ
>WENV181124336
OEFR01000022
[OEFR] human metagenome; G_DNA_Anterior nares
8620
8693
+
His
GTG
[ENA]
¢þ
>WENV181124337
OEFR01000022
[OEFR] human metagenome; G_DNA_Anterior nares
9350
9423
+
Lys
CTT
[ENA]
¢þ
>WENV181124333
OEFR01000017
[OEFR] human metagenome; G_DNA_Anterior nares
10269
10194
-
Trp
CCA
[ENA]
¢þ
>WENV181124332
OEFR01000017
[OEFR] human metagenome; G_DNA_Anterior nares
10816
10742
-
Met
CAT
[ENA]
¢þ
>WENV181124331
OEFR01000017
[OEFR] human metagenome; G_DNA_Anterior nares
10995
10922
-
Thr
GGT
[ENA]
¢þ
>WENV181124330
OEFR01000017
[OEFR] human metagenome; G_DNA_Anterior nares
11313
11231
-
Tyr
GTA
[ENA]
¢þ
>WENV181124327
OEFR01000003
[OEFR] human metagenome; G_DNA_Anterior nares
16492
16419
-
Ala
GGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK