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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
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HOW TO USE
tRNA gene List
[OEHZ] human gut metagenome; human gut
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181151939
OEHZ01006476
[OEHZ] human gut metagenome; human gut
33
119
+
Ser
TGA
[ENA]
¢þ
>WENV181151933
OEHZ01003472
[OEHZ] human gut metagenome; human gut
45
119
+
Lys
CTT
[ENA]
¢þ
>WENV181151931
OEHZ01003168
[OEHZ] human gut metagenome; human gut
45
119
+
Lys
CTT
[ENA]
¢þ
>WENV181151924
OEHZ01001470
[OEHZ] human gut metagenome; human gut
49
124
+
Gly
GCC
[ENA]
¢þ
>WENV181151904
OEHZ01000010
[OEHZ] human gut metagenome; human gut
53
128
+
Pro
CGG
[ENA]
¢þ
>WENV181151923
OEHZ01001165
[OEHZ] human gut metagenome; human gut
81
168
+
Ser
GCT
[ENA]
¢þ
>WENV181151936
OEHZ01004421
[OEHZ] human gut metagenome; human gut
103
178
+
His
GTG
[ENA]
¢þ
>WENV181151938
OEHZ01006168
[OEHZ] human gut metagenome; human gut
117
191
+
Thr
TGT
[ENA]
¢þ
>WENV181151932
OEHZ01003175
[OEHZ] human gut metagenome; human gut
132
206
+
Pro
GGG
[ENA]
¢þ
>WENV181151921
OEHZ01000957
[OEHZ] human gut metagenome; human gut
135
46
-
Leu
GAG
[ENA]
¢þ
>WENV181151937
OEHZ01004596
[OEHZ] human gut metagenome; human gut
139
213
+
Arg
CCG
[ENA]
¢þ
>WENV181151934
OEHZ01003737
[OEHZ] human gut metagenome; human gut
144
225
+
Leu
TAA
[ENA]
¢þ
>WENV181151926
OEHZ01001865
[OEHZ] human gut metagenome; human gut
170
242
+
Val
GAC
[ENA]
¢þ
>WENV181151925
OEHZ01001852
[OEHZ] human gut metagenome; human gut
233
319
+
Ser
CGA
[ENA]
¢þ
>WENV181151935
OEHZ01003895
[OEHZ] human gut metagenome; human gut
250
176
-
Gln
CTG
[ENA]
¢þ
>WENV181151929
OEHZ01002206
[OEHZ] human gut metagenome; human gut
256
329
+
Ala
GGC
[ENA]
¢þ
>WENV181151922
OEHZ01001152
[OEHZ] human gut metagenome; human gut
268
180
-
Leu
GAG
[ENA]
¢þ
>WENV181151920
OEHZ01000638
[OEHZ] human gut metagenome; human gut
280
205
-
Trp
CCA
[ENA]
¢þ
>WENV181151927
OEHZ01001865
[OEHZ] human gut metagenome; human gut
290
363
+
Val
CAC
[ENA]
¢þ
>WENV181151928
OEHZ01002106
[OEHZ] human gut metagenome; human gut
333
260
-
Arg
CCT
[ENA]
¢þ
>WENV181151930
OEHZ01002222
[OEHZ] human gut metagenome; human gut
348
274
-
Arg
ACG
[ENA]
¢þ
>WENV181151916
OEHZ01000363
[OEHZ] human gut metagenome; human gut
445
371
-
Asp
GTC
[ENA]
¢þ
>WENV181151917
OEHZ01000373
[OEHZ] human gut metagenome; human gut
604
528
-
fMet
CAT
[ENA]
¢þ
>WENV181151910
OEHZ01000216
[OEHZ] human gut metagenome; human gut
606
680
+
Pro
TGG
[ENA]
¢þ
>WENV181151914
OEHZ01000272
[OEHZ] human gut metagenome; human gut
622
548
-
Val
TAC
[ENA]
¢þ
>WENV181151918
OEHZ01000418
[OEHZ] human gut metagenome; human gut
653
573
-
Leu
TAA
[ENA]
¢þ
>WENV181151919
OEHZ01000444
[OEHZ] human gut metagenome; human gut
866
791
-
Gln
TTG
[ENA]
¢þ
>WENV181151913
OEHZ01000257
[OEHZ] human gut metagenome; human gut
892
818
-
Met
CAT
[ENA]
¢þ
>WENV181151915
OEHZ01000332
[OEHZ] human gut metagenome; human gut
998
925
-
Lys
TTT
[ENA]
¢þ
>WENV181151911
OEHZ01000220
[OEHZ] human gut metagenome; human gut
1000
1073
+
Arg
CCT
[ENA]
¢þ
>WENV181151908
OEHZ01000140
[OEHZ] human gut metagenome; human gut
1047
974
-
Ala
GGC
[ENA]
¢þ
>WENV181151912
OEHZ01000257
[OEHZ] human gut metagenome; human gut
1051
969
-
Tyr
GTA
[ENA]
¢þ
>WENV181151909
OEHZ01000200
[OEHZ] human gut metagenome; human gut
1060
1135
+
Pro
TGG
[ENA]
¢þ
>WENV181151907
OEHZ01000140
[OEHZ] human gut metagenome; human gut
1121
1048
-
Ala
TGC
[ENA]
¢þ
>WENV181151906
OEHZ01000140
[OEHZ] human gut metagenome; human gut
1234
1160
-
Ile
GAT
[ENA]
¢þ
>WENV181151905
OEHZ01000017
[OEHZ] human gut metagenome; human gut
2041
1968
-
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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