This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OELE] metagenome; 1998
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181185196
OELE01000808
[OELE] metagenome; 1998
78
3
-
His
GTG
[ENA]
¢þ
>WENV181185212
OELE01001309
[OELE] metagenome; 1998
79
153
+
Leu
TAG
[ENA]
¢þ
>WENV181185171
OELE01000059
[OELE] metagenome; 1998
84
157
+
Thr
GGT
[ENA]
¢þ
>WENV181185190
OELE01000661
[OELE] metagenome; 1998
92
181
+
Ser
GGA
[ENA]
¢þ
>WENV181185165
OELE01000033
[OELE] metagenome; 1998
93
4
-
Ser
GCT
[ENA]
¢þ
>WENV181185192
OELE01000686
[OELE] metagenome; 1998
93
168
+
His
GTG
[ENA]
¢þ
>WENV181185220
OELE01001310
[OELE] metagenome; 1998
139
67
-
Val
TAC
[ENA]
¢þ
>WENV181185167
OELE01000035
[OELE] metagenome; 1998
153
229
+
Ile
GAT
[ENA]
¢þ
>WENV181185213
OELE01001309
[OELE] metagenome; 1998
157
231
+
Leu
CAA
[ENA]
¢þ
>WENV181185193
OELE01000686
[OELE] metagenome; 1998
170
253
+
Tyr
GTA
[ENA]
¢þ
>WENV181185219
OELE01001310
[OELE] metagenome; 1998
214
140
-
Ile
GAT
[ENA]
¢þ
>WENV181185183
OELE01000374
[OELE] metagenome; 1998
229
305
+
fMet
CAT
[ENA]
¢þ
>WENV181185225
OELE01001412
[OELE] metagenome; 1998
242
168
-
Thr
TGT
[ENA]
¢þ
>WENV181185168
OELE01000035
[OELE] metagenome; 1998
245
319
+
Ala
TGC
[ENA]
¢þ
>WENV181185200
OELE01000869
[OELE] metagenome; 1998
268
344
+
Arg
CCT
[ENA]
¢þ
>WENV181185218
OELE01001310
[OELE] metagenome; 1998
289
215
-
Arg
CCT
[ENA]
¢þ
>WENV181185176
OELE01000184
[OELE] metagenome; 1998
302
230
-
Trp
CCA
[ENA]
¢þ
>WENV181185222
OELE01001383
[OELE] metagenome; 1998
342
415
+
Phe
GAA
[ENA]
¢þ
>WENV181185214
OELE01001309
[OELE] metagenome; 1998
376
449
+
Arg
ACG
[ENA]
¢þ
>WENV181185199
OELE01000865
[OELE] metagenome; 1998
392
308
-
Tyr
GTA
[ENA]
¢þ
>WENV181185226
OELE01001419
[OELE] metagenome; 1998
438
365
-
Gly
TCC
[ENA]
¢þ
>WENV181185217
OELE01001310
[OELE] metagenome; 1998
493
420
-
Lys
TTT
[ENA]
¢þ
>WENV181185201
OELE01000887
[OELE] metagenome; 1998
536
609
+
Thr
CGT
[ENA]
¢þ
>WENV181185185
OELE01000430
[OELE] metagenome; 1998
552
626
+
Gly
GCC
[ENA]
¢þ
>WENV181185215
OELE01001309
[OELE] metagenome; 1998
553
624
+
Gly
TCC
[ENA]
¢þ
>WENV181185150
OELE01000002
[OELE] metagenome; 1998
613
687
+
Ile
GAT
[ENA]
¢þ
>WENV181185164
OELE01000033
[OELE] metagenome; 1998
716
642
-
Leu
TAA
[ENA]
¢þ
>WENV181185175
OELE01000137
[OELE] metagenome; 1998
778
703
-
Ala
TGC
[ENA]
¢þ
>WENV181185177
OELE01000197
[OELE] metagenome; 1998
793
870
+
Glu
CTC
[ENA]
¢þ
>WENV181185163
OELE01000033
[OELE] metagenome; 1998
794
720
-
Thr
TGT
[ENA]
¢þ
>WENV181185216
OELE01001309
[OELE] metagenome; 1998
829
902
+
Phe
GAA
[ENA]
¢þ
>WENV181185202
OELE01000887
[OELE] metagenome; 1998
870
943
+
Leu
TAG
[ENA]
¢þ
>WENV181185208
OELE01001104
[OELE] metagenome; 1998
894
969
+
Arg
TCG
[ENA]
¢þ
>WENV181185174
OELE01000137
[OELE] metagenome; 1998
920
844
-
Ile
GAT
[ENA]
¢þ
>WENV181185179
OELE01000307
[OELE] metagenome; 1998
934
1009
+
Phe
GAA
[ENA]
¢þ
>WENV181185203
OELE01000887
[OELE] metagenome; 1998
947
1022
+
Pro
GGG
[ENA]
¢þ
>WENV181185207
OELE01001083
[OELE] metagenome; 1998
995
920
-
Ala
TGC
[ENA]
¢þ
>WENV181185182
OELE01000371
[OELE] metagenome; 1998
1004
932
-
Val
TAC
[ENA]
¢þ
>WENV181185162
OELE01000033
[OELE] metagenome; 1998
1012
941
-
Gln
CTG
[ENA]
¢þ
>WENV181185166
OELE01000034
[OELE] metagenome; 1998
1061
1147
+
Leu
TAA
[ENA]
¢þ
>WENV181185206
OELE01001083
[OELE] metagenome; 1998
1120
1044
-
Ile
GAT
[ENA]
¢þ
>WENV181185209
OELE01001143
[OELE] metagenome; 1998
1166
1242
+
Pro
GGG
[ENA]
¢þ
>WENV181185186
OELE01000452
[OELE] metagenome; 1998
1309
1220
-
Ser
TGA
[ENA]
¢þ
>WENV181185194
OELE01000734
[OELE] metagenome; 1998
1361
1436
+
Ala
CGC
[ENA]
¢þ
>WENV181185184
OELE01000380
[OELE] metagenome; 1998
1542
1618
+
Arg
TCT
[ENA]
¢þ
>WENV181185172
OELE01000124
[OELE] metagenome; 1998
1573
1648
+
Val
TAC
[ENA]
¢þ
>WENV181185197
OELE01000821
[OELE] metagenome; 1998
1590
1508
-
Leu
TAG
[ENA]
¢þ
>WENV181185173
OELE01000124
[OELE] metagenome; 1998
1771
1847
+
Asp
GTC
[ENA]
¢þ
>WENV181185210
OELE01001253
[OELE] metagenome; 1998
1791
1865
+
fMet
CAT
[ENA]
¢þ
>WENV181185211
OELE01001253
[OELE] metagenome; 1998
1907
1983
+
His
GTG
[ENA]
¢þ
>WENV181185161
OELE01000033
[OELE] metagenome; 1998
1964
1893
-
Thr
GGT
[ENA]
¢þ
>WENV181185170
OELE01000045
[OELE] metagenome; 1998
2120
2045
-
Lys
CTT
[ENA]
¢þ
>WENV181185224
OELE01001402
[OELE] metagenome; 1998
2222
2147
-
Ala
GGC
[ENA]
¢þ
>WENV181185169
OELE01000045
[OELE] metagenome; 1998
2251
2175
-
Arg
CCG
[ENA]
¢þ
>WENV181185160
OELE01000033
[OELE] metagenome; 1998
2423
2350
-
Sup
TCA
[ENA]
¢þ
>WENV181185159
OELE01000033
[OELE] metagenome; 1998
2498
2427
-
Gln
TTG
[ENA]
¢þ
>WENV181185158
OELE01000033
[OELE] metagenome; 1998
2574
2503
-
Gly
TCC
[ENA]
¢þ
>WENV181185188
OELE01000568
[OELE] metagenome; 1998
2597
2674
+
Glu
TTC
[ENA]
¢þ
>WENV181185157
OELE01000033
[OELE] metagenome; 1998
3274
3201
-
Glu
CTC
[ENA]
¢þ
>WENV181185156
OELE01000033
[OELE] metagenome; 1998
3347
3275
-
Phe
GAA
[ENA]
¢þ
>WENV181185189
OELE01000651
[OELE] metagenome; 1998
3386
3462
+
Pro
CGG
[ENA]
¢þ
>WENV181185155
OELE01000033
[OELE] metagenome; 1998
3496
3421
-
Ala
CGC
[ENA]
¢þ
>WENV181185154
OELE01000033
[OELE] metagenome; 1998
3571
3497
-
Ala
GGC
[ENA]
¢þ
>WENV181185204
OELE01001071
[OELE] metagenome; 1998
3651
3724
+
Gln
CTG
[ENA]
¢þ
>WENV181185205
OELE01001071
[OELE] metagenome; 1998
3778
3851
+
Gln
TTG
[ENA]
¢þ
>WENV181185191
OELE01000679
[OELE] metagenome; 1998
4121
4207
+
Leu
CAA
[ENA]
¢þ
>WENV181185223
OELE01001402
[OELE] metagenome; 1998
4168
4243
+
Lys
TTT
[ENA]
¢þ
>WENV181185180
OELE01000336
[OELE] metagenome; 1998
4548
4634
+
Leu
CAG
[ENA]
¢þ
>WENV181185181
OELE01000353
[OELE] metagenome; 1998
4863
4939
+
His
GTG
[ENA]
¢þ
>WENV181185153
OELE01000026
[OELE] metagenome; 1998
5308
5383
+
Thr
CGT
[ENA]
¢þ
>WENV181185187
OELE01000525
[OELE] metagenome; 1998
5648
5731
+
Leu
GAG
[ENA]
¢þ
>WENV181185195
OELE01000760
[OELE] metagenome; 1998
5889
5813
-
Pro
TGG
[ENA]
¢þ
>WENV181185151
OELE01000010
[OELE] metagenome; 1998
6429
6354
-
Trp
CCA
[ENA]
¢þ
>WENV181185198
OELE01000824
[OELE] metagenome; 1998
7341
7430
+
Ser
CGA
[ENA]
¢þ
>WENV181185178
OELE01000248
[OELE] metagenome; 1998
8439
8514
+
Cys
GCA
[ENA]
¢þ
>WENV181185152
OELE01000011
[OELE] metagenome; 1998
9439
9363
-
Ile2
CAT
[ENA]
¢þ
>WENV181185221
OELE01001340
[OELE] metagenome; 1998
12138
12064
-
Val
GAC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK