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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OELT] metagenome; 1998
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181185582
OELT01000519
[OELT] metagenome; 1998
5
80
+
Ala
GGC
[ENA]
¢þ
>WENV181185588
OELT01001137
[OELT] metagenome; 1998
71
144
+
Gln
TTG
[ENA]
¢þ
>WENV181185581
OELT01000410
[OELT] metagenome; 1998
73
1
-
Lys
TTT
[ENA]
¢þ
>WENV181185579
OELT01000080
[OELT] metagenome; 1998
75
2
-
Pro
TGG
[ENA]
¢þ
>WENV181185585
OELT01000865
[OELT] metagenome; 1998
190
263
+
Val
CAC
[ENA]
¢þ
>WENV181185589
OELT01001235
[OELT] metagenome; 1998
243
316
+
Ile
GAT
[ENA]
¢þ
>WENV181185583
OELT01000593
[OELT] metagenome; 1998
633
706
+
Gly
CCC
[ENA]
¢þ
>WENV181185591
OELT01001632
[OELT] metagenome; 1998
791
705
-
Leu
CAA
[ENA]
¢þ
>WENV181185586
OELT01000911
[OELT] metagenome; 1998
847
921
+
Asn
GTT
[ENA]
¢þ
>WENV181185584
OELT01000719
[OELT] metagenome; 1998
1052
968
-
Leu
CAG
[ENA]
¢þ
>WENV181185580
OELT01000081
[OELT] metagenome; 1998
1395
1319
-
Arg
CCT
[ENA]
¢þ
>WENV181185590
OELT01001632
[OELT] metagenome; 1998
1554
1629
+
Ala
GGC
[ENA]
¢þ
>WENV181185587
OELT01000918
[OELT] metagenome; 1998
5489
5405
-
Leu
TAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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