This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OEML] metagenome; 1998
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181186025
OEML01000350
[OEML] metagenome; 1998
104
28
-
Asp
GTC
[ENA]
¢þ
>WENV181186035
OEML01000418
[OEML] metagenome; 1998
108
34
-
Phe
GAA
[ENA]
¢þ
>WENV181186022
OEML01000212
[OEML] metagenome; 1998
186
270
+
Leu
TAG
[ENA]
¢þ
>WENV181186024
OEML01000350
[OEML] metagenome; 1998
252
178
-
Val
TAC
[ENA]
¢þ
>WENV181186036
OEML01000481
[OEML] metagenome; 1998
576
500
-
Pro
CGG
[ENA]
¢þ
>WENV181186037
OEML01000629
[OEML] metagenome; 1998
604
678
+
Gly
GCC
[ENA]
¢þ
>WENV181186050
OEML01001571
[OEML] metagenome; 1998
660
734
+
Gly
CCC
[ENA]
¢þ
>WENV181186023
OEML01000219
[OEML] metagenome; 1998
682
755
+
Gln
CTG
[ENA]
¢þ
>WENV181186049
OEML01001399
[OEML] metagenome; 1998
765
840
+
Thr
TGT
[ENA]
¢þ
>WENV181186038
OEML01000629
[OEML] metagenome; 1998
768
842
+
Cys
GCA
[ENA]
¢þ
>WENV181186051
OEML01001676
[OEML] metagenome; 1998
776
703
-
Gln
CTG
[ENA]
¢þ
>WENV181186021
OEML01000193
[OEML] metagenome; 1998
854
929
+
Lys
CTT
[ENA]
¢þ
>WENV181186034
OEML01000418
[OEML] metagenome; 1998
1067
993
-
Cys
GCA
[ENA]
¢þ
>WENV181186045
OEML01000930
[OEML] metagenome; 1998
1069
1143
+
Asn
GTT
[ENA]
¢þ
>WENV181186052
OEML01001689
[OEML] metagenome; 1998
1075
1160
+
Leu
TAA
[ENA]
¢þ
>WENV181186033
OEML01000418
[OEML] metagenome; 1998
1234
1160
-
Gly
TCC
[ENA]
¢þ
>WENV181186043
OEML01000881
[OEML] metagenome; 1998
1236
1162
-
Lys
TTT
[ENA]
¢þ
>WENV181186032
OEML01000418
[OEML] metagenome; 1998
1317
1242
-
Arg
TCG
[ENA]
¢þ
>WENV181186031
OEML01000418
[OEML] metagenome; 1998
1508
1432
-
Gly
GCC
[ENA]
¢þ
>WENV181186044
OEML01000896
[OEML] metagenome; 1998
1549
1475
-
Gln
TTG
[ENA]
¢þ
>WENV181186019
OEML01000067
[OEML] metagenome; 1998
1599
1688
+
Ser
TGA
[ENA]
¢þ
>WENV181186018
OEML01000054
[OEML] metagenome; 1998
1748
1674
-
Gln
TTG
[ENA]
¢þ
>WENV181186041
OEML01000840
[OEML] metagenome; 1998
1850
1758
-
Ser
GCT
[ENA]
¢þ
>WENV181186042
OEML01000875
[OEML] metagenome; 1998
1992
1894
-
SeC
TCA
[ENA]
¢þ
>WENV181186046
OEML01001021
[OEML] metagenome; 1998
2011
1935
-
Met
CAT
[ENA]
¢þ
>WENV181186020
OEML01000099
[OEML] metagenome; 1998
2317
2241
-
Arg
ACG
[ENA]
¢þ
>WENV181186053
OEML01001812
[OEML] metagenome; 1998
2942
3031
+
Ser
CGA
[ENA]
¢þ
>WENV181186017
OEML01000042
[OEML] metagenome; 1998
2983
2907
-
Glu
CTC
[ENA]
¢þ
>WENV181186030
OEML01000418
[OEML] metagenome; 1998
3125
3048
-
Lys
CTT
[ENA]
¢þ
>WENV181186039
OEML01000631
[OEML] metagenome; 1998
3148
3062
-
Leu
CAA
[ENA]
¢þ
>WENV181186054
OEML01001812
[OEML] metagenome; 1998
3151
3240
+
Ser
GGA
[ENA]
¢þ
>WENV181186029
OEML01000418
[OEML] metagenome; 1998
3250
3173
-
Asp
GTC
[ENA]
¢þ
>WENV181186016
OEML01000037
[OEML] metagenome; 1998
3293
3218
-
Ile2
CAT
[ENA]
¢þ
>WENV181186028
OEML01000418
[OEML] metagenome; 1998
3380
3305
-
His
GTG
[ENA]
¢þ
>WENV181186027
OEML01000418
[OEML] metagenome; 1998
3576
3500
-
Leu
CAA
[ENA]
¢þ
>WENV181186026
OEML01000418
[OEML] metagenome; 1998
3738
3659
-
Glu
TTC
[ENA]
¢þ
>WENV181186047
OEML01001173
[OEML] metagenome; 1998
4046
4121
+
Trp
CCA
[ENA]
¢þ
>WENV181186048
OEML01001173
[OEML] metagenome; 1998
4298
4381
+
Ser
GCT
[ENA]
¢þ
>WENV181186040
OEML01000693
[OEML] metagenome; 1998
4816
4741
-
Ala
CGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK