Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA gene List

[OFCY] metagenome; soil

HIT: 75 sequence(s).

Download Sequence
View ClustalW result

The reliable tRNA genes	All candidate tRNA genes

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
	>WENV181221772	OFCY01000139	[OFCY] metagenome; soil		88	165	+	Asp	GTC	[ENA]	◯
	>WENV181221763	OFCY01000061	[OFCY] metagenome; soil		135	62	-	Gly	CCC	[ENA]	◯
	>WENV181221777	OFCY01000220	[OFCY] metagenome; soil		297	375	+	Trp	CCA	[ENA]	◯
	>WENV181221797	OFCY01000588	[OFCY] metagenome; soil		303	379	+	Asp	GTC	[ENA]	◯
	>WENV181221778	OFCY01000220	[OFCY] metagenome; soil		377	453	+	Asn	GTT	[ENA]	◯
	>WENV181221779	OFCY01000220	[OFCY] metagenome; soil		530	605	+	Thr	TGT	[ENA]	◯
	>WENV181221805	OFCY01001440	[OFCY] metagenome; soil		535	461	-	Gly	GCC	[ENA]	◯
	>WENV181221780	OFCY01000220	[OFCY] metagenome; soil		606	679	+	Thr	GGT	[ENA]	◯
	>WENV181221736	OFCY01000004	[OFCY] metagenome; soil		615	691	+	Arg	ACG	[ENA]	◯
	>WENV181221802	OFCY01000894	[OFCY] metagenome; soil		705	621	-	Leu	TAA	[ENA]	◯
	>WENV181221792	OFCY01000402	[OFCY] metagenome; soil		739	811	+	Glu	TTC	[ENA]	◯
	>WENV181221798	OFCY01000589	[OFCY] metagenome; soil		791	719	-	fMet	CAT	[ENA]	◯
	>WENV181221781	OFCY01000220	[OFCY] metagenome; soil		811	884	+	Val	TAC	[ENA]	◯
	>WENV181221804	OFCY01001366	[OFCY] metagenome; soil		888	813	-	Gln	CTG	[ENA]	◯
	>WENV181221801	OFCY01000717	[OFCY] metagenome; soil		1042	968	-	Asp	GTC	[ENA]	◯
	>WENV181221803	OFCY01001366	[OFCY] metagenome; soil		1060	985	-	Glu	CTC	[ENA]	◯
	>WENV181221789	OFCY01000366	[OFCY] metagenome; soil		1082	1007	-	Ala	CGC	[ENA]	◯
	>WENV181221782	OFCY01000220	[OFCY] metagenome; soil		1123	1198	+	Pro	TGG	[ENA]	◯
	>WENV181221800	OFCY01000717	[OFCY] metagenome; soil		1224	1142	-	Leu	TAG	[ENA]	◯
	>WENV181221796	OFCY01000585	[OFCY] metagenome; soil		1275	1348	+	Asn	GTT	[ENA]	◯
	>WENV181221799	OFCY01000600	[OFCY] metagenome; soil		1282	1358	+	fMet	CAT	[ENA]	◯
	>WENV181221783	OFCY01000220	[OFCY] metagenome; soil		1326	1400	+	Arg	ACG	[ENA]	◯
	>WENV181221788	OFCY01000230	[OFCY] metagenome; soil		1499	1410	-	Ser	TGA	[ENA]	◯
	>WENV181221791	OFCY01000370	[OFCY] metagenome; soil		1535	1461	-	Arg	ACG	[ENA]	◯
	>WENV181221795	OFCY01000419	[OFCY] metagenome; soil		1622	1549	-	Gly	TCC	[ENA]	◯
	>WENV181221794	OFCY01000419	[OFCY] metagenome; soil		1764	1680	-	Tyr	GTA	[ENA]	◯
	>WENV181221790	OFCY01000370	[OFCY] metagenome; soil		1778	1707	-	Asp	GTC	[ENA]	◯
	>WENV181221773	OFCY01000139	[OFCY] metagenome; soil		1937	2013	+	Asp	GTC	[ENA]	◯
	>WENV181221793	OFCY01000419	[OFCY] metagenome; soil		1968	1895	-	Gly	TCC	[ENA]	◯
	>WENV181221784	OFCY01000220	[OFCY] metagenome; soil		2055	2129	+	Ala	TGC	[ENA]	◯
	>WENV181221785	OFCY01000220	[OFCY] metagenome; soil		2189	2262	+	Asp	GTC	[ENA]	◯
	>WENV181221786	OFCY01000220	[OFCY] metagenome; soil		2349	2423	+	Ile	GAT	[ENA]	◯
	>WENV181221739	OFCY01000007	[OFCY] metagenome; soil		2386	2470	+	Leu	GAG	[ENA]	◯
	>WENV181221787	OFCY01000220	[OFCY] metagenome; soil		2582	2655	+	Met	CAT	[ENA]	◯
	>WENV181221755	OFCY01000052	[OFCY] metagenome; soil		3154	3238	+	Leu	CAG	[ENA]	◯
	>WENV181221738	OFCY01000004	[OFCY] metagenome; soil		3504	3412	-	Ser	GCT	[ENA]	◯
	>WENV181221776	OFCY01000202	[OFCY] metagenome; soil		3536	3460	-	Ala	TGC	[ENA]	◯
	>WENV181221775	OFCY01000202	[OFCY] metagenome; soil		3629	3554	-	Ile	GAT	[ENA]	◯
	>WENV181221744	OFCY01000010	[OFCY] metagenome; soil		4142	4218	+	Arg	CCG	[ENA]	◯
	>WENV181221769	OFCY01000126	[OFCY] metagenome; soil		4626	4701	+	Gly	GCC	[ENA]	◯
	>WENV181221770	OFCY01000126	[OFCY] metagenome; soil		4792	4865	+	Cys	GCA	[ENA]	◯
	>WENV181221771	OFCY01000126	[OFCY] metagenome; soil		4962	5048	+	Leu	TAA	[ENA]	◯
	>WENV181221765	OFCY01000074	[OFCY] metagenome; soil		5544	5470	-	Glu	TTC	[ENA]	◯
	>WENV181221764	OFCY01000074	[OFCY] metagenome; soil		5677	5602	-	Ala	GGC	[ENA]	◯
	>WENV181221754	OFCY01000040	[OFCY] metagenome; soil		5980	5904	-	Pro	GGG	[ENA]	◯
	>WENV181221766	OFCY01000075	[OFCY] metagenome; soil		6494	6419	-	Lys	TTT	[ENA]	◯
	>WENV181221768	OFCY01000104	[OFCY] metagenome; soil		6677	6769	+	Ser	GGA	[ENA]	◯
	>WENV181221774	OFCY01000139	[OFCY] metagenome; soil		10270	10360	+	Ser	CGA	[ENA]	◯
	>WENV181221767	OFCY01000087	[OFCY] metagenome; soil		11051	10976	-	Phe	GAA	[ENA]	◯
	>WENV181221756	OFCY01000056	[OFCY] metagenome; soil		13412	13488	+	Pro	TGG	[ENA]	◯
	>WENV181221757	OFCY01000056	[OFCY] metagenome; soil		13532	13608	+	Arg	TCT	[ENA]	◯
	>WENV181221758	OFCY01000056	[OFCY] metagenome; soil		13652	13728	+	His	GTG	[ENA]	◯
	>WENV181221759	OFCY01000056	[OFCY] metagenome; soil		13803	13878	+	Lys	CTT	[ENA]	◯
	>WENV181221760	OFCY01000056	[OFCY] metagenome; soil		13965	14050	+	Leu	TAG	[ENA]	◯
	>WENV181221753	OFCY01000040	[OFCY] metagenome; soil		14847	14773	-	Val	GAC	[ENA]	◯
	>WENV181221747	OFCY01000019	[OFCY] metagenome; soil		17426	17350	-	Arg	CCT	[ENA]	◯
	>WENV181221748	OFCY01000021	[OFCY] metagenome; soil		17524	17449	-	Ile2	CAT	[ENA]	◯
	>WENV181221752	OFCY01000040	[OFCY] metagenome; soil		17830	17906	+	Asn	GTT	[ENA]	◯
	>WENV181221740	OFCY01000007	[OFCY] metagenome; soil		17859	17935	+	fMet	CAT	[ENA]	◯
	>WENV181221750	OFCY01000024	[OFCY] metagenome; soil		19185	19109	-	Ile	GAT	[ENA]	◯
	>WENV181221749	OFCY01000024	[OFCY] metagenome; soil		19276	19201	-	Ala	TGC	[ENA]	◯
	>WENV181221761	OFCY01000056	[OFCY] metagenome; soil		20808	20882	+	Val	TAC	[ENA]	◯
	>WENV181221762	OFCY01000056	[OFCY] metagenome; soil		20910	20986	+	Asp	GTC	[ENA]	◯
	>WENV181221745	OFCY01000015	[OFCY] metagenome; soil		34729	34655	-	Gln	CTG	[ENA]	◯
	>WENV181221746	OFCY01000019	[OFCY] metagenome; soil		34757	34683	-	Ala	CGC	[ENA]	◯
	>WENV181221751	OFCY01000027	[OFCY] metagenome; soil		34890	34817	-	Gly	CCC	[ENA]	◯
	>WENV181221737	OFCY01000004	[OFCY] metagenome; soil		38439	38364	-	Thr	CGT	[ENA]	◯
	>WENV181221742	OFCY01000008	[OFCY] metagenome; soil		40943	40867	-	Met	CAT	[ENA]	◯
	>WENV181221735	OFCY01000002	[OFCY] metagenome; soil		50447	50373	-	Glu	CTC	[ENA]	◯
	>WENV181221741	OFCY01000007	[OFCY] metagenome; soil		52425	52340	-	Leu	CAA	[ENA]	◯
	>WENV181221734	OFCY01000001	[OFCY] metagenome; soil		53522	53447	-	Trp	CCA	[ENA]	◯
	>WENV181221743	OFCY01000009	[OFCY] metagenome; soil		54213	54138	-	Thr	TGT	[ENA]	◯
	>WENV181221733	OFCY01000001	[OFCY] metagenome; soil		54932	54857	-	Thr	GGT	[ENA]	◯
	>WENV181221732	OFCY01000001	[OFCY] metagenome; soil		55182	55097	-	Tyr	GTA	[ENA]	◯
	>WENV181221731	OFCY01000001	[OFCY] metagenome; soil		58984	58909	-	Gln	TTG	[ENA]	◯
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence
View ClustalW result

BACK