This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OFPC] sediment metagenome; Lake sediment
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181364764
OFPC01002386
[OFPC] sediment metagenome; Lake sediment
47
120
+
Lys
CTT
[ENA]
¢þ
>WENV181364763
OFPC01002376
[OFPC] sediment metagenome; Lake sediment
114
189
+
His
GTG
[ENA]
¢þ
>WENV181364761
OFPC01001111
[OFPC] sediment metagenome; Lake sediment
147
68
-
Leu
TAG
[ENA]
¢þ
>WENV181364753
OFPC01000915
[OFPC] sediment metagenome; Lake sediment
222
296
+
Lys
CTT
[ENA]
¢þ
>WENV181364760
OFPC01001111
[OFPC] sediment metagenome; Lake sediment
231
156
-
Lys
TTT
[ENA]
¢þ
>WENV181364754
OFPC01000950
[OFPC] sediment metagenome; Lake sediment
267
343
+
Ile
GAT
[ENA]
¢þ
>WENV181364762
OFPC01002185
[OFPC] sediment metagenome; Lake sediment
269
345
+
Pro
GGG
[ENA]
¢þ
>WENV181364759
OFPC01001111
[OFPC] sediment metagenome; Lake sediment
329
245
-
Tyr
GTA
[ENA]
¢þ
>WENV181364752
OFPC01000834
[OFPC] sediment metagenome; Lake sediment
342
417
+
Ala
GGC
[ENA]
¢þ
>WENV181364749
OFPC01000268
[OFPC] sediment metagenome; Lake sediment
356
279
-
Arg
CCG
[ENA]
¢þ
>WENV181364755
OFPC01000950
[OFPC] sediment metagenome; Lake sediment
361
436
+
Ala
TGC
[ENA]
¢þ
>WENV181364758
OFPC01001111
[OFPC] sediment metagenome; Lake sediment
415
341
-
Phe
GAA
[ENA]
¢þ
>WENV181364748
OFPC01000221
[OFPC] sediment metagenome; Lake sediment
470
546
+
Pro
CGG
[ENA]
¢þ
>WENV181364757
OFPC01001111
[OFPC] sediment metagenome; Lake sediment
509
433
-
Asp
GTC
[ENA]
¢þ
>WENV181364751
OFPC01000799
[OFPC] sediment metagenome; Lake sediment
593
666
+
Gly
CCC
[ENA]
¢þ
>WENV181364756
OFPC01001111
[OFPC] sediment metagenome; Lake sediment
601
525
-
fMet
CAT
[ENA]
¢þ
>WENV181364747
OFPC01000104
[OFPC] sediment metagenome; Lake sediment
730
657
-
Gly
TCC
[ENA]
¢þ
>WENV181364750
OFPC01000312
[OFPC] sediment metagenome; Lake sediment
841
766
-
His
GTG
[ENA]
¢þ
>WENV181364746
OFPC01000104
[OFPC] sediment metagenome; Lake sediment
885
800
-
Tyr
GTA
[ENA]
¢þ
>WENV181364745
OFPC01000013
[OFPC] sediment metagenome; Lake sediment
3454
3379
-
Ala
TGC
[ENA]
¢þ
>WENV181364744
OFPC01000013
[OFPC] sediment metagenome; Lake sediment
3555
3479
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK