Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA gene List

[OFPG] sediment metagenome; Lake sediment

HIT: 68 sequence(s).

Download Sequence
View ClustalW result

The reliable tRNA genes	All candidate tRNA genes

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
	>WENV181364966	OFPG01001751	[OFPG] sediment metagenome; Lake sediment		1	77	+	Ile	GAT	[ENA]	◯
	>WENV181364969	OFPG01002279	[OFPG] sediment metagenome; Lake sediment		76	162	+	Leu	CAA	[ENA]	◯
	>WENV181364982	OFPG01006291	[OFPG] sediment metagenome; Lake sediment		91	165	+	Arg	CCT	[ENA]	◯
	>WENV181364967	OFPG01001751	[OFPG] sediment metagenome; Lake sediment		127	202	+	Ala	TGC	[ENA]	◯
	>WENV181364976	OFPG01003288	[OFPG] sediment metagenome; Lake sediment		165	239	+	Leu	TAA	[ENA]	◯
	>WENV181364971	OFPG01002906	[OFPG] sediment metagenome; Lake sediment		213	129	-	Leu	CAG	[ENA]	◯
	>WENV181364938	OFPG01000191	[OFPG] sediment metagenome; Lake sediment		233	157	-	Ile2	CAT	[ENA]	◯
	>WENV181364981	OFPG01005595	[OFPG] sediment metagenome; Lake sediment		290	220	-	Trp	CCA	[ENA]	◯
	>WENV181364952	OFPG01000408	[OFPG] sediment metagenome; Lake sediment		380	454	+	Arg	CCT	[ENA]	◯
	>WENV181364979	OFPG01003789	[OFPG] sediment metagenome; Lake sediment		387	461	+	Leu	CAA	[ENA]	◯
	>WENV181364983	OFPG01007164	[OFPG] sediment metagenome; Lake sediment		419	495	+	Ile2	CAT	[ENA]	◯
	>WENV181364978	OFPG01003529	[OFPG] sediment metagenome; Lake sediment		431	506	+	Lys	CTT	[ENA]	◯
	>WENV181364959	OFPG01000833	[OFPG] sediment metagenome; Lake sediment		481	555	+	Ile2	CAT	[ENA]	◯
	>WENV181364980	OFPG01005565	[OFPG] sediment metagenome; Lake sediment		487	403	-	Leu	CAG	[ENA]	◯
	>WENV181364973	OFPG01002954	[OFPG] sediment metagenome; Lake sediment		512	437	-	Glu	TTC	[ENA]	◯
	>WENV181364970	OFPG01002494	[OFPG] sediment metagenome; Lake sediment		539	464	-	Lys	TTT	[ENA]	◯
	>WENV181364977	OFPG01003301	[OFPG] sediment metagenome; Lake sediment		630	540	-	Ser	GGA	[ENA]	◯
	>WENV181364960	OFPG01000833	[OFPG] sediment metagenome; Lake sediment		645	723	+	Arg	TCT	[ENA]	◯
	>WENV181364968	OFPG01001916	[OFPG] sediment metagenome; Lake sediment		650	736	+	Leu	TAA	[ENA]	◯
	>WENV181364950	OFPG01000360	[OFPG] sediment metagenome; Lake sediment		665	737	+	Thr	TGT	[ENA]	◯
	>WENV181364972	OFPG01002954	[OFPG] sediment metagenome; Lake sediment		689	614	-	Ala	GGC	[ENA]	◯
	>WENV181364975	OFPG01003089	[OFPG] sediment metagenome; Lake sediment		695	622	-	Gly	TCC	[ENA]	◯
	>WENV181364940	OFPG01000202	[OFPG] sediment metagenome; Lake sediment		762	687	-	Gly	GCC	[ENA]	◯
	>WENV181364974	OFPG01003011	[OFPG] sediment metagenome; Lake sediment		795	720	-	Ala	CGC	[ENA]	◯
	>WENV181364962	OFPG01001415	[OFPG] sediment metagenome; Lake sediment		894	818	-	Pro	CGG	[ENA]	◯
	>WENV181364965	OFPG01001583	[OFPG] sediment metagenome; Lake sediment		918	843	-	Ala	TGC	[ENA]	◯
	>WENV181364964	OFPG01001583	[OFPG] sediment metagenome; Lake sediment		1021	945	-	Ile	GAT	[ENA]	◯
	>WENV181364963	OFPG01001510	[OFPG] sediment metagenome; Lake sediment		1095	1020	-	Phe	GAA	[ENA]	◯
	>WENV181364958	OFPG01000729	[OFPG] sediment metagenome; Lake sediment		1252	1178	-	Sup	TTA	[ENA]	◯
	>WENV181364961	OFPG01000833	[OFPG] sediment metagenome; Lake sediment		1337	1410	+	Pro	TGG	[ENA]	◯
	>WENV181364956	OFPG01000689	[OFPG] sediment metagenome; Lake sediment		1567	1475	-	Ser	GCT	[ENA]	◯
	>WENV181364957	OFPG01000695	[OFPG] sediment metagenome; Lake sediment		1635	1708	+	Gly	CCC	[ENA]	◯
	>WENV181364936	OFPG01000168	[OFPG] sediment metagenome; Lake sediment		1886	1970	+	Leu	CAA	[ENA]	◯
	>WENV181364939	OFPG01000201	[OFPG] sediment metagenome; Lake sediment		2063	1988	-	Asn	GTT	[ENA]	◯
	>WENV181364931	OFPG01000109	[OFPG] sediment metagenome; Lake sediment		2730	2806	+	Pro	GGG	[ENA]	◯
	>WENV181364916	OFPG01000002	[OFPG] sediment metagenome; Lake sediment		3049	3122	+	Ile2	CAT	[ENA]	◯
	>WENV181364946	OFPG01000283	[OFPG] sediment metagenome; Lake sediment		3124	3050	-	Leu	CAA	[ENA]	◯
	>WENV181364941	OFPG01000230	[OFPG] sediment metagenome; Lake sediment		3193	3268	+	His	GTG	[ENA]	◯
	>WENV181364955	OFPG01000463	[OFPG] sediment metagenome; Lake sediment		3214	3138	-	Asp	GTC	[ENA]	◯
	>WENV181364945	OFPG01000283	[OFPG] sediment metagenome; Lake sediment		3277	3202	-	Leu	CAG	[ENA]	◯
	>WENV181364933	OFPG01000116	[OFPG] sediment metagenome; Lake sediment		3331	3255	-	Arg	TCT	[ENA]	◯
	>WENV181364944	OFPG01000283	[OFPG] sediment metagenome; Lake sediment		3372	3300	-	Tyr	GTA	[ENA]	◯
	>WENV181364954	OFPG01000463	[OFPG] sediment metagenome; Lake sediment		3406	3331	-	Glu	TTC	[ENA]	◯
	>WENV181364932	OFPG01000116	[OFPG] sediment metagenome; Lake sediment		3429	3353	-	Pro	TGG	[ENA]	◯
	>WENV181364953	OFPG01000423	[OFPG] sediment metagenome; Lake sediment		3805	3730	-	Trp	CCA	[ENA]	◯
	>WENV181364942	OFPG01000236	[OFPG] sediment metagenome; Lake sediment		4045	4120	+	Lys	CTT	[ENA]	◯
	>WENV181364929	OFPG01000087	[OFPG] sediment metagenome; Lake sediment		4325	4400	+	Arg	CCG	[ENA]	◯
	>WENV181364951	OFPG01000374	[OFPG] sediment metagenome; Lake sediment		4327	4403	+	Gln	TTG	[ENA]	◯
	>WENV181364948	OFPG01000330	[OFPG] sediment metagenome; Lake sediment		4479	4564	+	Tyr	GTA	[ENA]	◯
	>WENV181364949	OFPG01000330	[OFPG] sediment metagenome; Lake sediment		4642	4715	+	Gly	TCC	[ENA]	◯
	>WENV181364943	OFPG01000237	[OFPG] sediment metagenome; Lake sediment		4920	4844	-	Met	CAT	[ENA]	◯
	>WENV181364947	OFPG01000299	[OFPG] sediment metagenome; Lake sediment		5230	5314	+	Leu	GAG	[ENA]	◯
	>WENV181364934	OFPG01000140	[OFPG] sediment metagenome; Lake sediment		5739	5663	-	Arg	ACG	[ENA]	◯
	>WENV181364937	OFPG01000190	[OFPG] sediment metagenome; Lake sediment		7425	7332	-	Leu	TAA	[ENA]	◯
	>WENV181364935	OFPG01000152	[OFPG] sediment metagenome; Lake sediment		7570	7483	-	Ser	TGA	[ENA]	◯
	>WENV181364930	OFPG01000104	[OFPG] sediment metagenome; Lake sediment		7877	7788	-	Ser	GGA	[ENA]	◯
	>WENV181364927	OFPG01000055	[OFPG] sediment metagenome; Lake sediment		8034	8118	+	Leu	CAG	[ENA]	◯
	>WENV181364926	OFPG01000046	[OFPG] sediment metagenome; Lake sediment		9365	9452	+	Ser	CGA	[ENA]	◯
	>WENV181364920	OFPG01000010	[OFPG] sediment metagenome; Lake sediment		10320	10245	-	Lys	TTT	[ENA]	◯
	>WENV181364928	OFPG01000055	[OFPG] sediment metagenome; Lake sediment		10404	10328	-	Val	GAC	[ENA]	◯
	>WENV181364918	OFPG01000009	[OFPG] sediment metagenome; Lake sediment		10745	10821	+	Pro	CGG	[ENA]	◯
	>WENV181364921	OFPG01000012	[OFPG] sediment metagenome; Lake sediment		12348	12423	+	Phe	GAA	[ENA]	◯
	>WENV181364925	OFPG01000020	[OFPG] sediment metagenome; Lake sediment		12897	12824	-	Pro	CGG	[ENA]	◯
	>WENV181364922	OFPG01000017	[OFPG] sediment metagenome; Lake sediment		12901	12977	+	fMet	CAT	[ENA]	◯
	>WENV181364924	OFPG01000020	[OFPG] sediment metagenome; Lake sediment		12983	12909	-	Gln	CTG	[ENA]	◯
	>WENV181364923	OFPG01000020	[OFPG] sediment metagenome; Lake sediment		17915	17985	+	Met	CAT	[ENA]	◯
	>WENV181364917	OFPG01000008	[OFPG] sediment metagenome; Lake sediment		19254	19180	-	Val	CAC	[ENA]	◯
	>WENV181364919	OFPG01000009	[OFPG] sediment metagenome; Lake sediment		23467	23392	-	Thr	TGT	[ENA]	◯
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence
View ClustalW result

BACK