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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OGCC] insect metagenome; haemolymph
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181405266
OGCC01018248
[OGCC] insect metagenome; haemolymph
50
124
+
Ala
GGC
[ENA]
¢þ
>WENV181405230
OGCC01000109
[OGCC] insect metagenome; haemolymph
79
152
+
Val
GAC
[ENA]
¢þ
>WENV181405239
OGCC01000448
[OGCC] insect metagenome; haemolymph
99
182
+
Leu
CAA
[ENA]
¢þ
>WENV181405254
OGCC01001864
[OGCC] insect metagenome; haemolymph
123
50
-
Ile
GAT
[ENA]
¢þ
>WENV181405253
OGCC01001857
[OGCC] insect metagenome; haemolymph
238
321
+
Leu
TAA
[ENA]
¢þ
>WENV181405237
OGCC01000406
[OGCC] insect metagenome; haemolymph
270
342
+
Glu
TTC
[ENA]
¢þ
>WENV181405250
OGCC01001690
[OGCC] insect metagenome; haemolymph
304
389
+
Leu
CAG
[ENA]
¢þ
>WENV181405252
OGCC01001847
[OGCC] insect metagenome; haemolymph
313
387
+
Gln
TTG
[ENA]
¢þ
>WENV181405268
OGCC01029792
[OGCC] insect metagenome; haemolymph
319
244
-
Glu
TTC
[ENA]
¢þ
>WENV181405258
OGCC01002380
[OGCC] insect metagenome; haemolymph
319
247
-
Asn
GTT
[ENA]
¢þ
>WENV181405267
OGCC01020224
[OGCC] insect metagenome; haemolymph
385
311
-
Arg
CCG
[ENA]
¢þ
>WENV181405261
OGCC01004421
[OGCC] insect metagenome; haemolymph
400
325
-
Arg
TCT
[ENA]
¢þ
>WENV181405245
OGCC01000949
[OGCC] insect metagenome; haemolymph
418
332
-
Leu
GAG
[ENA]
¢þ
>WENV181405264
OGCC01011297
[OGCC] insect metagenome; haemolymph
427
508
+
Tyr
GTA
[ENA]
¢þ
>WENV181405260
OGCC01003760
[OGCC] insect metagenome; haemolymph
460
532
+
Val
TAC
[ENA]
¢þ
>WENV181405265
OGCC01011297
[OGCC] insect metagenome; haemolymph
512
584
+
Gly
TCC
[ENA]
¢þ
>WENV181405238
OGCC01000406
[OGCC] insect metagenome; haemolymph
516
590
+
Arg
ACG
[ENA]
¢þ
>WENV181405262
OGCC01007052
[OGCC] insect metagenome; haemolymph
589
664
+
Arg
TCT
[ENA]
¢þ
>WENV181405246
OGCC01001059
[OGCC] insect metagenome; haemolymph
637
562
-
Val
GAC
[ENA]
¢þ
>WENV181405255
OGCC01001957
[OGCC] insect metagenome; haemolymph
666
739
+
Gly
GCC
[ENA]
¢þ
>WENV181405259
OGCC01003716
[OGCC] insect metagenome; haemolymph
678
751
+
Phe
GAA
[ENA]
¢þ
>WENV181405243
OGCC01000900
[OGCC] insect metagenome; haemolymph
722
798
+
Met
CAT
[ENA]
¢þ
>WENV181405256
OGCC01002001
[OGCC] insect metagenome; haemolymph
775
848
+
Thr
GGT
[ENA]
¢þ
>WENV181405263
OGCC01007290
[OGCC] insect metagenome; haemolymph
779
696
-
Leu
GAG
[ENA]
¢þ
>WENV181405231
OGCC01000110
[OGCC] insect metagenome; haemolymph
844
769
-
Thr
TGT
[ENA]
¢þ
>WENV181405257
OGCC01002076
[OGCC] insect metagenome; haemolymph
1060
1149
+
Ser
GGA
[ENA]
¢þ
>WENV181405247
OGCC01001172
[OGCC] insect metagenome; haemolymph
1074
998
-
Gly
GCC
[ENA]
¢þ
>WENV181405249
OGCC01001502
[OGCC] insect metagenome; haemolymph
1106
1182
+
fMet
CAT
[ENA]
¢þ
>WENV181405251
OGCC01001702
[OGCC] insect metagenome; haemolymph
1197
1269
+
Cys
GCA
[ENA]
¢þ
>WENV181405232
OGCC01000121
[OGCC] insect metagenome; haemolymph
1202
1278
+
Asp
GTC
[ENA]
¢þ
>WENV181405248
OGCC01001336
[OGCC] insect metagenome; haemolymph
1222
1298
+
Arg
CCT
[ENA]
¢þ
>WENV181405242
OGCC01000523
[OGCC] insect metagenome; haemolymph
1336
1263
-
Gln
TTG
[ENA]
¢þ
>WENV181405244
OGCC01000926
[OGCC] insect metagenome; haemolymph
1440
1533
+
Ser
GCT
[ENA]
¢þ
>WENV181405241
OGCC01000523
[OGCC] insect metagenome; haemolymph
1447
1364
-
Leu
TAG
[ENA]
¢þ
>WENV181405240
OGCC01000523
[OGCC] insect metagenome; haemolymph
1534
1458
-
Met
CAT
[ENA]
¢þ
>WENV181405234
OGCC01000261
[OGCC] insect metagenome; haemolymph
1589
1515
-
Met
CAT
[ENA]
¢þ
>WENV181405236
OGCC01000400
[OGCC] insect metagenome; haemolymph
1841
1769
-
Glu
TTC
[ENA]
¢þ
>WENV181405226
OGCC01000007
[OGCC] insect metagenome; haemolymph
2027
1942
-
Leu
TAA
[ENA]
¢þ
>WENV181405235
OGCC01000265
[OGCC] insect metagenome; haemolymph
2056
2129
+
Lys
TTT
[ENA]
¢þ
>WENV181405227
OGCC01000021
[OGCC] insect metagenome; haemolymph
2577
2652
+
Lys
CTT
[ENA]
¢þ
>WENV181405229
OGCC01000080
[OGCC] insect metagenome; haemolymph
3003
2920
-
Leu
TAG
[ENA]
¢þ
>WENV181405233
OGCC01000130
[OGCC] insect metagenome; haemolymph
3176
3100
-
Pro
TGG
[ENA]
¢þ
>WENV181405228
OGCC01000050
[OGCC] insect metagenome; haemolymph
4976
5051
+
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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