This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OGEY] metagenome; Human gut stool
HIT:
147 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181471816
OGEY01005158
[OGEY] metagenome; Human gut stool
1
86
+
Ser
TGA
[ENA]
¢þ
>WENV181471850
OGEY01009927
[OGEY] metagenome; Human gut stool
10
94
+
Tyr
GTA
[ENA]
¢þ
>WENV181471839
OGEY01007007
[OGEY] metagenome; Human gut stool
30
105
+
Thr
TGT
[ENA]
¢þ
>WENV181471814
OGEY01004900
[OGEY] metagenome; Human gut stool
33
108
+
Ala
GGC
[ENA]
¢þ
>WENV181471853
OGEY01010307
[OGEY] metagenome; Human gut stool
34
109
+
Asp
GTC
[ENA]
¢þ
>WENV181471811
OGEY01004510
[OGEY] metagenome; Human gut stool
54
130
+
Arg
ACG
[ENA]
¢þ
>WENV181471832
OGEY01006652
[OGEY] metagenome; Human gut stool
58
131
+
Lys
CTT
[ENA]
¢þ
>WENV181471865
OGEY01010957
[OGEY] metagenome; Human gut stool
61
131
+
Gly
TCC
[ENA]
¢þ
>WENV181471780
OGEY01001260
[OGEY] metagenome; Human gut stool
84
158
+
fMet
CAT
[ENA]
¢þ
>WENV181471831
OGEY01006583
[OGEY] metagenome; Human gut stool
88
13
-
Thr
GGT
[ENA]
¢þ
>WENV181471824
OGEY01005624
[OGEY] metagenome; Human gut stool
96
171
+
Ala
CGC
[ENA]
¢þ
>WENV181471735
OGEY01000106
[OGEY] metagenome; Human gut stool
100
24
-
Pro
GGG
[ENA]
¢þ
>WENV181471863
OGEY01010482
[OGEY] metagenome; Human gut stool
101
174
+
Gly
CCC
[ENA]
¢þ
>WENV181471848
OGEY01009893
[OGEY] metagenome; Human gut stool
104
34
-
Gly
TCC
[ENA]
¢þ
>WENV181471756
OGEY01000513
[OGEY] metagenome; Human gut stool
110
35
-
Lys
CTT
[ENA]
¢þ
>WENV181471866
OGEY01010957
[OGEY] metagenome; Human gut stool
136
210
+
Arg
TCT
[ENA]
¢þ
>WENV181471854
OGEY01010307
[OGEY] metagenome; Human gut stool
140
215
+
Val
TAC
[ENA]
¢þ
>WENV181471833
OGEY01006652
[OGEY] metagenome; Human gut stool
146
218
+
Glu
CTC
[ENA]
¢þ
>WENV181471840
OGEY01007007
[OGEY] metagenome; Human gut stool
157
241
+
Tyr
GTA
[ENA]
¢þ
>WENV181471858
OGEY01010314
[OGEY] metagenome; Human gut stool
159
231
+
Asn
GTT
[ENA]
¢þ
>WENV181471815
OGEY01004994
[OGEY] metagenome; Human gut stool
162
75
-
Ser
GCT
[ENA]
¢þ
>WENV181471835
OGEY01006842
[OGEY] metagenome; Human gut stool
165
240
+
Ala
TGC
[ENA]
¢þ
>WENV181471834
OGEY01006657
[OGEY] metagenome; Human gut stool
168
86
-
Leu
TAG
[ENA]
¢þ
>WENV181471873
OGEY01012345
[OGEY] metagenome; Human gut stool
169
94
-
Glu
TTC
[ENA]
¢þ
>WENV181471781
OGEY01001260
[OGEY] metagenome; Human gut stool
169
243
+
Phe
GAA
[ENA]
¢þ
>WENV181471843
OGEY01008418
[OGEY] metagenome; Human gut stool
170
245
+
Val
GAC
[ENA]
¢þ
>WENV181471808
OGEY01004074
[OGEY] metagenome; Human gut stool
178
250
+
Thr
GGT
[ENA]
¢þ
>WENV181471830
OGEY01006583
[OGEY] metagenome; Human gut stool
179
103
-
fMet
CAT
[ENA]
¢þ
>WENV181471847
OGEY01009893
[OGEY] metagenome; Human gut stool
186
111
-
Pro
TGG
[ENA]
¢þ
>WENV181471852
OGEY01010225
[OGEY] metagenome; Human gut stool
193
267
+
Glu
CTC
[ENA]
¢þ
>WENV181471757
OGEY01000520
[OGEY] metagenome; Human gut stool
195
119
-
Thr
TGT
[ENA]
¢þ
>WENV181471862
OGEY01010373
[OGEY] metagenome; Human gut stool
202
130
-
Glu
TTC
[ENA]
¢þ
>WENV181471759
OGEY01000571
[OGEY] metagenome; Human gut stool
206
132
-
Lys
TTT
[ENA]
¢þ
>WENV181471836
OGEY01006863
[OGEY] metagenome; Human gut stool
214
290
+
Met
CAT
[ENA]
¢þ
>WENV181471855
OGEY01010307
[OGEY] metagenome; Human gut stool
221
297
+
Asp
GTC
[ENA]
¢þ
>WENV181471732
OGEY01000036
[OGEY] metagenome; Human gut stool
225
301
+
Arg
CCT
[ENA]
¢þ
>WENV181471846
OGEY01008840
[OGEY] metagenome; Human gut stool
243
167
-
Arg
CCT
[ENA]
¢þ
>WENV181471872
OGEY01012216
[OGEY] metagenome; Human gut stool
243
328
+
Leu
CAG
[ENA]
¢þ
>WENV181471844
OGEY01008695
[OGEY] metagenome; Human gut stool
246
159
-
Ser
CGA
[ENA]
¢þ
>WENV181471842
OGEY01008323
[OGEY] metagenome; Human gut stool
248
172
-
Arg
CCG
[ENA]
¢þ
>WENV181471867
OGEY01010957
[OGEY] metagenome; Human gut stool
257
331
+
His
GTG
[ENA]
¢þ
>WENV181471813
OGEY01004782
[OGEY] metagenome; Human gut stool
269
195
-
Glu
CTC
[ENA]
¢þ
>WENV181471827
OGEY01006422
[OGEY] metagenome; Human gut stool
269
344
+
Ala
TGC
[ENA]
¢þ
>WENV181471859
OGEY01010314
[OGEY] metagenome; Human gut stool
274
345
+
Glu
TTC
[ENA]
¢þ
>WENV181471869
OGEY01011693
[OGEY] metagenome; Human gut stool
285
360
+
Pro
CGG
[ENA]
¢þ
>WENV181471776
OGEY01001140
[OGEY] metagenome; Human gut stool
293
368
+
Thr
CGT
[ENA]
¢þ
>WENV181471736
OGEY01000119
[OGEY] metagenome; Human gut stool
299
371
+
Gly
CCC
[ENA]
¢þ
>WENV181471874
OGEY01012407
[OGEY] metagenome; Human gut stool
299
383
+
Leu
CAA
[ENA]
¢þ
>WENV181471856
OGEY01010307
[OGEY] metagenome; Human gut stool
304
379
+
Phe
GAA
[ENA]
¢þ
>WENV181471818
OGEY01005204
[OGEY] metagenome; Human gut stool
310
386
+
Val
TAC
[ENA]
¢þ
>WENV181471746
OGEY01000388
[OGEY] metagenome; Human gut stool
325
399
+
Ala
GGC
[ENA]
¢þ
>WENV181471870
OGEY01011700
[OGEY] metagenome; Human gut stool
339
415
+
Met
CAT
[ENA]
¢þ
>WENV181471778
OGEY01001207
[OGEY] metagenome; Human gut stool
343
414
+
Gln
TTG
[ENA]
¢þ
>WENV181471864
OGEY01010565
[OGEY] metagenome; Human gut stool
345
417
+
Arg
CCT
[ENA]
¢þ
>WENV181471868
OGEY01010957
[OGEY] metagenome; Human gut stool
345
418
+
Gln
TTG
[ENA]
¢þ
>WENV181471828
OGEY01006422
[OGEY] metagenome; Human gut stool
348
424
+
Ile
GAT
[ENA]
¢þ
>WENV181471826
OGEY01005949
[OGEY] metagenome; Human gut stool
349
266
-
Leu
GAG
[ENA]
¢þ
>WENV181471829
OGEY01006548
[OGEY] metagenome; Human gut stool
357
431
+
Pro
GGG
[ENA]
¢þ
>WENV181471743
OGEY01000288
[OGEY] metagenome; Human gut stool
360
453
+
Ser
CGA
[ENA]
¢þ
>WENV181471823
OGEY01005422
[OGEY] metagenome; Human gut stool
364
438
+
Arg
TCT
[ENA]
¢þ
>WENV181471789
OGEY01001347
[OGEY] metagenome; Human gut stool
371
296
-
His
GTG
[ENA]
¢þ
>WENV181471860
OGEY01010314
[OGEY] metagenome; Human gut stool
376
447
+
Thr
TGT
[ENA]
¢þ
>WENV181471777
OGEY01001172
[OGEY] metagenome; Human gut stool
379
463
+
Leu
CAA
[ENA]
¢þ
>WENV181471837
OGEY01006863
[OGEY] metagenome; Human gut stool
382
456
+
Glu
TTC
[ENA]
¢þ
>WENV181471857
OGEY01010307
[OGEY] metagenome; Human gut stool
387
462
+
Gly
GCC
[ENA]
¢þ
>WENV181471819
OGEY01005204
[OGEY] metagenome; Human gut stool
397
473
+
Asp
GTC
[ENA]
¢þ
>WENV181471812
OGEY01004782
[OGEY] metagenome; Human gut stool
403
328
-
Lys
CTT
[ENA]
¢þ
>WENV181471825
OGEY01005834
[OGEY] metagenome; Human gut stool
404
475
+
Trp
CCA
[ENA]
¢þ
>WENV181471845
OGEY01008767
[OGEY] metagenome; Human gut stool
423
331
-
Ser
GGA
[ENA]
¢þ
>WENV181471861
OGEY01010314
[OGEY] metagenome; Human gut stool
451
526
+
Ile2
CAT
[ENA]
¢þ
>WENV181471871
OGEY01011817
[OGEY] metagenome; Human gut stool
459
384
-
Thr
GGT
[ENA]
¢þ
>WENV181471820
OGEY01005204
[OGEY] metagenome; Human gut stool
477
552
+
Phe
GAA
[ENA]
¢þ
>WENV181471851
OGEY01010135
[OGEY] metagenome; Human gut stool
490
416
-
Cys
GCA
[ENA]
¢þ
>WENV181471838
OGEY01006863
[OGEY] metagenome; Human gut stool
492
568
+
Val
CAC
[ENA]
¢þ
>WENV181471817
OGEY01005202
[OGEY] metagenome; Human gut stool
498
585
+
Ser
GGA
[ENA]
¢þ
>WENV181471804
OGEY01003568
[OGEY] metagenome; Human gut stool
510
586
+
Ile
GAT
[ENA]
¢þ
>WENV181471849
OGEY01009917
[OGEY] metagenome; Human gut stool
517
441
-
Pro
TGG
[ENA]
¢þ
>WENV181471786
OGEY01001283
[OGEY] metagenome; Human gut stool
526
451
-
Lys
TTT
[ENA]
¢þ
>WENV181471787
OGEY01001322
[OGEY] metagenome; Human gut stool
530
605
+
Ala
TGC
[ENA]
¢þ
>WENV181471841
OGEY01007236
[OGEY] metagenome; Human gut stool
542
617
+
Asn
GTT
[ENA]
¢þ
>WENV181471821
OGEY01005204
[OGEY] metagenome; Human gut stool
578
653
+
Gly
GCC
[ENA]
¢þ
>WENV181471810
OGEY01004314
[OGEY] metagenome; Human gut stool
580
665
+
Leu
CAA
[ENA]
¢þ
>WENV181471734
OGEY01000106
[OGEY] metagenome; Human gut stool
583
655
+
Glu
TTC
[ENA]
¢þ
>WENV181471807
OGEY01003806
[OGEY] metagenome; Human gut stool
597
522
-
fMet
CAT
[ENA]
¢þ
>WENV181471747
OGEY01000402
[OGEY] metagenome; Human gut stool
618
701
+
Tyr
GTA
[ENA]
¢þ
>WENV181471788
OGEY01001322
[OGEY] metagenome; Human gut stool
629
705
+
Ile
GAT
[ENA]
¢þ
>WENV181471794
OGEY01001713
[OGEY] metagenome; Human gut stool
633
709
+
Arg
CCG
[ENA]
¢þ
>WENV181471785
OGEY01001283
[OGEY] metagenome; Human gut stool
642
568
-
Gln
TTG
[ENA]
¢þ
>WENV181471769
OGEY01000797
[OGEY] metagenome; Human gut stool
672
599
-
Gly
CCC
[ENA]
¢þ
>WENV181471774
OGEY01001081
[OGEY] metagenome; Human gut stool
690
761
+
Gln
CTG
[ENA]
¢þ
>WENV181471822
OGEY01005204
[OGEY] metagenome; Human gut stool
692
766
+
Cys
GCA
[ENA]
¢þ
>WENV181471806
OGEY01003806
[OGEY] metagenome; Human gut stool
702
617
-
Leu
TAA
[ENA]
¢þ
>WENV181471797
OGEY01001796
[OGEY] metagenome; Human gut stool
724
650
-
Thr
TGT
[ENA]
¢þ
>WENV181471791
OGEY01001535
[OGEY] metagenome; Human gut stool
758
683
-
Lys
TTT
[ENA]
¢þ
>WENV181471771
OGEY01000913
[OGEY] metagenome; Human gut stool
759
847
+
Ser
GCT
[ENA]
¢þ
>WENV181471784
OGEY01001283
[OGEY] metagenome; Human gut stool
770
694
-
His
GTG
[ENA]
¢þ
>WENV181471809
OGEY01004263
[OGEY] metagenome; Human gut stool
806
731
-
Ala
TGC
[ENA]
¢þ
>WENV181471760
OGEY01000583
[OGEY] metagenome; Human gut stool
853
924
+
Gln
TTG
[ENA]
¢þ
>WENV181471792
OGEY01001560
[OGEY] metagenome; Human gut stool
854
927
+
fMet
CAT
[ENA]
¢þ
>WENV181471783
OGEY01001283
[OGEY] metagenome; Human gut stool
894
818
-
Arg
TCT
[ENA]
¢þ
>WENV181471803
OGEY01003527
[OGEY] metagenome; Human gut stool
930
846
-
Leu
TAG
[ENA]
¢þ
>WENV181471799
OGEY01002008
[OGEY] metagenome; Human gut stool
931
858
-
fMet
CAT
[ENA]
¢þ
>WENV181471805
OGEY01003639
[OGEY] metagenome; Human gut stool
944
869
-
Lys
CTT
[ENA]
¢þ
>WENV181471798
OGEY01001882
[OGEY] metagenome; Human gut stool
958
873
-
Ser
TGA
[ENA]
¢þ
>WENV181471782
OGEY01001283
[OGEY] metagenome; Human gut stool
978
904
-
Gly
TCC
[ENA]
¢þ
>WENV181471796
OGEY01001778
[OGEY] metagenome; Human gut stool
1000
1074
+
Ile2
CAT
[ENA]
¢þ
>WENV181471744
OGEY01000366
[OGEY] metagenome; Human gut stool
1022
1096
+
Met
CAT
[ENA]
¢þ
>WENV181471802
OGEY01002684
[OGEY] metagenome; Human gut stool
1052
977
-
Trp
CCA
[ENA]
¢þ
>WENV181471767
OGEY01000773
[OGEY] metagenome; Human gut stool
1055
1130
+
Lys
CTT
[ENA]
¢þ
>WENV181471800
OGEY01002049
[OGEY] metagenome; Human gut stool
1113
1036
-
Arg
CCT
[ENA]
¢þ
>WENV181471731
OGEY01000022
[OGEY] metagenome; Human gut stool
1117
1042
-
Pro
CGG
[ENA]
¢þ
>WENV181471729
OGEY01000012
[OGEY] metagenome; Human gut stool
1130
1214
+
Leu
CAG
[ENA]
¢þ
>WENV181471801
OGEY01002684
[OGEY] metagenome; Human gut stool
1164
1088
-
Ile2
CAT
[ENA]
¢þ
>WENV181471768
OGEY01000773
[OGEY] metagenome; Human gut stool
1176
1250
+
Glu
CTC
[ENA]
¢þ
>WENV181471790
OGEY01001404
[OGEY] metagenome; Human gut stool
1197
1270
+
Gln
CTG
[ENA]
¢þ
>WENV181471793
OGEY01001648
[OGEY] metagenome; Human gut stool
1232
1320
+
Ser
GGA
[ENA]
¢þ
>WENV181471730
OGEY01000022
[OGEY] metagenome; Human gut stool
1270
1195
-
Pro
TGG
[ENA]
¢þ
>WENV181471754
OGEY01000490
[OGEY] metagenome; Human gut stool
1273
1347
+
Asp
GTC
[ENA]
¢þ
>WENV181471749
OGEY01000408
[OGEY] metagenome; Human gut stool
1310
1219
-
Ser
GCT
[ENA]
¢þ
>WENV181471745
OGEY01000382
[OGEY] metagenome; Human gut stool
1373
1447
+
Ile2
CAT
[ENA]
¢þ
>WENV181471748
OGEY01000408
[OGEY] metagenome; Human gut stool
1413
1326
-
Ser
TGA
[ENA]
¢þ
>WENV181471795
OGEY01001758
[OGEY] metagenome; Human gut stool
1465
1389
-
Pro
GGG
[ENA]
¢þ
>WENV181471775
OGEY01001102
[OGEY] metagenome; Human gut stool
1548
1620
+
Cys
GCA
[ENA]
¢þ
>WENV181471779
OGEY01001239
[OGEY] metagenome; Human gut stool
1604
1678
+
Asn
GTT
[ENA]
¢þ
>WENV181471773
OGEY01001049
[OGEY] metagenome; Human gut stool
1623
1548
-
Pro
TGG
[ENA]
¢þ
>WENV181471738
OGEY01000145
[OGEY] metagenome; Human gut stool
1624
1696
+
Arg
CCT
[ENA]
¢þ
>WENV181471772
OGEY01000921
[OGEY] metagenome; Human gut stool
1686
1612
-
Met
CAT
[ENA]
¢þ
>WENV181471755
OGEY01000509
[OGEY] metagenome; Human gut stool
1710
1786
+
Ala
GGC
[ENA]
¢þ
>WENV181471758
OGEY01000568
[OGEY] metagenome; Human gut stool
1790
1715
-
Ala
GGC
[ENA]
¢þ
>WENV181471764
OGEY01000657
[OGEY] metagenome; Human gut stool
1870
1943
+
Phe
GAA
[ENA]
¢þ
>WENV181471770
OGEY01000809
[OGEY] metagenome; Human gut stool
1939
2014
+
Val
GAC
[ENA]
¢þ
>WENV181471765
OGEY01000665
[OGEY] metagenome; Human gut stool
1974
1901
-
Pro
CGG
[ENA]
¢þ
>WENV181471737
OGEY01000121
[OGEY] metagenome; Human gut stool
2079
2006
-
Gly
GCC
[ENA]
¢þ
>WENV181471762
OGEY01000606
[OGEY] metagenome; Human gut stool
2170
2096
-
Ala
TGC
[ENA]
¢þ
>WENV181471766
OGEY01000691
[OGEY] metagenome; Human gut stool
2171
2100
-
Cys
GCA
[ENA]
¢þ
>WENV181471740
OGEY01000220
[OGEY] metagenome; Human gut stool
2171
2248
+
Val
TAC
[ENA]
¢þ
>WENV181471763
OGEY01000638
[OGEY] metagenome; Human gut stool
2175
2249
+
Asp
GTC
[ENA]
¢þ
>WENV181471761
OGEY01000606
[OGEY] metagenome; Human gut stool
2261
2187
-
Ile
GAT
[ENA]
¢þ
>WENV181471750
OGEY01000420
[OGEY] metagenome; Human gut stool
2374
2460
+
Leu
GAG
[ENA]
¢þ
>WENV181471753
OGEY01000453
[OGEY] metagenome; Human gut stool
2378
2306
-
Thr
CGT
[ENA]
¢þ
>WENV181471739
OGEY01000201
[OGEY] metagenome; Human gut stool
2485
2562
+
Ile2
CAT
[ENA]
¢þ
>WENV181471751
OGEY01000420
[OGEY] metagenome; Human gut stool
2499
2586
+
Leu
CAG
[ENA]
¢þ
>WENV181471741
OGEY01000236
[OGEY] metagenome; Human gut stool
2560
2487
-
Trp
CCA
[ENA]
¢þ
>WENV181471742
OGEY01000254
[OGEY] metagenome; Human gut stool
2802
2715
-
Ser
CGA
[ENA]
¢þ
>WENV181471752
OGEY01000420
[OGEY] metagenome; Human gut stool
2915
2839
-
Pro
GGG
[ENA]
¢þ
>WENV181471733
OGEY01000071
[OGEY] metagenome; Human gut stool
3953
3867
-
Leu
TAA
[ENA]
¢þ
>WENV181471728
OGEY01000008
[OGEY] metagenome; Human gut stool
7582
7510
-
Arg
CCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK