This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHEA] human gut metagenome; feces
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182048368
OHEA01005249
[OHEA] human gut metagenome; feces
140
67
-
Trp
CCA
[ENA]
¢þ
>WENV182048363
OHEA01002439
[OHEA] human gut metagenome; feces
151
226
+
Pro
GGG
[ENA]
¢þ
>WENV182048361
OHEA01002276
[OHEA] human gut metagenome; feces
177
249
+
Asn
GTT
[ENA]
¢þ
>WENV182048366
OHEA01004168
[OHEA] human gut metagenome; feces
275
347
+
Arg
CCT
[ENA]
¢þ
>WENV182048369
OHEA01005745
[OHEA] human gut metagenome; feces
295
369
+
Ala
GGC
[ENA]
¢þ
>WENV182048360
OHEA01001610
[OHEA] human gut metagenome; feces
301
219
-
Leu
TAG
[ENA]
¢þ
>WENV182048362
OHEA01002276
[OHEA] human gut metagenome; feces
332
403
+
Cys
GCA
[ENA]
¢þ
>WENV182048352
OHEA01000190
[OHEA] human gut metagenome; feces
335
409
+
Thr
TGT
[ENA]
¢þ
>WENV182048365
OHEA01002855
[OHEA] human gut metagenome; feces
370
442
+
Glu
TTC
[ENA]
¢þ
>WENV182048364
OHEA01002502
[OHEA] human gut metagenome; feces
373
448
+
Pro
TGG
[ENA]
¢þ
>WENV182048367
OHEA01004953
[OHEA] human gut metagenome; feces
434
508
+
Arg
TCT
[ENA]
¢þ
>WENV182048358
OHEA01001167
[OHEA] human gut metagenome; feces
470
541
+
Gln
TTG
[ENA]
¢þ
>WENV182048353
OHEA01000305
[OHEA] human gut metagenome; feces
564
638
+
Ile2
CAT
[ENA]
¢þ
>WENV182048359
OHEA01001476
[OHEA] human gut metagenome; feces
566
639
+
Lys
TTT
[ENA]
¢þ
>WENV182048354
OHEA01000705
[OHEA] human gut metagenome; feces
633
721
+
Ser
GGA
[ENA]
¢þ
>WENV182048356
OHEA01001057
[OHEA] human gut metagenome; feces
714
787
+
Phe
GAA
[ENA]
¢þ
>WENV182048357
OHEA01001057
[OHEA] human gut metagenome; feces
800
873
+
Pro
CGG
[ENA]
¢þ
>WENV182048355
OHEA01000913
[OHEA] human gut metagenome; feces
1059
974
-
Ser
TGA
[ENA]
¢þ
>WENV182048351
OHEA01000137
[OHEA] human gut metagenome; feces
1409
1337
-
Thr
GGT
[ENA]
¢þ
>WENV182048350
OHEA01000137
[OHEA] human gut metagenome; feces
1583
1500
-
Tyr
GTA
[ENA]
¢þ
>WENV182048349
OHEA01000100
[OHEA] human gut metagenome; feces
1637
1553
-
Leu
TAA
[ENA]
¢þ
>WENV182048346
OHEA01000043
[OHEA] human gut metagenome; feces
1665
1739
+
Ile
GAT
[ENA]
¢þ
>WENV182048348
OHEA01000100
[OHEA] human gut metagenome; feces
1726
1653
-
Gly
GCC
[ENA]
¢þ
>WENV182048347
OHEA01000043
[OHEA] human gut metagenome; feces
1756
1830
+
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK