This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHID] human gut metagenome; feces
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182105782
OHID01003030
[OHID] human gut metagenome; feces
64
138
+
Gly
CCC
[ENA]
¢þ
>WENV182105775
OHID01002143
[OHID] human gut metagenome; feces
91
19
-
Arg
CCT
[ENA]
¢þ
>WENV182105790
OHID01004201
[OHID] human gut metagenome; feces
94
169
+
Asn
GTT
[ENA]
¢þ
>WENV182105792
OHID01004480
[OHID] human gut metagenome; feces
106
20
-
Leu
CAA
[ENA]
¢þ
>WENV182105779
OHID01002486
[OHID] human gut metagenome; feces
143
59
-
Leu
CAA
[ENA]
¢þ
>WENV182105772
OHID01001960
[OHID] human gut metagenome; feces
146
64
-
Leu
CAG
[ENA]
¢þ
>WENV182105791
OHID01004440
[OHID] human gut metagenome; feces
160
73
-
Ser
GCT
[ENA]
¢þ
>WENV182105773
OHID01002140
[OHID] human gut metagenome; feces
169
94
-
Pro
TGG
[ENA]
¢þ
>WENV182105757
OHID01000287
[OHID] human gut metagenome; feces
182
109
-
Lys
TTT
[ENA]
¢þ
>WENV182105778
OHID01002450
[OHID] human gut metagenome; feces
195
270
+
Thr
GGT
[ENA]
¢þ
>WENV182105785
OHID01003153
[OHID] human gut metagenome; feces
200
285
+
Tyr
GTA
[ENA]
¢þ
>WENV182105788
OHID01003293
[OHID] human gut metagenome; feces
231
313
+
Leu
TAG
[ENA]
¢þ
>WENV182105771
OHID01001960
[OHID] human gut metagenome; feces
248
175
-
Gly
GCC
[ENA]
¢þ
>WENV182105764
OHID01000887
[OHID] human gut metagenome; feces
302
216
-
Leu
CAG
[ENA]
¢þ
>WENV182105770
OHID01001557
[OHID] human gut metagenome; feces
318
244
-
Glu
TTC
[ENA]
¢þ
>WENV182105765
OHID01000943
[OHID] human gut metagenome; feces
345
428
+
Tyr
GTA
[ENA]
¢þ
>WENV182105786
OHID01003183
[OHID] human gut metagenome; feces
353
425
+
Arg
CCG
[ENA]
¢þ
>WENV182105777
OHID01002147
[OHID] human gut metagenome; feces
384
311
-
Pro
CGG
[ENA]
¢þ
>WENV182105784
OHID01003103
[OHID] human gut metagenome; feces
387
312
-
Gln
CTG
[ENA]
¢þ
>WENV182105789
OHID01003998
[OHID] human gut metagenome; feces
388
461
+
fMet
CAT
[ENA]
¢þ
>WENV182105768
OHID01001319
[OHID] human gut metagenome; feces
437
511
+
Ile2
CAT
[ENA]
¢þ
>WENV182105766
OHID01000943
[OHID] human gut metagenome; feces
444
516
+
Thr
GGT
[ENA]
¢þ
>WENV182105756
OHID01000248
[OHID] human gut metagenome; feces
448
373
-
Lys
CTT
[ENA]
¢þ
>WENV182105774
OHID01002141
[OHID] human gut metagenome; feces
467
396
-
Gln
CTG
[ENA]
¢þ
>WENV182105752
OHID01000084
[OHID] human gut metagenome; feces
489
574
+
Ser
TGA
[ENA]
¢þ
>WENV182105780
OHID01002523
[OHID] human gut metagenome; feces
500
425
-
Pro
GGG
[ENA]
¢þ
>WENV182105787
OHID01003218
[OHID] human gut metagenome; feces
503
429
-
Asp
GTC
[ENA]
¢þ
>WENV182105783
OHID01003035
[OHID] human gut metagenome; feces
533
459
-
His
GTG
[ENA]
¢þ
>WENV182105776
OHID01002147
[OHID] human gut metagenome; feces
547
620
+
Phe
GAA
[ENA]
¢þ
>WENV182105781
OHID01002571
[OHID] human gut metagenome; feces
592
506
-
Leu
CAG
[ENA]
¢þ
>WENV182105769
OHID01001500
[OHID] human gut metagenome; feces
605
693
+
Ser
TGA
[ENA]
¢þ
>WENV182105754
OHID01000128
[OHID] human gut metagenome; feces
686
612
-
Ala
TGC
[ENA]
¢þ
>WENV182105763
OHID01000887
[OHID] human gut metagenome; feces
689
603
-
Leu
GAG
[ENA]
¢þ
>WENV182105758
OHID01000461
[OHID] human gut metagenome; feces
710
635
-
Pro
TGG
[ENA]
¢þ
>WENV182105761
OHID01000540
[OHID] human gut metagenome; feces
731
657
-
Ala
GGC
[ENA]
¢þ
>WENV182105753
OHID01000128
[OHID] human gut metagenome; feces
844
767
-
Ile
GAT
[ENA]
¢þ
>WENV182105767
OHID01001153
[OHID] human gut metagenome; feces
846
774
-
Glu
TTC
[ENA]
¢þ
>WENV182105762
OHID01000741
[OHID] human gut metagenome; feces
873
798
-
Ala
TGC
[ENA]
¢þ
>WENV182105760
OHID01000525
[OHID] human gut metagenome; feces
948
860
-
Ser
CGA
[ENA]
¢þ
>WENV182105759
OHID01000519
[OHID] human gut metagenome; feces
1122
1046
-
Ile
GAT
[ENA]
¢þ
>WENV182105755
OHID01000222
[OHID] human gut metagenome; feces
1605
1532
-
Trp
CCA
[ENA]
¢þ
>WENV182105751
OHID01000061
[OHID] human gut metagenome; feces
2805
2734
-
Gln
TTG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK