This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHKM] human gut metagenome; feces
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182137968
OHKM01000903
[OHKM] human gut metagenome; feces
99
25
-
Ile2
CAT
[ENA]
¢þ
>WENV182137962
OHKM01000344
[OHKM] human gut metagenome; feces
113
41
-
Thr
GGT
[ENA]
¢þ
>WENV182137951
OHKM01000020
[OHKM] human gut metagenome; feces
132
217
+
Ser
TGA
[ENA]
¢þ
>WENV182137963
OHKM01000361
[OHKM] human gut metagenome; feces
207
291
+
Leu
CAA
[ENA]
¢þ
>WENV182137957
OHKM01000305
[OHKM] human gut metagenome; feces
219
293
+
fMet
CAT
[ENA]
¢þ
>WENV182137967
OHKM01000708
[OHKM] human gut metagenome; feces
221
295
+
Ala
GGC
[ENA]
¢þ
>WENV182137965
OHKM01000538
[OHKM] human gut metagenome; feces
228
153
-
Pro
CGG
[ENA]
¢þ
>WENV182137955
OHKM01000111
[OHKM] human gut metagenome; feces
296
372
+
Val
TAC
[ENA]
¢þ
>WENV182137956
OHKM01000112
[OHKM] human gut metagenome; feces
306
380
+
Ala
TGC
[ENA]
¢þ
>WENV182137961
OHKM01000344
[OHKM] human gut metagenome; feces
371
288
-
Tyr
GTA
[ENA]
¢þ
>WENV182137966
OHKM01000558
[OHKM] human gut metagenome; feces
403
477
+
Glu
CTC
[ENA]
¢þ
>WENV182137964
OHKM01000496
[OHKM] human gut metagenome; feces
407
334
-
Trp
CCA
[ENA]
¢þ
>WENV182137958
OHKM01000305
[OHKM] human gut metagenome; feces
469
540
+
Gly
GCC
[ENA]
¢þ
>WENV182137954
OHKM01000092
[OHKM] human gut metagenome; feces
482
398
-
Leu
GAG
[ENA]
¢þ
>WENV182137959
OHKM01000305
[OHKM] human gut metagenome; feces
547
633
+
Leu
TAA
[ENA]
¢þ
>WENV182137960
OHKM01000344
[OHKM] human gut metagenome; feces
562
488
-
Thr
TGT
[ENA]
¢þ
>WENV182137953
OHKM01000092
[OHKM] human gut metagenome; feces
574
501
-
Gly
GCC
[ENA]
¢þ
>WENV182137952
OHKM01000022
[OHKM] human gut metagenome; feces
1634
1560
-
Thr
TGT
[ENA]
¢þ
>WENV182137949
OHKM01000002
[OHKM] human gut metagenome; feces
2669
2743
+
Ile
GAT
[ENA]
¢þ
>WENV182137950
OHKM01000002
[OHKM] human gut metagenome; feces
2760
2834
+
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK