This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHMM] human gut metagenome; feces
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182164171
OHMM01001066
[OHMM] human gut metagenome; feces
76
3
-
Lys
TTT
[ENA]
¢þ
>WENV182164195
OHMM01003698
[OHMM] human gut metagenome; feces
118
194
+
Met
CAT
[ENA]
¢þ
>WENV182164190
OHMM01002389
[OHMM] human gut metagenome; feces
132
47
-
Tyr
GTA
[ENA]
¢þ
>WENV182164183
OHMM01001915
[OHMM] human gut metagenome; feces
174
101
-
Trp
CCA
[ENA]
¢þ
>WENV182164201
OHMM01004862
[OHMM] human gut metagenome; feces
230
304
+
Ile
GAT
[ENA]
¢þ
>WENV182164198
OHMM01004139
[OHMM] human gut metagenome; feces
246
322
+
Arg
CCT
[ENA]
¢þ
>WENV182164166
OHMM01000724
[OHMM] human gut metagenome; feces
273
346
+
Thr
CGT
[ENA]
¢þ
>WENV182164196
OHMM01003698
[OHMM] human gut metagenome; feces
286
357
+
Glu
TTC
[ENA]
¢þ
>WENV182164197
OHMM01003732
[OHMM] human gut metagenome; feces
346
271
-
Pro
TGG
[ENA]
¢þ
>WENV182164157
OHMM01000074
[OHMM] human gut metagenome; feces
378
452
+
Ile2
CAT
[ENA]
¢þ
>WENV182164202
OHMM01004862
[OHMM] human gut metagenome; feces
378
452
+
Ala
TGC
[ENA]
¢þ
>WENV182164193
OHMM01002874
[OHMM] human gut metagenome; feces
382
457
+
Val
GAC
[ENA]
¢þ
>WENV182164185
OHMM01002156
[OHMM] human gut metagenome; feces
426
501
+
Pro
TGG
[ENA]
¢þ
>WENV182164200
OHMM01004791
[OHMM] human gut metagenome; feces
435
509
+
Glu
CTC
[ENA]
¢þ
>WENV182164164
OHMM01000520
[OHMM] human gut metagenome; feces
468
386
-
Leu
TAG
[ENA]
¢þ
>WENV182164199
OHMM01004767
[OHMM] human gut metagenome; feces
472
400
-
Glu
CTC
[ENA]
¢þ
>WENV182164192
OHMM01002776
[OHMM] human gut metagenome; feces
491
567
+
Thr
TGT
[ENA]
¢þ
>WENV182164175
OHMM01001365
[OHMM] human gut metagenome; feces
498
426
-
Thr
GGT
[ENA]
¢þ
>WENV182164186
OHMM01002156
[OHMM] human gut metagenome; feces
507
577
+
Gly
TCC
[ENA]
¢þ
>WENV182164194
OHMM01003280
[OHMM] human gut metagenome; feces
560
486
-
Arg
TCT
[ENA]
¢þ
>WENV182164174
OHMM01001365
[OHMM] human gut metagenome; feces
598
515
-
Tyr
GTA
[ENA]
¢þ
>WENV182164191
OHMM01002643
[OHMM] human gut metagenome; feces
665
591
-
Ala
TGC
[ENA]
¢þ
>WENV182164176
OHMM01001414
[OHMM] human gut metagenome; feces
678
605
-
Lys
CTT
[ENA]
¢þ
>WENV182164182
OHMM01001857
[OHMM] human gut metagenome; feces
697
623
-
His
GTG
[ENA]
¢þ
>WENV182164187
OHMM01002156
[OHMM] human gut metagenome; feces
711
785
+
His
GTG
[ENA]
¢þ
>WENV182164180
OHMM01001727
[OHMM] human gut metagenome; feces
717
642
-
Val
TAC
[ENA]
¢þ
>WENV182164161
OHMM01000231
[OHMM] human gut metagenome; feces
734
808
+
Asp
GTC
[ENA]
¢þ
>WENV182164184
OHMM01002113
[OHMM] human gut metagenome; feces
755
828
+
fMet
CAT
[ENA]
¢þ
>WENV182164189
OHMM01002264
[OHMM] human gut metagenome; feces
757
839
+
Leu
CAA
[ENA]
¢þ
>WENV182164188
OHMM01002156
[OHMM] human gut metagenome; feces
794
867
+
Gln
TTG
[ENA]
¢þ
>WENV182164181
OHMM01001785
[OHMM] human gut metagenome; feces
831
740
-
Ser
CGA
[ENA]
¢þ
>WENV182164172
OHMM01001268
[OHMM] human gut metagenome; feces
839
764
-
Pro
TGG
[ENA]
¢þ
>WENV182164179
OHMM01001712
[OHMM] human gut metagenome; feces
852
926
+
Pro
GGG
[ENA]
¢þ
>WENV182164177
OHMM01001417
[OHMM] human gut metagenome; feces
995
920
-
Gly
CCC
[ENA]
¢þ
>WENV182164173
OHMM01001295
[OHMM] human gut metagenome; feces
1030
1114
+
Leu
CAA
[ENA]
¢þ
>WENV182164170
OHMM01001000
[OHMM] human gut metagenome; feces
1124
1039
-
Ser
TGA
[ENA]
¢þ
>WENV182164178
OHMM01001600
[OHMM] human gut metagenome; feces
1163
1090
-
Lys
CTT
[ENA]
¢þ
>WENV182164165
OHMM01000592
[OHMM] human gut metagenome; feces
1254
1180
-
Ala
GGC
[ENA]
¢þ
>WENV182164167
OHMM01000851
[OHMM] human gut metagenome; feces
1257
1330
+
Phe
GAA
[ENA]
¢þ
>WENV182164168
OHMM01000851
[OHMM] human gut metagenome; feces
1345
1418
+
Pro
CGG
[ENA]
¢þ
>WENV182164169
OHMM01000875
[OHMM] human gut metagenome; feces
1667
1739
+
Cys
GCA
[ENA]
¢þ
>WENV182164163
OHMM01000413
[OHMM] human gut metagenome; feces
2173
2097
-
Ile
GAT
[ENA]
¢þ
>WENV182164162
OHMM01000413
[OHMM] human gut metagenome; feces
2252
2177
-
Ala
TGC
[ENA]
¢þ
>WENV182164160
OHMM01000200
[OHMM] human gut metagenome; feces
2352
2426
+
Met
CAT
[ENA]
¢þ
>WENV182164159
OHMM01000128
[OHMM] human gut metagenome; feces
3336
3263
-
Lys
TTT
[ENA]
¢þ
>WENV182164158
OHMM01000075
[OHMM] human gut metagenome; feces
3495
3567
+
Glu
TTC
[ENA]
¢þ
>WENV182164156
OHMM01000018
[OHMM] human gut metagenome; feces
5658
5729
+
Gln
CTG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK