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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
[OHQU] human gut metagenome; feces
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182222026
OHQU01000563
[OHQU] human gut metagenome; feces
37
110
+
Gly
TCC
[ENA]
¢þ
>WENV182222025
OHQU01000523
[OHQU] human gut metagenome; feces
76
162
+
Leu
CAG
[ENA]
¢þ
>WENV182222020
OHQU01000306
[OHQU] human gut metagenome; feces
90
166
+
Met
CAT
[ENA]
¢þ
>WENV182222023
OHQU01000346
[OHQU] human gut metagenome; feces
212
138
-
Pro
TGG
[ENA]
¢þ
>WENV182222021
OHQU01000306
[OHQU] human gut metagenome; feces
258
332
+
Glu
CTC
[ENA]
¢þ
>WENV182222022
OHQU01000346
[OHQU] human gut metagenome; feces
316
243
-
Trp
CCA
[ENA]
¢þ
>WENV182222024
OHQU01000466
[OHQU] human gut metagenome; feces
362
437
+
Gly
GCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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