This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OIBD] human gut metagenome; feces
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182349818
OIBD01000058
[OIBD] human gut metagenome; feces
168
95
-
Ala
TGC
[ENA]
¢þ
>WENV182349817
OIBD01000058
[OIBD] human gut metagenome; feces
250
175
-
Ile
GAT
[ENA]
¢þ
>WENV182349819
OIBD01000263
[OIBD] human gut metagenome; feces
323
251
-
Arg
CCT
[ENA]
¢þ
>WENV182349820
OIBD01000675
[OIBD] human gut metagenome; feces
330
401
+
Gln
TTG
[ENA]
¢þ
>WENV182349816
OIBD01000058
[OIBD] human gut metagenome; feces
360
285
-
Ala
TGC
[ENA]
¢þ
>WENV182349811
OIBD01000004
[OIBD] human gut metagenome; feces
5368
5443
+
Asp
GTC
[ENA]
¢þ
>WENV182349812
OIBD01000004
[OIBD] human gut metagenome; feces
5449
5522
+
Val
TAC
[ENA]
¢þ
>WENV182349813
OIBD01000004
[OIBD] human gut metagenome; feces
5542
5614
+
Thr
TGT
[ENA]
¢þ
>WENV182349814
OIBD01000004
[OIBD] human gut metagenome; feces
5636
5710
+
fMet
CAT
[ENA]
¢þ
>WENV182349815
OIBD01000004
[OIBD] human gut metagenome; feces
5800
5892
+
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK