This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OIHV] human gut metagenome; human gut
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182427448
OIHV01004614
[OIHV] human gut metagenome; human gut
3
89
+
Leu
CAG
[ENA]
¢þ
>WENV182427436
OIHV01004125
[OIHV] human gut metagenome; human gut
17
106
+
Ser
GCT
[ENA]
¢þ
>WENV182427437
OIHV01004152
[OIHV] human gut metagenome; human gut
28
114
+
Leu
TAA
[ENA]
¢þ
>WENV182427397
OIHV01001890
[OIHV] human gut metagenome; human gut
64
136
+
Thr
GGT
[ENA]
¢þ
>WENV182427452
OIHV01005287
[OIHV] human gut metagenome; human gut
70
145
+
His
GTG
[ENA]
¢þ
>WENV182427468
OIHV01006142
[OIHV] human gut metagenome; human gut
74
1
-
Glu
TTC
[ENA]
¢þ
>WENV182427430
OIHV01003750
[OIHV] human gut metagenome; human gut
77
1
-
Leu
TAA
[ENA]
¢þ
>WENV182427415
OIHV01003130
[OIHV] human gut metagenome; human gut
92
17
-
Pro
TGG
[ENA]
¢þ
>WENV182427462
OIHV01005464
[OIHV] human gut metagenome; human gut
104
28
-
Met
CAT
[ENA]
¢þ
>WENV182427432
OIHV01004045
[OIHV] human gut metagenome; human gut
117
191
+
Gln
TTG
[ENA]
¢þ
>WENV182427431
OIHV01003884
[OIHV] human gut metagenome; human gut
131
206
+
Ile2
CAT
[ENA]
¢þ
>WENV182427429
OIHV01003750
[OIHV] human gut metagenome; human gut
160
84
-
Leu
TAG
[ENA]
¢þ
>WENV182427453
OIHV01005342
[OIHV] human gut metagenome; human gut
170
242
+
Arg
CCT
[ENA]
¢þ
>WENV182427473
OIHV01006456
[OIHV] human gut metagenome; human gut
171
257
+
Leu
GAG
[ENA]
¢þ
>WENV182427457
OIHV01005462
[OIHV] human gut metagenome; human gut
176
263
+
Ser
GCT
[ENA]
¢þ
>WENV182427470
OIHV01006264
[OIHV] human gut metagenome; human gut
193
266
+
Trp
CCA
[ENA]
¢þ
>WENV182427414
OIHV01003130
[OIHV] human gut metagenome; human gut
203
128
-
Pro
TGG
[ENA]
¢þ
>WENV182427407
OIHV01002440
[OIHV] human gut metagenome; human gut
210
298
+
Ser
GGA
[ENA]
¢þ
>WENV182427447
OIHV01004572
[OIHV] human gut metagenome; human gut
230
304
+
His
GTG
[ENA]
¢þ
>WENV182427472
OIHV01006291
[OIHV] human gut metagenome; human gut
233
322
+
Ser
CGA
[ENA]
¢þ
>WENV182427467
OIHV01006142
[OIHV] human gut metagenome; human gut
238
164
-
Glu
CTC
[ENA]
¢þ
>WENV182427454
OIHV01005408
[OIHV] human gut metagenome; human gut
255
331
+
Met
CAT
[ENA]
¢þ
>WENV182427461
OIHV01005464
[OIHV] human gut metagenome; human gut
270
195
-
Val
TAC
[ENA]
¢þ
>WENV182427438
OIHV01004152
[OIHV] human gut metagenome; human gut
284
368
+
Leu
AAG
[ENA]
¢þ
>WENV182427466
OIHV01006142
[OIHV] human gut metagenome; human gut
312
239
-
Glu
TTC
[ENA]
¢þ
>WENV182427451
OIHV01005087
[OIHV] human gut metagenome; human gut
321
245
-
Val
GAC
[ENA]
¢þ
>WENV182427433
OIHV01004045
[OIHV] human gut metagenome; human gut
337
412
+
Thr
TGT
[ENA]
¢þ
>WENV182427443
OIHV01004211
[OIHV] human gut metagenome; human gut
338
413
+
Lys
TTT
[ENA]
¢þ
>WENV182427458
OIHV01005462
[OIHV] human gut metagenome; human gut
341
413
+
Glu
CTC
[ENA]
¢þ
>WENV182427455
OIHV01005408
[OIHV] human gut metagenome; human gut
342
426
+
Leu
TAG
[ENA]
¢þ
>WENV182427401
OIHV01001916
[OIHV] human gut metagenome; human gut
353
277
-
Arg
TCT
[ENA]
¢þ
>WENV182427460
OIHV01005464
[OIHV] human gut metagenome; human gut
354
278
-
Arg
ACG
[ENA]
¢þ
>WENV182427471
OIHV01006264
[OIHV] human gut metagenome; human gut
355
444
+
Ser
TGA
[ENA]
¢þ
>WENV182427417
OIHV01003250
[OIHV] human gut metagenome; human gut
366
291
-
Phe
GAA
[ENA]
¢þ
>WENV182427439
OIHV01004152
[OIHV] human gut metagenome; human gut
381
469
+
Leu
TAA
[ENA]
¢þ
>WENV182427422
OIHV01003363
[OIHV] human gut metagenome; human gut
385
301
-
Leu
CAA
[ENA]
¢þ
>WENV182427465
OIHV01006142
[OIHV] human gut metagenome; human gut
393
319
-
Glu
TTC
[ENA]
¢þ
>WENV182427428
OIHV01003750
[OIHV] human gut metagenome; human gut
409
325
-
Leu
CAA
[ENA]
¢þ
>WENV182427434
OIHV01004045
[OIHV] human gut metagenome; human gut
415
489
+
Met
CAT
[ENA]
¢þ
>WENV182427444
OIHV01004211
[OIHV] human gut metagenome; human gut
419
495
+
Lys
TTT
[ENA]
¢þ
>WENV182427446
OIHV01004521
[OIHV] human gut metagenome; human gut
429
342
-
Ser
GGA
[ENA]
¢þ
>WENV182427408
OIHV01002456
[OIHV] human gut metagenome; human gut
434
518
+
Leu
CAA
[ENA]
¢þ
>WENV182427459
OIHV01005464
[OIHV] human gut metagenome; human gut
435
361
-
Gly
TCC
[ENA]
¢þ
>WENV182427416
OIHV01003250
[OIHV] human gut metagenome; human gut
446
372
-
Gln
TTG
[ENA]
¢þ
>WENV182427456
OIHV01005408
[OIHV] human gut metagenome; human gut
450
524
+
Gln
TTG
[ENA]
¢þ
>WENV182427412
OIHV01003038
[OIHV] human gut metagenome; human gut
454
378
-
Pro
TGG
[ENA]
¢þ
>WENV182427440
OIHV01004152
[OIHV] human gut metagenome; human gut
481
567
+
Leu
AAG
[ENA]
¢þ
>WENV182427469
OIHV01006253
[OIHV] human gut metagenome; human gut
492
397
-
Ser
GCT
[ENA]
¢þ
>WENV182427427
OIHV01003750
[OIHV] human gut metagenome; human gut
501
415
-
Leu
TAA
[ENA]
¢þ
>WENV182427463
OIHV01005939
[OIHV] human gut metagenome; human gut
503
429
-
Arg
TCT
[ENA]
¢þ
>WENV182427450
OIHV01005087
[OIHV] human gut metagenome; human gut
512
439
-
Gly
GCC
[ENA]
¢þ
>WENV182427464
OIHV01005958
[OIHV] human gut metagenome; human gut
532
457
-
Phe
GAA
[ENA]
¢þ
>WENV182427425
OIHV01003713
[OIHV] human gut metagenome; human gut
534
458
-
Arg
TCT
[ENA]
¢þ
>WENV182427411
OIHV01003038
[OIHV] human gut metagenome; human gut
536
459
-
Pro
GGG
[ENA]
¢þ
>WENV182427441
OIHV01004152
[OIHV] human gut metagenome; human gut
568
652
+
Leu
CAG
[ENA]
¢þ
>WENV182427410
OIHV01002720
[OIHV] human gut metagenome; human gut
569
642
+
Gly
GCC
[ENA]
¢þ
>WENV182427435
OIHV01004045
[OIHV] human gut metagenome; human gut
570
644
+
Arg
CCT
[ENA]
¢þ
>WENV182427445
OIHV01004211
[OIHV] human gut metagenome; human gut
585
660
+
Lys
CTT
[ENA]
¢þ
>WENV182427449
OIHV01005087
[OIHV] human gut metagenome; human gut
589
513
-
Met
CAT
[ENA]
¢þ
>WENV182427424
OIHV01003713
[OIHV] human gut metagenome; human gut
624
548
-
Arg
TCG
[ENA]
¢þ
>WENV182427442
OIHV01004152
[OIHV] human gut metagenome; human gut
666
749
+
Leu
AAG
[ENA]
¢þ
>WENV182427426
OIHV01003749
[OIHV] human gut metagenome; human gut
677
749
+
Glu
TTC
[ENA]
¢þ
>WENV182427413
OIHV01003121
[OIHV] human gut metagenome; human gut
688
616
-
Cys
GCA
[ENA]
¢þ
>WENV182427419
OIHV01003313
[OIHV] human gut metagenome; human gut
692
616
-
Val
GAC
[ENA]
¢þ
>WENV182427423
OIHV01003713
[OIHV] human gut metagenome; human gut
707
632
-
Ile2
CAT
[ENA]
¢þ
>WENV182427404
OIHV01002267
[OIHV] human gut metagenome; human gut
729
804
+
Asn
GTT
[ENA]
¢þ
>WENV182427418
OIHV01003313
[OIHV] human gut metagenome; human gut
773
697
-
Val
GAC
[ENA]
¢þ
>WENV182427421
OIHV01003324
[OIHV] human gut metagenome; human gut
776
701
-
Trp
CCA
[ENA]
¢þ
>WENV182427405
OIHV01002394
[OIHV] human gut metagenome; human gut
813
887
+
Asn
GTT
[ENA]
¢þ
>WENV182427387
OIHV01000493
[OIHV] human gut metagenome; human gut
826
902
+
Met
CAT
[ENA]
¢þ
>WENV182427420
OIHV01003324
[OIHV] human gut metagenome; human gut
861
785
-
Asp
GTC
[ENA]
¢þ
>WENV182427400
OIHV01001916
[OIHV] human gut metagenome; human gut
864
778
-
Leu
TAA
[ENA]
¢þ
>WENV182427406
OIHV01002421
[OIHV] human gut metagenome; human gut
892
965
+
fMet
CAT
[ENA]
¢þ
>WENV182427389
OIHV01000538
[OIHV] human gut metagenome; human gut
984
890
-
SeC
TCA
[ENA]
¢þ
>WENV182427399
OIHV01001916
[OIHV] human gut metagenome; human gut
1024
949
-
Ile2
CAT
[ENA]
¢þ
>WENV182427409
OIHV01002561
[OIHV] human gut metagenome; human gut
1028
1103
+
Gly
GCC
[ENA]
¢þ
>WENV182427402
OIHV01001990
[OIHV] human gut metagenome; human gut
1148
1224
+
Pro
GGG
[ENA]
¢þ
>WENV182427403
OIHV01002264
[OIHV] human gut metagenome; human gut
1212
1138
-
Gln
CTG
[ENA]
¢þ
>WENV182427396
OIHV01001209
[OIHV] human gut metagenome; human gut
1212
1285
+
Gly
CCC
[ENA]
¢þ
>WENV182427398
OIHV01001916
[OIHV] human gut metagenome; human gut
1301
1226
-
Ile
GAT
[ENA]
¢þ
>WENV182427380
OIHV01000273
[OIHV] human gut metagenome; human gut
1563
1488
-
Lys
TTT
[ENA]
¢þ
>WENV182427382
OIHV01000386
[OIHV] human gut metagenome; human gut
1618
1544
-
Ala
TGC
[ENA]
¢þ
>WENV182427379
OIHV01000273
[OIHV] human gut metagenome; human gut
1641
1566
-
Val
TAC
[ENA]
¢þ
>WENV182427388
OIHV01000511
[OIHV] human gut metagenome; human gut
1670
1743
+
Trp
CCA
[ENA]
¢þ
>WENV182427395
OIHV01001012
[OIHV] human gut metagenome; human gut
1690
1763
+
Gly
CCC
[ENA]
¢þ
>WENV182427381
OIHV01000386
[OIHV] human gut metagenome; human gut
1723
1647
-
Ile
GAT
[ENA]
¢þ
>WENV182427376
OIHV01000137
[OIHV] human gut metagenome; human gut
1774
1849
+
Glu
TTC
[ENA]
¢þ
>WENV182427393
OIHV01000864
[OIHV] human gut metagenome; human gut
2042
2118
+
Arg
CCG
[ENA]
¢þ
>WENV182427391
OIHV01000678
[OIHV] human gut metagenome; human gut
2101
2174
+
Lys
CTT
[ENA]
¢þ
>WENV182427394
OIHV01000864
[OIHV] human gut metagenome; human gut
2177
2252
+
His
GTG
[ENA]
¢þ
>WENV182427371
OIHV01000032
[OIHV] human gut metagenome; human gut
2368
2452
+
Leu
CAA
[ENA]
¢þ
>WENV182427392
OIHV01000780
[OIHV] human gut metagenome; human gut
2398
2324
-
Asp
GTC
[ENA]
¢þ
>WENV182427390
OIHV01000644
[OIHV] human gut metagenome; human gut
2419
2345
-
Ile2
CAT
[ENA]
¢þ
>WENV182427386
OIHV01000446
[OIHV] human gut metagenome; human gut
2584
2501
-
Tyr
GTA
[ENA]
¢þ
>WENV182427385
OIHV01000446
[OIHV] human gut metagenome; human gut
2673
2590
-
Tyr
GTA
[ENA]
¢þ
>WENV182427384
OIHV01000446
[OIHV] human gut metagenome; human gut
2761
2679
-
Tyr
GTA
[ENA]
¢þ
>WENV182427375
OIHV01000135
[OIHV] human gut metagenome; human gut
2813
2738
-
Val
TAC
[ENA]
¢þ
>WENV182427383
OIHV01000446
[OIHV] human gut metagenome; human gut
2861
2776
-
Tyr
GTA
[ENA]
¢þ
>WENV182427377
OIHV01000261
[OIHV] human gut metagenome; human gut
3026
3099
+
Lys
TTT
[ENA]
¢þ
>WENV182427378
OIHV01000272
[OIHV] human gut metagenome; human gut
3512
3583
+
Gln
TTG
[ENA]
¢þ
>WENV182427373
OIHV01000121
[OIHV] human gut metagenome; human gut
4622
4695
+
Phe
GAA
[ENA]
¢þ
>WENV182427374
OIHV01000121
[OIHV] human gut metagenome; human gut
4707
4780
+
Pro
CGG
[ENA]
¢þ
>WENV182427372
OIHV01000034
[OIHV] human gut metagenome; human gut
7489
7404
-
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK