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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OIJS] human gut metagenome; human gut
HIT:
144 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182439414
OIJS01001291
[OIJS] human gut metagenome; human gut
1
76
+
Ile2
CAT
[ENA]
¢þ
>WENV182439436
OIJS01003431
[OIJS] human gut metagenome; human gut
35
110
+
fMet
CAT
[ENA]
¢þ
>WENV182439466
OIJS01009739
[OIJS] human gut metagenome; human gut
55
130
+
Pro
TGG
[ENA]
¢þ
>WENV182439370
OIJS01000107
[OIJS] human gut metagenome; human gut
73
155
+
Leu
CAG
[ENA]
¢þ
>WENV182439422
OIJS01001538
[OIJS] human gut metagenome; human gut
76
3
-
Gln
CTG
[ENA]
¢þ
>WENV182439418
OIJS01001350
[OIJS] human gut metagenome; human gut
83
156
+
Pro
CGG
[ENA]
¢þ
>WENV182439427
OIJS01002211
[OIJS] human gut metagenome; human gut
111
184
+
Gly
CCC
[ENA]
¢þ
>WENV182439437
OIJS01003431
[OIJS] human gut metagenome; human gut
115
189
+
Phe
GAA
[ENA]
¢þ
>WENV182439450
OIJS01004203
[OIJS] human gut metagenome; human gut
120
46
-
Val
TAC
[ENA]
¢þ
>WENV182439423
OIJS01001613
[OIJS] human gut metagenome; human gut
143
69
-
Ala
GGC
[ENA]
¢þ
>WENV182439463
OIJS01008537
[OIJS] human gut metagenome; human gut
144
66
-
His
GTG
[ENA]
¢þ
>WENV182439458
OIJS01007387
[OIJS] human gut metagenome; human gut
149
77
-
Thr
GGT
[ENA]
¢þ
>WENV182439456
OIJS01006622
[OIJS] human gut metagenome; human gut
159
234
+
Ala
TGC
[ENA]
¢þ
>WENV182439371
OIJS01000107
[OIJS] human gut metagenome; human gut
170
243
+
Gly
GCC
[ENA]
¢þ
>WENV182439445
OIJS01004061
[OIJS] human gut metagenome; human gut
178
103
-
Trp
CCA
[ENA]
¢þ
>WENV182439382
OIJS01000230
[OIJS] human gut metagenome; human gut
181
88
-
Ser
GCT
[ENA]
¢þ
>WENV182439452
OIJS01004526
[OIJS] human gut metagenome; human gut
181
105
-
Ile
GAT
[ENA]
¢þ
>WENV182439459
OIJS01007412
[OIJS] human gut metagenome; human gut
183
258
+
Pro
CGG
[ENA]
¢þ
>WENV182439356
OIJS01000048
[OIJS] human gut metagenome; human gut
188
114
-
Met
CAT
[ENA]
¢þ
>WENV182439449
OIJS01004203
[OIJS] human gut metagenome; human gut
200
125
-
Asp
GTC
[ENA]
¢þ
>WENV182439377
OIJS01000187
[OIJS] human gut metagenome; human gut
200
127
-
Thr
CGT
[ENA]
¢þ
>WENV182439333
OIJS01000011
[OIJS] human gut metagenome; human gut
229
147
-
Leu
TAG
[ENA]
¢þ
>WENV182439457
OIJS01006622
[OIJS] human gut metagenome; human gut
238
314
+
Ile
GAT
[ENA]
¢þ
>WENV182439428
OIJS01002312
[OIJS] human gut metagenome; human gut
243
314
+
Gln
CTG
[ENA]
¢þ
>WENV182439438
OIJS01003431
[OIJS] human gut metagenome; human gut
247
317
+
Gly
TCC
[ENA]
¢þ
>WENV182439461
OIJS01007495
[OIJS] human gut metagenome; human gut
256
172
-
Leu
AAG
[ENA]
¢þ
>WENV182439451
OIJS01004526
[OIJS] human gut metagenome; human gut
261
186
-
Ala
TGC
[ENA]
¢þ
>WENV182439460
OIJS01007412
[OIJS] human gut metagenome; human gut
262
333
+
Glu
CTC
[ENA]
¢þ
>WENV182439381
OIJS01000230
[OIJS] human gut metagenome; human gut
301
214
-
Ser
TGA
[ENA]
¢þ
>WENV182439431
OIJS01002344
[OIJS] human gut metagenome; human gut
321
250
-
Cys
GCA
[ENA]
¢þ
>WENV182439439
OIJS01003431
[OIJS] human gut metagenome; human gut
321
394
+
Gly
GCC
[ENA]
¢þ
>WENV182439465
OIJS01009428
[OIJS] human gut metagenome; human gut
324
248
-
Ile
GAT
[ENA]
¢þ
>WENV182439448
OIJS01004203
[OIJS] human gut metagenome; human gut
337
262
-
Ile2
CAT
[ENA]
¢þ
>WENV182439444
OIJS01003894
[OIJS] human gut metagenome; human gut
339
266
-
Ala
TGC
[ENA]
¢þ
>WENV182439374
OIJS01000145
[OIJS] human gut metagenome; human gut
369
293
-
Arg
ACG
[ENA]
¢þ
>WENV182439454
OIJS01005130
[OIJS] human gut metagenome; human gut
394
319
-
Arg
CCT
[ENA]
¢þ
>WENV182439430
OIJS01002344
[OIJS] human gut metagenome; human gut
398
327
-
Glu
TTC
[ENA]
¢þ
>WENV182439464
OIJS01009428
[OIJS] human gut metagenome; human gut
404
329
-
Ala
TGC
[ENA]
¢þ
>WENV182439447
OIJS01004203
[OIJS] human gut metagenome; human gut
413
341
-
Thr
TGT
[ENA]
¢þ
>WENV182439399
OIJS01000651
[OIJS] human gut metagenome; human gut
419
343
-
His
GTG
[ENA]
¢þ
>WENV182439425
OIJS01001840
[OIJS] human gut metagenome; human gut
448
369
-
Leu
CAA
[ENA]
¢þ
>WENV182439417
OIJS01001347
[OIJS] human gut metagenome; human gut
457
374
-
Tyr
GTA
[ENA]
¢þ
>WENV182439404
OIJS01000710
[OIJS] human gut metagenome; human gut
464
538
+
Ile
GAT
[ENA]
¢þ
>WENV182439429
OIJS01002344
[OIJS] human gut metagenome; human gut
492
418
-
Asn
GTT
[ENA]
¢þ
>WENV182439398
OIJS01000651
[OIJS] human gut metagenome; human gut
502
427
-
Arg
TCT
[ENA]
¢þ
>WENV182439455
OIJS01006531
[OIJS] human gut metagenome; human gut
505
576
+
Gln
CTG
[ENA]
¢þ
>WENV182439443
OIJS01003894
[OIJS] human gut metagenome; human gut
507
432
-
Ile
GAT
[ENA]
¢þ
>WENV182439405
OIJS01000710
[OIJS] human gut metagenome; human gut
553
627
+
Ala
TGC
[ENA]
¢þ
>WENV182439407
OIJS01000726
[OIJS] human gut metagenome; human gut
561
476
-
Ser
TGA
[ENA]
¢þ
>WENV182439462
OIJS01008362
[OIJS] human gut metagenome; human gut
562
489
-
Lys
TTT
[ENA]
¢þ
>WENV182439434
OIJS01003236
[OIJS] human gut metagenome; human gut
578
649
+
Gln
TTG
[ENA]
¢þ
>WENV182439409
OIJS01000962
[OIJS] human gut metagenome; human gut
583
657
+
Pro
GGG
[ENA]
¢þ
>WENV182439426
OIJS01002142
[OIJS] human gut metagenome; human gut
596
687
+
Ser
GGA
[ENA]
¢þ
>WENV182439442
OIJS01003894
[OIJS] human gut metagenome; human gut
602
529
-
Ala
TGC
[ENA]
¢þ
>WENV182439446
OIJS01004203
[OIJS] human gut metagenome; human gut
612
537
-
Asn
GTT
[ENA]
¢þ
>WENV182439421
OIJS01001493
[OIJS] human gut metagenome; human gut
671
747
+
fMet
CAT
[ENA]
¢þ
>WENV182439441
OIJS01003703
[OIJS] human gut metagenome; human gut
687
612
-
Thr
CGT
[ENA]
¢þ
>WENV182439453
OIJS01005130
[OIJS] human gut metagenome; human gut
690
618
-
Thr
CGT
[ENA]
¢þ
>WENV182439413
OIJS01001283
[OIJS] human gut metagenome; human gut
813
889
+
Asn
GTT
[ENA]
¢þ
>WENV182439433
OIJS01003149
[OIJS] human gut metagenome; human gut
842
916
+
Thr
TGT
[ENA]
¢þ
>WENV182439325
OIJS01000001
[OIJS] human gut metagenome; human gut
864
790
-
His
GTG
[ENA]
¢þ
>WENV182439432
OIJS01003035
[OIJS] human gut metagenome; human gut
903
815
-
Ser
GGA
[ENA]
¢þ
>WENV182439440
OIJS01003669
[OIJS] human gut metagenome; human gut
923
849
-
Cys
GCA
[ENA]
¢þ
>WENV182439435
OIJS01003279
[OIJS] human gut metagenome; human gut
926
855
-
Gln
TTG
[ENA]
¢þ
>WENV182439406
OIJS01000719
[OIJS] human gut metagenome; human gut
1096
1177
+
Leu
TAG
[ENA]
¢þ
>WENV182439424
OIJS01001686
[OIJS] human gut metagenome; human gut
1099
1174
+
Pro
TGG
[ENA]
¢þ
>WENV182439420
OIJS01001457
[OIJS] human gut metagenome; human gut
1223
1140
-
Tyr
GTA
[ENA]
¢þ
>WENV182439403
OIJS01000690
[OIJS] human gut metagenome; human gut
1224
1151
-
Trp
CCA
[ENA]
¢þ
>WENV182439392
OIJS01000342
[OIJS] human gut metagenome; human gut
1272
1197
-
Ala
CGC
[ENA]
¢þ
>WENV182439419
OIJS01001439
[OIJS] human gut metagenome; human gut
1681
1767
+
Leu
CAG
[ENA]
¢þ
>WENV182439412
OIJS01001212
[OIJS] human gut metagenome; human gut
1845
1919
+
Gly
TCC
[ENA]
¢þ
>WENV182439416
OIJS01001333
[OIJS] human gut metagenome; human gut
1898
1969
+
Gln
CTG
[ENA]
¢þ
>WENV182439410
OIJS01001073
[OIJS] human gut metagenome; human gut
2069
1994
-
Val
GAC
[ENA]
¢þ
>WENV182439415
OIJS01001322
[OIJS] human gut metagenome; human gut
2106
2034
-
Glu
CTC
[ENA]
¢þ
>WENV182439411
OIJS01001124
[OIJS] human gut metagenome; human gut
2196
2269
+
fMet
CAT
[ENA]
¢þ
>WENV182439397
OIJS01000508
[OIJS] human gut metagenome; human gut
2340
2415
+
Gly
CCC
[ENA]
¢þ
>WENV182439395
OIJS01000376
[OIJS] human gut metagenome; human gut
2439
2522
+
Leu
GAG
[ENA]
¢þ
>WENV182439402
OIJS01000690
[OIJS] human gut metagenome; human gut
2584
2512
-
Thr
GGT
[ENA]
¢þ
>WENV182439346
OIJS01000022
[OIJS] human gut metagenome; human gut
2671
2598
-
Trp
CCA
[ENA]
¢þ
>WENV182439401
OIJS01000690
[OIJS] human gut metagenome; human gut
2683
2600
-
Tyr
GTA
[ENA]
¢þ
>WENV182439408
OIJS01000812
[OIJS] human gut metagenome; human gut
2826
2750
-
Arg
CCT
[ENA]
¢þ
>WENV182439400
OIJS01000690
[OIJS] human gut metagenome; human gut
2827
2753
-
Thr
TGT
[ENA]
¢þ
>WENV182439385
OIJS01000258
[OIJS] human gut metagenome; human gut
2898
2971
+
Lys
TTT
[ENA]
¢þ
>WENV182439393
OIJS01000363
[OIJS] human gut metagenome; human gut
3688
3764
+
Met
CAT
[ENA]
¢þ
>WENV182439394
OIJS01000363
[OIJS] human gut metagenome; human gut
3856
3927
+
Glu
TTC
[ENA]
¢þ
>WENV182439396
OIJS01000384
[OIJS] human gut metagenome; human gut
3887
3803
-
Tyr
GTA
[ENA]
¢þ
>WENV182439345
OIJS01000022
[OIJS] human gut metagenome; human gut
4037
3965
-
Thr
GGT
[ENA]
¢þ
>WENV182439344
OIJS01000022
[OIJS] human gut metagenome; human gut
4234
4151
-
Tyr
GTA
[ENA]
¢þ
>WENV182439343
OIJS01000022
[OIJS] human gut metagenome; human gut
4353
4279
-
Thr
TGT
[ENA]
¢þ
>WENV182439387
OIJS01000331
[OIJS] human gut metagenome; human gut
4657
4732
+
Phe
GAA
[ENA]
¢þ
>WENV182439388
OIJS01000331
[OIJS] human gut metagenome; human gut
4896
4971
+
Gly
GCC
[ENA]
¢þ
>WENV182439389
OIJS01000331
[OIJS] human gut metagenome; human gut
5001
5077
+
Asp
GTC
[ENA]
¢þ
>WENV182439390
OIJS01000331
[OIJS] human gut metagenome; human gut
5081
5156
+
Thr
GGT
[ENA]
¢þ
>WENV182439391
OIJS01000336
[OIJS] human gut metagenome; human gut
5279
5206
-
Glu
CTC
[ENA]
¢þ
>WENV182439386
OIJS01000264
[OIJS] human gut metagenome; human gut
7758
7834
+
Val
CAC
[ENA]
¢þ
>WENV182439380
OIJS01000229
[OIJS] human gut metagenome; human gut
7969
7893
-
Arg
CCG
[ENA]
¢þ
>WENV182439379
OIJS01000212
[OIJS] human gut metagenome; human gut
8084
7994
-
Ser
CGA
[ENA]
¢þ
>WENV182439383
OIJS01000245
[OIJS] human gut metagenome; human gut
8141
8215
+
Glu
CTC
[ENA]
¢þ
>WENV182439384
OIJS01000245
[OIJS] human gut metagenome; human gut
8219
8294
+
Lys
CTT
[ENA]
¢þ
>WENV182439360
OIJS01000062
[OIJS] human gut metagenome; human gut
8266
8338
+
Cys
GCA
[ENA]
¢þ
>WENV182439340
OIJS01000021
[OIJS] human gut metagenome; human gut
8424
8497
+
Thr
CGT
[ENA]
¢þ
>WENV182439353
OIJS01000044
[OIJS] human gut metagenome; human gut
8474
8402
-
Glu
TTC
[ENA]
¢þ
>WENV182439375
OIJS01000169
[OIJS] human gut metagenome; human gut
8782
8855
+
Gly
CCC
[ENA]
¢þ
>WENV182439351
OIJS01000043
[OIJS] human gut metagenome; human gut
8911
8838
-
fMet
CAT
[ENA]
¢þ
>WENV182439368
OIJS01000103
[OIJS] human gut metagenome; human gut
10620
10546
-
Glu
TTC
[ENA]
¢þ
>WENV182439366
OIJS01000090
[OIJS] human gut metagenome; human gut
10938
10865
-
Lys
CTT
[ENA]
¢þ
>WENV182439378
OIJS01000197
[OIJS] human gut metagenome; human gut
11493
11567
+
Met
CAT
[ENA]
¢þ
>WENV182439364
OIJS01000077
[OIJS] human gut metagenome; human gut
12045
11957
-
Ser
GGA
[ENA]
¢þ
>WENV182439376
OIJS01000183
[OIJS] human gut metagenome; human gut
13303
13229
-
Thr
TGT
[ENA]
¢þ
>WENV182439372
OIJS01000127
[OIJS] human gut metagenome; human gut
13846
13771
-
Pro
TGG
[ENA]
¢þ
>WENV182439341
OIJS01000022
[OIJS] human gut metagenome; human gut
17462
17536
+
Asn
GTT
[ENA]
¢þ
>WENV182439342
OIJS01000022
[OIJS] human gut metagenome; human gut
17560
17634
+
Asn
GTT
[ENA]
¢þ
>WENV182439367
OIJS01000102
[OIJS] human gut metagenome; human gut
19415
19489
+
Ala
GGC
[ENA]
¢þ
>WENV182439373
OIJS01000144
[OIJS] human gut metagenome; human gut
20424
20509
+
Ser
TGA
[ENA]
¢þ
>WENV182439336
OIJS01000013
[OIJS] human gut metagenome; human gut
21340
21252
-
Ser
GGA
[ENA]
¢þ
>WENV182439355
OIJS01000046
[OIJS] human gut metagenome; human gut
23018
23090
+
Glu
TTC
[ENA]
¢þ
>WENV182439354
OIJS01000045
[OIJS] human gut metagenome; human gut
29897
29971
+
Ala
GGC
[ENA]
¢þ
>WENV182439369
OIJS01000105
[OIJS] human gut metagenome; human gut
29911
29985
+
Thr
TGT
[ENA]
¢þ
>WENV182439358
OIJS01000059
[OIJS] human gut metagenome; human gut
30807
30881
+
Asp
GTC
[ENA]
¢þ
>WENV182439359
OIJS01000059
[OIJS] human gut metagenome; human gut
30913
30987
+
Asp
GTC
[ENA]
¢þ
>WENV182439365
OIJS01000087
[OIJS] human gut metagenome; human gut
31200
31126
-
Asp
GTC
[ENA]
¢þ
>WENV182439361
OIJS01000072
[OIJS] human gut metagenome; human gut
31328
31415
+
Ser
GCT
[ENA]
¢þ
>WENV182439362
OIJS01000072
[OIJS] human gut metagenome; human gut
31469
31541
+
Glu
CTC
[ENA]
¢þ
>WENV182439363
OIJS01000072
[OIJS] human gut metagenome; human gut
31557
31630
+
Lys
CTT
[ENA]
¢þ
>WENV182439357
OIJS01000049
[OIJS] human gut metagenome; human gut
35956
35882
-
Ile2
CAT
[ENA]
¢þ
>WENV182439330
OIJS01000008
[OIJS] human gut metagenome; human gut
38963
39037
+
Ile2
CAT
[ENA]
¢þ
>WENV182439327
OIJS01000004
[OIJS] human gut metagenome; human gut
42595
42683
+
Ser
GGA
[ENA]
¢þ
>WENV182439348
OIJS01000030
[OIJS] human gut metagenome; human gut
44763
44836
+
Trp
CCA
[ENA]
¢þ
>WENV182439335
OIJS01000013
[OIJS] human gut metagenome; human gut
45684
45613
-
Gln
CTG
[ENA]
¢þ
>WENV182439338
OIJS01000015
[OIJS] human gut metagenome; human gut
45928
45854
-
Arg
TCT
[ENA]
¢þ
>WENV182439329
OIJS01000006
[OIJS] human gut metagenome; human gut
49543
49470
-
Pro
CGG
[ENA]
¢þ
>WENV182439328
OIJS01000006
[OIJS] human gut metagenome; human gut
49725
49800
+
Phe
GAA
[ENA]
¢þ
>WENV182439339
OIJS01000018
[OIJS] human gut metagenome; human gut
54020
53946
-
Arg
TCT
[ENA]
¢þ
>WENV182439332
OIJS01000010
[OIJS] human gut metagenome; human gut
57892
57820
-
Arg
CCT
[ENA]
¢þ
>WENV182439350
OIJS01000035
[OIJS] human gut metagenome; human gut
58172
58254
+
Leu
TAG
[ENA]
¢þ
>WENV182439349
OIJS01000034
[OIJS] human gut metagenome; human gut
62591
62518
-
Phe
GAA
[ENA]
¢þ
>WENV182439352
OIJS01000044
[OIJS] human gut metagenome; human gut
63429
63513
+
Leu
CAA
[ENA]
¢þ
>WENV182439347
OIJS01000029
[OIJS] human gut metagenome; human gut
65996
65925
-
Gln
TTG
[ENA]
¢þ
>WENV182439324
OIJS01000001
[OIJS] human gut metagenome; human gut
69885
69800
-
Ser
TGA
[ENA]
¢þ
>WENV182439334
OIJS01000013
[OIJS] human gut metagenome; human gut
79473
79548
+
Pro
GGG
[ENA]
¢þ
>WENV182439323
OIJS01000001
[OIJS] human gut metagenome; human gut
83512
83585
+
Trp
CCA
[ENA]
¢þ
>WENV182439337
OIJS01000014
[OIJS] human gut metagenome; human gut
94310
94383
+
Lys
TTT
[ENA]
¢þ
>WENV182439331
OIJS01000008
[OIJS] human gut metagenome; human gut
98943
98872
-
Gln
TTG
[ENA]
¢þ
>WENV182439326
OIJS01000003
[OIJS] human gut metagenome; human gut
135317
135245
-
Arg
CCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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