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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OIJV] human gut metagenome; human gut
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182439679
OIJV01000297
[OIJV] human gut metagenome; human gut
2
88
+
Leu
AAG
[ENA]
¢þ
>WENV182439752
OIJV01009700
[OIJV] human gut metagenome; human gut
3
76
+
Gly
GCC
[ENA]
¢þ
>WENV182439682
OIJV01000310
[OIJV] human gut metagenome; human gut
31
103
+
Trp
CCA
[ENA]
¢þ
>WENV182439744
OIJV01007889
[OIJV] human gut metagenome; human gut
41
113
+
Pro
TGG
[ENA]
¢þ
>WENV182439728
OIJV01004727
[OIJV] human gut metagenome; human gut
57
131
+
Ala
GGC
[ENA]
¢þ
>WENV182439735
OIJV01006134
[OIJV] human gut metagenome; human gut
68
155
+
Ser
GCT
[ENA]
¢þ
>WENV182439740
OIJV01007462
[OIJV] human gut metagenome; human gut
73
146
+
fMet
CAT
[ENA]
¢þ
>WENV182439737
OIJV01006451
[OIJV] human gut metagenome; human gut
87
13
-
Ile2
CAT
[ENA]
¢þ
>WENV182439721
OIJV01004247
[OIJV] human gut metagenome; human gut
101
177
+
Arg
CCT
[ENA]
¢þ
>WENV182439725
OIJV01004715
[OIJV] human gut metagenome; human gut
106
177
+
Asn
GTT
[ENA]
¢þ
>WENV182439723
OIJV01004480
[OIJV] human gut metagenome; human gut
117
45
-
Arg
CCG
[ENA]
¢þ
>WENV182439757
OIJV01011827
[OIJV] human gut metagenome; human gut
132
59
-
Gln
TTG
[ENA]
¢þ
>WENV182439739
OIJV01007061
[OIJV] human gut metagenome; human gut
151
77
-
Glu
TTC
[ENA]
¢þ
>WENV182439742
OIJV01007649
[OIJV] human gut metagenome; human gut
153
79
-
Asn
GTT
[ENA]
¢þ
>WENV182439686
OIJV01000467
[OIJV] human gut metagenome; human gut
156
244
+
Ser
GGA
[ENA]
¢þ
>WENV182439749
OIJV01008934
[OIJV] human gut metagenome; human gut
169
252
+
Arg
GCG
[ENA]
¢þ
>WENV182439747
OIJV01008849
[OIJV] human gut metagenome; human gut
171
97
-
Thr
TGT
[ENA]
¢þ
>WENV182439726
OIJV01004715
[OIJV] human gut metagenome; human gut
192
263
+
Glu
TTC
[ENA]
¢þ
>WENV182439754
OIJV01010877
[OIJV] human gut metagenome; human gut
196
277
+
Leu
TAG
[ENA]
¢þ
>WENV182439753
OIJV01010510
[OIJV] human gut metagenome; human gut
199
274
+
His
GTG
[ENA]
¢þ
>WENV182439758
OIJV01011912
[OIJV] human gut metagenome; human gut
211
138
-
Ile2
CAT
[ENA]
¢þ
>WENV182439750
OIJV01009264
[OIJV] human gut metagenome; human gut
215
142
-
Gln
TTG
[ENA]
¢þ
>WENV182439695
OIJV01001305
[OIJV] human gut metagenome; human gut
234
307
+
Lys
CTT
[ENA]
¢þ
>WENV182439700
OIJV01001491
[OIJV] human gut metagenome; human gut
242
171
-
Glu
TTC
[ENA]
¢þ
>WENV182439738
OIJV01006756
[OIJV] human gut metagenome; human gut
261
332
+
Gln
TTG
[ENA]
¢þ
>WENV182439755
OIJV01010976
[OIJV] human gut metagenome; human gut
270
345
+
Pro
TGG
[ENA]
¢þ
>WENV182439701
OIJV01001551
[OIJV] human gut metagenome; human gut
272
347
+
fMet
CAT
[ENA]
¢þ
>WENV182439715
OIJV01002700
[OIJV] human gut metagenome; human gut
293
368
+
Pro
GGG
[ENA]
¢þ
>WENV182439727
OIJV01004715
[OIJV] human gut metagenome; human gut
308
380
+
Thr
TGT
[ENA]
¢þ
>WENV182439756
OIJV01011121
[OIJV] human gut metagenome; human gut
309
235
-
Ala
GGC
[ENA]
¢þ
>WENV182439702
OIJV01001551
[OIJV] human gut metagenome; human gut
350
424
+
Phe
GAA
[ENA]
¢þ
>WENV182439724
OIJV01004501
[OIJV] human gut metagenome; human gut
367
287
-
Leu
TAG
[ENA]
¢þ
>WENV182439734
OIJV01005461
[OIJV] human gut metagenome; human gut
385
462
+
Arg
CCT
[ENA]
¢þ
>WENV182439751
OIJV01009484
[OIJV] human gut metagenome; human gut
389
298
-
Ser
GGA
[ENA]
¢þ
>WENV182439743
OIJV01007833
[OIJV] human gut metagenome; human gut
402
477
+
Thr
CGT
[ENA]
¢þ
>WENV182439720
OIJV01004226
[OIJV] human gut metagenome; human gut
408
483
+
Gly
CCC
[ENA]
¢þ
>WENV182439699
OIJV01001491
[OIJV] human gut metagenome; human gut
410
334
-
Met
CAT
[ENA]
¢þ
>WENV182439674
OIJV01000147
[OIJV] human gut metagenome; human gut
414
488
+
Glu
CTC
[ENA]
¢þ
>WENV182439703
OIJV01001551
[OIJV] human gut metagenome; human gut
459
529
+
Gly
TCC
[ENA]
¢þ
>WENV182439713
OIJV01002041
[OIJV] human gut metagenome; human gut
485
409
-
Arg
ACG
[ENA]
¢þ
>WENV182439675
OIJV01000147
[OIJV] human gut metagenome; human gut
492
567
+
Lys
CTT
[ENA]
¢þ
>WENV182439748
OIJV01008859
[OIJV] human gut metagenome; human gut
496
572
+
Arg
TCT
[ENA]
¢þ
>WENV182439667
OIJV01000052
[OIJV] human gut metagenome; human gut
500
575
+
Val
GAC
[ENA]
¢þ
>WENV182439714
OIJV01002688
[OIJV] human gut metagenome; human gut
502
420
-
Leu
TAG
[ENA]
¢þ
>WENV182439736
OIJV01006134
[OIJV] human gut metagenome; human gut
510
584
+
Glu
CTC
[ENA]
¢þ
>WENV182439733
OIJV01005146
[OIJV] human gut metagenome; human gut
521
447
-
Asp
GTC
[ENA]
¢þ
>WENV182439704
OIJV01001551
[OIJV] human gut metagenome; human gut
549
624
+
Arg
TCT
[ENA]
¢þ
>WENV182439746
OIJV01008206
[OIJV] human gut metagenome; human gut
559
484
-
Thr
GGT
[ENA]
¢þ
>WENV182439692
OIJV01000962
[OIJV] human gut metagenome; human gut
604
532
-
Cys
GCA
[ENA]
¢þ
>WENV182439741
OIJV01007516
[OIJV] human gut metagenome; human gut
604
676
+
Ala
GGC
[ENA]
¢þ
>WENV182439705
OIJV01001551
[OIJV] human gut metagenome; human gut
629
703
+
His
GTG
[ENA]
¢þ
>WENV182439745
OIJV01008206
[OIJV] human gut metagenome; human gut
639
563
-
Asp
GTC
[ENA]
¢þ
>WENV182439732
OIJV01005031
[OIJV] human gut metagenome; human gut
642
569
-
Ala
CGC
[ENA]
¢þ
>WENV182439722
OIJV01004471
[OIJV] human gut metagenome; human gut
659
733
+
Arg
TCT
[ENA]
¢þ
>WENV182439681
OIJV01000303
[OIJV] human gut metagenome; human gut
671
744
+
Trp
CCA
[ENA]
¢þ
>WENV182439709
OIJV01001776
[OIJV] human gut metagenome; human gut
686
757
+
Thr
GGT
[ENA]
¢þ
>WENV182439730
OIJV01004728
[OIJV] human gut metagenome; human gut
710
617
-
Ser
GCT
[ENA]
¢þ
>WENV182439731
OIJV01005016
[OIJV] human gut metagenome; human gut
739
656
-
Tyr
GTA
[ENA]
¢þ
>WENV182439696
OIJV01001401
[OIJV] human gut metagenome; human gut
763
848
+
Ser
TGA
[ENA]
¢þ
>WENV182439706
OIJV01001551
[OIJV] human gut metagenome; human gut
771
842
+
Gln
TTG
[ENA]
¢þ
>WENV182439719
OIJV01003890
[OIJV] human gut metagenome; human gut
774
858
+
Leu
CAA
[ENA]
¢þ
>WENV182439687
OIJV01000518
[OIJV] human gut metagenome; human gut
809
900
+
Ser
CGA
[ENA]
¢þ
>WENV182439670
OIJV01000058
[OIJV] human gut metagenome; human gut
814
742
-
Glu
CTC
[ENA]
¢þ
>WENV182439694
OIJV01001237
[OIJV] human gut metagenome; human gut
817
893
+
Arg
CCG
[ENA]
¢þ
>WENV182439729
OIJV01004728
[OIJV] human gut metagenome; human gut
831
744
-
Ser
TGA
[ENA]
¢þ
>WENV182439707
OIJV01001551
[OIJV] human gut metagenome; human gut
859
933
+
Lys
TTT
[ENA]
¢þ
>WENV182439668
OIJV01000055
[OIJV] human gut metagenome; human gut
901
976
+
Pro
TGG
[ENA]
¢þ
>WENV182439718
OIJV01003224
[OIJV] human gut metagenome; human gut
916
841
-
Arg
ACG
[ENA]
¢þ
>WENV182439712
OIJV01002006
[OIJV] human gut metagenome; human gut
994
1069
+
Trp
CCA
[ENA]
¢þ
>WENV182439669
OIJV01000055
[OIJV] human gut metagenome; human gut
995
1065
+
Gly
TCC
[ENA]
¢þ
>WENV182439693
OIJV01001217
[OIJV] human gut metagenome; human gut
1014
941
-
Ile
GAT
[ENA]
¢þ
>WENV182439716
OIJV01002890
[OIJV] human gut metagenome; human gut
1018
935
-
Leu
CAA
[ENA]
¢þ
>WENV182439717
OIJV01003224
[OIJV] human gut metagenome; human gut
1052
967
-
Leu
TAA
[ENA]
¢þ
>WENV182439711
OIJV01001976
[OIJV] human gut metagenome; human gut
1156
1235
+
Leu
CAA
[ENA]
¢þ
>WENV182439665
OIJV01000027
[OIJV] human gut metagenome; human gut
1210
1136
-
Met
CAT
[ENA]
¢þ
>WENV182439689
OIJV01000628
[OIJV] human gut metagenome; human gut
1235
1318
+
Tyr
GTA
[ENA]
¢þ
>WENV182439664
OIJV01000027
[OIJV] human gut metagenome; human gut
1310
1234
-
Val
TAC
[ENA]
¢þ
>WENV182439697
OIJV01001471
[OIJV] human gut metagenome; human gut
1375
1448
+
Gln
CTG
[ENA]
¢þ
>WENV182439685
OIJV01000444
[OIJV] human gut metagenome; human gut
1385
1312
-
Lys
CTT
[ENA]
¢þ
>WENV182439710
OIJV01001923
[OIJV] human gut metagenome; human gut
1398
1326
-
Thr
GGT
[ENA]
¢þ
>WENV182439680
OIJV01000297
[OIJV] human gut metagenome; human gut
1435
1518
+
Leu
CAG
[ENA]
¢þ
>WENV182439708
OIJV01001568
[OIJV] human gut metagenome; human gut
1455
1529
+
Thr
TGT
[ENA]
¢þ
>WENV182439698
OIJV01001471
[OIJV] human gut metagenome; human gut
1477
1552
+
Pro
CGG
[ENA]
¢þ
>WENV182439676
OIJV01000255
[OIJV] human gut metagenome; human gut
1665
1739
+
Ile
GAT
[ENA]
¢þ
>WENV182439677
OIJV01000255
[OIJV] human gut metagenome; human gut
1756
1830
+
Ala
TGC
[ENA]
¢þ
>WENV182439678
OIJV01000262
[OIJV] human gut metagenome; human gut
1770
1686
-
Tyr
GTA
[ENA]
¢þ
>WENV182439688
OIJV01000611
[OIJV] human gut metagenome; human gut
1857
1931
+
Arg
CCG
[ENA]
¢þ
>WENV182439684
OIJV01000346
[OIJV] human gut metagenome; human gut
1910
1837
-
Pro
CGG
[ENA]
¢þ
>WENV182439666
OIJV01000038
[OIJV] human gut metagenome; human gut
1979
2051
+
Thr
CGT
[ENA]
¢þ
>WENV182439690
OIJV01000761
[OIJV] human gut metagenome; human gut
1991
2066
+
Gly
GCC
[ENA]
¢þ
>WENV182439683
OIJV01000346
[OIJV] human gut metagenome; human gut
1996
1923
-
Phe
GAA
[ENA]
¢þ
>WENV182439691
OIJV01000761
[OIJV] human gut metagenome; human gut
2073
2148
+
Val
TAC
[ENA]
¢þ
>WENV182439673
OIJV01000100
[OIJV] human gut metagenome; human gut
3722
3649
-
Pro
CGG
[ENA]
¢þ
>WENV182439672
OIJV01000063
[OIJV] human gut metagenome; human gut
5063
4991
-
Gln
CTG
[ENA]
¢þ
>WENV182439671
OIJV01000063
[OIJV] human gut metagenome; human gut
5157
5071
-
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK