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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OILR] human gut metagenome; human gut
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182449377
OILR01007461
[OILR] human gut metagenome; human gut
5
80
+
Lys
CTT
[ENA]
¢þ
>WENV182449374
OILR01005443
[OILR] human gut metagenome; human gut
10
85
+
Arg
CCT
[ENA]
¢þ
>WENV182449328
OILR01001464
[OILR] human gut metagenome; human gut
28
99
+
Gln
TTG
[ENA]
¢þ
>WENV182449375
OILR01005473
[OILR] human gut metagenome; human gut
30
102
+
Glu
TTC
[ENA]
¢þ
>WENV182449301
OILR01000291
[OILR] human gut metagenome; human gut
40
116
+
Ile
GAT
[ENA]
¢þ
>WENV182449307
OILR01000417
[OILR] human gut metagenome; human gut
105
20
-
Ser
TGA
[ENA]
¢þ
>WENV182449362
OILR01003541
[OILR] human gut metagenome; human gut
105
193
+
Ser
CGA
[ENA]
¢þ
>WENV182449359
OILR01003060
[OILR] human gut metagenome; human gut
109
192
+
Leu
TAG
[ENA]
¢þ
>WENV182449340
OILR01001488
[OILR] human gut metagenome; human gut
113
39
-
Gln
TTG
[ENA]
¢þ
>WENV182449310
OILR01000515
[OILR] human gut metagenome; human gut
116
188
+
Arg
CCT
[ENA]
¢þ
>WENV182449366
OILR01004180
[OILR] human gut metagenome; human gut
129
55
-
Glu
CTC
[ENA]
¢þ
>WENV182449378
OILR01007804
[OILR] human gut metagenome; human gut
136
218
+
Tyr
GTA
[ENA]
¢þ
>WENV182449351
OILR01002055
[OILR] human gut metagenome; human gut
138
213
+
Ala
GGC
[ENA]
¢þ
>WENV182449319
OILR01001005
[OILR] human gut metagenome; human gut
142
70
-
Cys
GCA
[ENA]
¢þ
>WENV182449376
OILR01006479
[OILR] human gut metagenome; human gut
164
240
+
Ile2
CAT
[ENA]
¢þ
>WENV182449302
OILR01000291
[OILR] human gut metagenome; human gut
167
242
+
Ala
TGC
[ENA]
¢þ
>WENV182449357
OILR01002610
[OILR] human gut metagenome; human gut
172
96
-
Met
CAT
[ENA]
¢þ
>WENV182449370
OILR01004785
[OILR] human gut metagenome; human gut
174
98
-
Arg
TCT
[ENA]
¢þ
>WENV182449311
OILR01000610
[OILR] human gut metagenome; human gut
182
256
+
Ile
GAT
[ENA]
¢þ
>WENV182449371
OILR01004860
[OILR] human gut metagenome; human gut
213
289
+
Arg
CCT
[ENA]
¢þ
>WENV182449352
OILR01002055
[OILR] human gut metagenome; human gut
222
297
+
Glu
TTC
[ENA]
¢þ
>WENV182449363
OILR01003541
[OILR] human gut metagenome; human gut
224
316
+
Ser
GCT
[ENA]
¢þ
>WENV182449339
OILR01001488
[OILR] human gut metagenome; human gut
238
155
-
Leu
TAG
[ENA]
¢þ
>WENV182449369
OILR01004785
[OILR] human gut metagenome; human gut
253
178
-
Pro
TGG
[ENA]
¢þ
>WENV182449312
OILR01000610
[OILR] human gut metagenome; human gut
273
347
+
Ala
TGC
[ENA]
¢þ
>WENV182449372
OILR01004883
[OILR] human gut metagenome; human gut
326
402
+
Val
GAC
[ENA]
¢þ
>WENV182449338
OILR01001488
[OILR] human gut metagenome; human gut
329
254
-
Thr
TGT
[ENA]
¢þ
>WENV182449356
OILR01002610
[OILR] human gut metagenome; human gut
333
257
-
Ile
GAT
[ENA]
¢þ
>WENV182449373
OILR01005275
[OILR] human gut metagenome; human gut
352
427
+
Val
TAC
[ENA]
¢þ
>WENV182449337
OILR01001488
[OILR] human gut metagenome; human gut
414
338
-
Asp
GTC
[ENA]
¢þ
>WENV182449313
OILR01000660
[OILR] human gut metagenome; human gut
433
358
-
Gly
GCC
[ENA]
¢þ
>WENV182449367
OILR01004331
[OILR] human gut metagenome; human gut
459
368
-
Ser
CGA
[ENA]
¢þ
>WENV182449364
OILR01003812
[OILR] human gut metagenome; human gut
459
546
+
Ser
GCT
[ENA]
¢þ
>WENV182449336
OILR01001488
[OILR] human gut metagenome; human gut
498
423
-
Val
TAC
[ENA]
¢þ
>WENV182449320
OILR01001082
[OILR] human gut metagenome; human gut
528
604
+
Val
GAC
[ENA]
¢þ
>WENV182449361
OILR01003469
[OILR] human gut metagenome; human gut
548
623
+
Pro
TGG
[ENA]
¢þ
>WENV182449342
OILR01001632
[OILR] human gut metagenome; human gut
558
486
-
Arg
CCT
[ENA]
¢þ
>WENV182449286
OILR01000020
[OILR] human gut metagenome; human gut
563
489
-
Ile2
CAT
[ENA]
¢þ
>WENV182449335
OILR01001488
[OILR] human gut metagenome; human gut
584
509
-
Phe
GAA
[ENA]
¢þ
>WENV182449368
OILR01004335
[OILR] human gut metagenome; human gut
588
664
+
Asn
GTT
[ENA]
¢þ
>WENV182449309
OILR01000465
[OILR] human gut metagenome; human gut
653
571
-
Leu
TAG
[ENA]
¢þ
>WENV182449343
OILR01001647
[OILR] human gut metagenome; human gut
662
752
+
Ser
GGA
[ENA]
¢þ
>WENV182449334
OILR01001488
[OILR] human gut metagenome; human gut
681
598
-
Ser
TGA
[ENA]
¢þ
>WENV182449305
OILR01000351
[OILR] human gut metagenome; human gut
717
644
-
Phe
GAA
[ENA]
¢þ
>WENV182449355
OILR01002599
[OILR] human gut metagenome; human gut
756
830
+
Asn
GTT
[ENA]
¢þ
>WENV182449365
OILR01004062
[OILR] human gut metagenome; human gut
757
683
-
Pro
GGG
[ENA]
¢þ
>WENV182449333
OILR01001488
[OILR] human gut metagenome; human gut
757
683
-
Glu
TTC
[ENA]
¢þ
>WENV182449316
OILR01000802
[OILR] human gut metagenome; human gut
758
684
-
Ala
GGC
[ENA]
¢þ
>WENV182449344
OILR01001873
[OILR] human gut metagenome; human gut
781
857
+
Pro
TGG
[ENA]
¢þ
>WENV182449360
OILR01003193
[OILR] human gut metagenome; human gut
821
747
-
Thr
TGT
[ENA]
¢þ
>WENV182449288
OILR01000054
[OILR] human gut metagenome; human gut
826
752
-
Thr
TGT
[ENA]
¢þ
>WENV182449353
OILR01002244
[OILR] human gut metagenome; human gut
827
900
+
Gly
CCC
[ENA]
¢þ
>WENV182449332
OILR01001488
[OILR] human gut metagenome; human gut
840
765
-
Lys
CTT
[ENA]
¢þ
>WENV182449314
OILR01000661
[OILR] human gut metagenome; human gut
845
928
+
Tyr
GTA
[ENA]
¢þ
>WENV182449358
OILR01002832
[OILR] human gut metagenome; human gut
875
800
-
Lys
CTT
[ENA]
¢þ
>WENV182449345
OILR01001873
[OILR] human gut metagenome; human gut
889
965
+
Arg
TCT
[ENA]
¢þ
>WENV182449289
OILR01000069
[OILR] human gut metagenome; human gut
909
981
+
fMet
CAT
[ENA]
¢þ
>WENV182449347
OILR01001890
[OILR] human gut metagenome; human gut
919
1001
+
Leu
TAG
[ENA]
¢þ
>WENV182449331
OILR01001488
[OILR] human gut metagenome; human gut
924
849
-
Gly
TCC
[ENA]
¢þ
>WENV182449348
OILR01001951
[OILR] human gut metagenome; human gut
930
1014
+
Leu
GAG
[ENA]
¢þ
>WENV182449354
OILR01002578
[OILR] human gut metagenome; human gut
976
888
-
Ser
GGA
[ENA]
¢þ
>WENV182449346
OILR01001873
[OILR] human gut metagenome; human gut
978
1053
+
His
GTG
[ENA]
¢þ
>WENV182449350
OILR01001987
[OILR] human gut metagenome; human gut
996
921
-
Val
TAC
[ENA]
¢þ
>WENV182449349
OILR01001951
[OILR] human gut metagenome; human gut
1021
1098
+
Gln
CTG
[ENA]
¢þ
>WENV182449315
OILR01000661
[OILR] human gut metagenome; human gut
1022
1094
+
Thr
GGT
[ENA]
¢þ
>WENV182449330
OILR01001488
[OILR] human gut metagenome; human gut
1025
949
-
fMet
CAT
[ENA]
¢þ
>WENV182449326
OILR01001356
[OILR] human gut metagenome; human gut
1029
956
-
fMet
CAT
[ENA]
¢þ
>WENV182449317
OILR01000812
[OILR] human gut metagenome; human gut
1096
1171
+
Lys
TTT
[ENA]
¢þ
>WENV182449321
OILR01001127
[OILR] human gut metagenome; human gut
1113
1188
+
Thr
TGT
[ENA]
¢þ
>WENV182449325
OILR01001356
[OILR] human gut metagenome; human gut
1119
1035
-
Tyr
GTA
[ENA]
¢þ
>WENV182449329
OILR01001488
[OILR] human gut metagenome; human gut
1120
1033
-
Leu
TAA
[ENA]
¢þ
>WENV182449322
OILR01001159
[OILR] human gut metagenome; human gut
1124
1053
-
Gln
CTG
[ENA]
¢þ
>WENV182449327
OILR01001402
[OILR] human gut metagenome; human gut
1181
1257
+
Ile2
CAT
[ENA]
¢þ
>WENV182449341
OILR01001572
[OILR] human gut metagenome; human gut
1185
1108
-
Gln
TTG
[ENA]
¢þ
>WENV182449324
OILR01001356
[OILR] human gut metagenome; human gut
1198
1123
-
Thr
TGT
[ENA]
¢þ
>WENV182449306
OILR01000393
[OILR] human gut metagenome; human gut
1268
1194
-
Glu
TTC
[ENA]
¢þ
>WENV182449323
OILR01001289
[OILR] human gut metagenome; human gut
1429
1501
+
Arg
CCG
[ENA]
¢þ
>WENV182449299
OILR01000217
[OILR] human gut metagenome; human gut
1501
1574
+
Gly
GCC
[ENA]
¢þ
>WENV182449300
OILR01000217
[OILR] human gut metagenome; human gut
1590
1675
+
Leu
TAA
[ENA]
¢þ
>WENV182449287
OILR01000041
[OILR] human gut metagenome; human gut
1624
1698
+
Asp
GTC
[ENA]
¢þ
>WENV182449304
OILR01000330
[OILR] human gut metagenome; human gut
1638
1554
-
Leu
CAA
[ENA]
¢þ
>WENV182449318
OILR01000865
[OILR] human gut metagenome; human gut
1696
1612
-
Tyr
GTA
[ENA]
¢þ
>WENV182449308
OILR01000421
[OILR] human gut metagenome; human gut
1795
1868
+
Trp
CCA
[ENA]
¢þ
>WENV182449295
OILR01000183
[OILR] human gut metagenome; human gut
2142
2217
+
Ala
TGC
[ENA]
¢þ
>WENV182449296
OILR01000183
[OILR] human gut metagenome; human gut
2221
2297
+
Ile
GAT
[ENA]
¢þ
>WENV182449292
OILR01000157
[OILR] human gut metagenome; human gut
2314
2241
-
fMet
CAT
[ENA]
¢þ
>WENV182449303
OILR01000294
[OILR] human gut metagenome; human gut
3169
3240
+
Gln
TTG
[ENA]
¢þ
>WENV182449297
OILR01000211
[OILR] human gut metagenome; human gut
3600
3675
+
His
GTG
[ENA]
¢þ
>WENV182449294
OILR01000172
[OILR] human gut metagenome; human gut
3622
3534
-
Ser
GGA
[ENA]
¢þ
>WENV182449298
OILR01000214
[OILR] human gut metagenome; human gut
3920
4005
+
Ser
TGA
[ENA]
¢þ
>WENV182449291
OILR01000100
[OILR] human gut metagenome; human gut
3983
3910
-
Pro
CGG
[ENA]
¢þ
>WENV182449290
OILR01000100
[OILR] human gut metagenome; human gut
4177
4250
+
Phe
GAA
[ENA]
¢þ
>WENV182449293
OILR01000164
[OILR] human gut metagenome; human gut
4341
4414
+
Thr
CGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK